Factsheet for Bra021218.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 4
cytosol 1
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY34992	Canola	cytosol, plastid, vacuole	99.74	99.74
CDY39026	Canola	cytosol, plastid, vacuole	99.74	99.74
AT3G17090.1	Thale cress	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	92.06	90.62
VIT_05s0077g00830.t01	Wine grape	extracellular	75.93	77.57
KRH02370	Soybean	cytosol, extracellular, plastid	72.75	73.33
KRH50715	Soybean	mitochondrion, peroxisome, plastid	72.49	73.26
PGSC0003DMT400067223	Potato	mitochondrion	70.9	71.66
KRH11926	Soybean	cytosol	70.37	71.51
KRH36962	Soybean	cytosol	70.63	71.39
GSMUA_Achr11P...	Banana	mitochondrion	70.9	70.9
GSMUA_Achr2P02070_001	Banana	mitochondrion	66.4	67.47
HORVU5Hr1G116740.1	Barley	cytosol, peroxisome	49.47	65.38
Solyc06g065920.2.1	Tomato	nucleus	63.76	64.44
Zm00001d034738_P001	Maize	mitochondrion	61.38	61.21
EER90579	Sorghum	cytosol, mitochondrion, peroxisome, plastid	61.38	60.73
Os03t0832400-01	Rice	plasma membrane	61.11	59.84
HORVU4Hr1G020150.2	Barley	peroxisome	50.0	59.62
TraesCS4A01G363400.1	Wheat	mitochondrion	59.26	58.79
TraesCS5D01G510100.1	Wheat	plastid	58.99	57.92
TraesCS5B01G510000.1	Wheat	cytosol, mitochondrion	58.47	57.85
Bra010741.1-P	Field mustard	plastid	56.35	56.05
Bra014778.1-P	Field mustard	cytosol, mitochondrion, plastid	56.61	56.02
Bra007131.1-P	Field mustard	mitochondrion	56.35	55.04
Bra033566.1-P	Field mustard	cytosol, nucleus, plastid	56.88	54.16
Bra038738.1-P	Field mustard	cytosol, mitochondrion, plastid	54.23	52.97
Bra038895.1-P	Field mustard	plastid	53.44	52.88
Bra034749.1-P	Field mustard	cytosol, mitochondrion, plastid	54.23	52.84
Bra009569.1-P	Field mustard	mitochondrion	50.53	52.62
Bra028865.1-P	Field mustard	mitochondrion	49.74	52.22
Bra005755.1-P	Field mustard	cytosol	48.94	51.82
Bra036972.1-P	Field mustard	mitochondrion	48.68	49.2
Bra028720.1-P	Field mustard	mitochondrion	49.21	48.44
Bra034592.1-P	Field mustard	mitochondrion	48.94	48.05
Bra009224.1-P	Field mustard	cytosol, mitochondrion	41.53	45.51
TraesCS5A01G478600.1	Wheat	cytosol	38.62	41.48
Bra036813.1-P	Field mustard	vacuole	52.65	39.88
Bra022166.1-P	Field mustard	cytosol	19.58	31.76
Bra015596.1-P	Field mustard	endoplasmic reticulum, plasma membrane	19.58	27.61
TraesCS3B01G094100.1	Wheat	cytosol	53.44	26.27
Bra030695.1-P	Field mustard	cytosol, nucleus, peroxisome	27.78	18.13
Bra029766.1-P	Field mustard	nucleus	28.57	16.77
Bra001308.1-P	Field mustard	nucleus	29.89	16.52
Bra041012.1-P	Field mustard	nucleus	28.31	15.78
Bra005350.1-P	Field mustard	mitochondrion, plastid	27.78	14.09
Bra017322.1-P	Field mustard	nucleus	27.25	13.96
Bra009593.1-P	Field mustard	nucleus	29.37	13.81
Bra004495.1-P	Field mustard	cytosol, nucleus, peroxisome	29.63	13.18

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.4	Gene3D:3.60.40.10	EnsemblPlantsGene:Bra021218	EnsemblPlants:Bra021218.1
EnsemblPlants:Bra021218.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0004721	GO:GO:0004722	GO:GO:0005488
GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787
GO:GO:0019538	GO:GO:0043169	GO:GO:0046872	InterPro:IPR001932	InterPro:IPR036457	UniProt:M4DXH2
PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032
PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF325	SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI0002543807
SEG:seg	:	:	:	:	:

Description

AT3G17090 (E=3e-197) | protein phosphatase 2C family protein / PP2C family protein

Coordinates

chrA01:-:23294316..23296117

Molecular Weight (calculated)

42004.0 Da

IEP (calculated)

7.244

GRAVY (calculated)

-0.292

Length

378 amino acids

Sequence
(BLAST)

001: MSGSLMNLLS LCFKPFGQTF DSSESGSGGG GGSEGKDGLL WFRDLGKYRG GEFSMAVIQA NQVLEDQSQI ESGNFGTFVG VYDGHGGPEA ARYVCDNLFN
101: RFREISAETQ GVVTRETIER AFHATEEGFA SIVSELWSTM PNLATVGTCC LVGVIYQSTL FVASLGDSRV VLGKKSNCGG LSAIQLSSEH NANNEDIRWE
201: LKDLHPDDPQ IVVFRHGVWR VKGIIQVSRS IGDMYMKRPE FNREPIAQKF RIAEPMKRPL MSATPTILSH PLHPNDSFLI FASDGLWEHL SNEKAVEIVH
301: SHPRAGSAKR LIKAALQEAA RKREMRYSDL RKIDKKVRRH FHDDITVIVV FLNHDLIARG HMNTTQDSAL SVRSALEH

Best Arabidopsis Sequence Match ( AT3G17090.1 )
(BLAST)

001: MSGSLMNLFS LCFKPFGHVC DNSEAGSGGG GGVSGGTGGE GKDGLLWFRD LGKYCGGDFS MAVIQANQVL EDQSQVESGN FGTFVGVYDG HGGPEAARYV
101: CDHLFNHFRE ISAETQGVVT RETIERAFHA TEEGFASIVS ELWQEIPNLA TVGTCCLVGV IYQNTLFVAS LGDSRVVLGK KGNCGGLSAI QLSTEHNANN
201: EDIRWELKDL HPDDPQIVVF RHGVWRVKGI IQVSRSIGDM YMKRPEFNKE PISQKFRIAE PMKRPLMSAT PTILSHPLHP NDSFLIFASD GLWEHLTNEK
301: AVEIVHNHPR AGSAKRLIKA ALHEAARKRE MRYSDLRKID KKVRRHFHDD ITVIVVFLNH DLISRGHINS TQDTTVSIRS ALEH

Arabidopsis Description

Probable protein phosphatase 2C 42 [Source:UniProtKB/Swiss-Prot;Acc:Q0V7V2]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.