Factsheet for Bra014778.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, cytosol

Predictor Summary:

nucleus 2
mitochondrion 2
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX76124	Canola	mitochondrion	97.64	99.73
Bra007131.1-P	Field mustard	mitochondrion	91.62	90.44
AT3G55050.2	Thale cress	mitochondrion	87.17	86.72
Bra034749.1-P	Field mustard	cytosol, mitochondrion, plastid	73.82	72.68
Bra038738.1-P	Field mustard	cytosol, mitochondrion, plastid	72.77	71.83
VIT_13s0067g03500.t01	Wine grape	cytosol, mitochondrion, plastid	69.11	69.66
Solyc05g055980.2.1	Tomato	cytosol	56.02	68.15
PGSC0003DMT400060005	Potato	cytosol	67.54	67.19
KRH36281	Soybean	mitochondrion	67.8	66.58
KRG93033	Soybean	mitochondrion	67.54	66.49
GSMUA_Achr10P...	Banana	cytosol	65.18	66.22
GSMUA_Achr6P23480_001	Banana	cytosol	57.59	65.87
GSMUA_Achr6P15470_001	Banana	mitochondrion	63.61	64.12
HORVU3Hr1G114160.1	Barley	mitochondrion	51.57	63.34
Os01t0976700-01	Rice	mitochondrion	61.78	62.77
TraesCS3A01G538500.1	Wheat	mitochondrion	63.09	62.44
TraesCS3B01G604000.1	Wheat	mitochondrion	62.83	62.18
TraesCS3D01G544100.1	Wheat	mitochondrion	62.83	62.18
Bra038895.1-P	Field mustard	plastid	62.04	62.04
Bra028865.1-P	Field mustard	mitochondrion	58.12	61.67
Bra005755.1-P	Field mustard	cytosol	57.59	61.62
Bra009569.1-P	Field mustard	mitochondrion	58.38	61.43
HORVU3Hr1G117670.6	Barley	mitochondrion	63.09	61.01
Bra010741.1-P	Field mustard	plastid	60.47	60.79
Bra033566.1-P	Field mustard	cytosol, nucleus, plastid	60.73	58.44
Bra021218.1-P	Field mustard	plastid	56.02	56.61
TraesCS7A01G386400.1	Wheat	cytosol	19.63	53.57
HORVU2Hr1G009490.1	Barley	mitochondrion	20.68	50.0
Bra036972.1-P	Field mustard	mitochondrion	48.43	49.47
Bra028720.1-P	Field mustard	mitochondrion	49.48	49.22
Bra034592.1-P	Field mustard	mitochondrion	47.64	47.27
Bra036813.1-P	Field mustard	vacuole	60.73	46.49
Bra009224.1-P	Field mustard	cytosol, mitochondrion	40.84	45.22
Bra022166.1-P	Field mustard	cytosol	20.94	34.33
Bra015596.1-P	Field mustard	endoplasmic reticulum, plasma membrane	20.68	29.48
Bra030695.1-P	Field mustard	cytosol, nucleus, peroxisome	29.84	19.69
Bra041012.1-P	Field mustard	nucleus	31.41	17.7
Bra029766.1-P	Field mustard	nucleus	29.32	17.39
Bra001308.1-P	Field mustard	nucleus	30.89	17.25
Bra004495.1-P	Field mustard	cytosol, nucleus, peroxisome	34.03	15.29
Bra017322.1-P	Field mustard	nucleus	29.32	15.18
Bra009593.1-P	Field mustard	nucleus	31.41	14.93
Bra005350.1-P	Field mustard	mitochondrion, plastid	28.8	14.77

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.4	Gene3D:3.60.40.10	EnsemblPlantsGene:Bra014778	EnsemblPlants:Bra014778.1
EnsemblPlants:Bra014778.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0004721	GO:GO:0004722	GO:GO:0005488
GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787
GO:GO:0019538	GO:GO:0043169	GO:GO:0046872	InterPro:IPR001932	InterPro:IPR036457	UniProt:M4DE59
PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032
PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF358	SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI0002544CF7
SEG:seg	:	:	:	:	:

Description

AT3G55050 (E=1e-181) | serine/threonine protein phosphatase 2C (PP2C6)

Coordinates

chrA04:+:3033976..3035211

Molecular Weight (calculated)

42493.8 Da

IEP (calculated)

6.951

GRAVY (calculated)

-0.223

Length

382 amino acids

Sequence
(BLAST)

001: MVSTTFRRIV TPCWRPFGVG EGSVPDDDGN GRLDGLLWYK DSGNHLTGEF SMAVVQANAL LEDHSQLESG PVSFDESGPE ATFVGVYDGH GGPEAARFVN
101: ERLFYNMRRC ASEQRGVSPD VITRAFVATE EEFLGLVQEQ WRTRPQLASV GACCLVGVVC NGLLYVANAG DSRVVLGRLQ SPFKEMKAVQ LSSEHNASVE
201: SVRDELRLLH PNDPNIVVLK HKVWRVKGII QVSRSIGDAY LKRAEFNQEP LLPKFRVAER FEKPIMRAEP TITVHKIHPE DQFLIFASDG LWEHLSNQEA
301: VDIVNSCPRN GVARRLVKAA LQVAAKKREM RYSDLEKIEP GIRRHFHDDI TVIVVFLHSA NLGIRTPVSV RGGGELSGNA IF

Best Arabidopsis Sequence Match ( AT3G55050.2 )
(BLAST)

001: MVSTTFRRIV SPCWRPFGIG EDSSPGSDDT NGRLDGLLWY KDSGNHITGE FSMAVVQANN LLEDHSQLES GPISLHESGP EATFVGVYDG HGGPEAARFV
101: NDRLFYNIKR YTSEQRGMSP DVITRGFVAT EEEFLGLVQE QWKTKPQIAS VGACCLVGIV CNGLLYVANA GDSRVVLGKV ANPFKELKAV QLSTEHNASI
201: ESVREELRLL HPDDPNIVVL KHKVWRVKGI IQVSRSIGDA YLKRAEFNQE PLLPKFRVPE RFEKPIMRAE PTITVHKIHP EDQFLIFASD GLWEHLSNQE
301: AVDIVNSCPR NGVARKLVKA ALQEAAKKRE MRYSDLEKIE RGIRRHFHDD ITVIVVFLHA TNFATRTPIS VKGGGLLSAH NPVL

Arabidopsis Description

PP2C6Probable protein phosphatase 2C 48 [Source:UniProtKB/Swiss-Prot;Acc:Q94CL8]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.