CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, vacuole, cytosol

Predictor Summary:

nucleus 1
plastid 2
cytosol 1
mitochondrion 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid, vacuole
Any Predictor:	cytosol, nucleus, plastid, vacuole
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY34992	Canola	cytosol, plastid, vacuole	100.0	100.0
Bra021218.1-P	Field mustard	plastid	99.74	99.74
CDX75902	Canola	plastid	92.33	92.57
AT3G17090.1	Thale cress	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	92.33	90.89
VIT_05s0077g00830.t01	Wine grape	extracellular	75.66	77.3
KRH02370	Soybean	cytosol, extracellular, plastid	72.75	73.33
KRH50715	Soybean	mitochondrion, peroxisome, plastid	72.49	73.26
PGSC0003DMT400067223	Potato	mitochondrion	71.16	71.93
KRH11926	Soybean	cytosol	70.37	71.51
KRH36962	Soybean	cytosol	70.63	71.39
GSMUA_Achr11P...	Banana	mitochondrion	70.9	70.9
GSMUA_Achr2P02070_001	Banana	mitochondrion	66.4	67.47
HORVU5Hr1G116740.1	Barley	cytosol, peroxisome	49.47	65.38
Solyc06g065920.2.1	Tomato	nucleus	64.02	64.71
Zm00001d034738_P001	Maize	mitochondrion	61.11	60.95
EER90579	Sorghum	cytosol, mitochondrion, peroxisome, plastid	61.11	60.47
Os03t0832400-01	Rice	plasma membrane	61.11	59.84
HORVU4Hr1G020150.2	Barley	peroxisome	50.0	59.62
TraesCS4A01G363400.1	Wheat	mitochondrion	58.99	58.53
TraesCS5D01G510100.1	Wheat	plastid	58.73	57.66
TraesCS5B01G510000.1	Wheat	cytosol, mitochondrion	58.2	57.59
CDX76124	Canola	mitochondrion	56.61	57.22
CDY02904	Canola	mitochondrion	56.08	56.68
CDX90277	Canola	cytosol, mitochondrion, nucleus	56.61	56.32
CDY12086	Canola	cytosol, mitochondrion, nucleus	55.82	55.53
CDY51441	Canola	mitochondrion	56.35	55.04
CDX73413	Canola	mitochondrion	56.35	55.04
CDY54807	Canola	nucleus, peroxisome, plastid	55.82	54.1
CDY52665	Canola	cytosol	54.23	54.09
CDY08420	Canola	cytosol, mitochondrion, plastid	54.23	54.09
CDY42159	Canola	cytosol	53.97	53.83
CDX70348	Canola	cytosol, mitochondrion	51.06	53.17
CDY16313	Canola	extracellular	52.91	53.05
CDY50535	Canola	cytosol, mitochondrion, plastid	54.23	52.97
CDY33283	Canola	plastid	53.44	52.88
CDX73725	Canola	vacuole	52.65	52.79
CDY70696	Canola	extracellular, peroxisome	44.97	52.47
CDY10428	Canola	mitochondrion	50.26	52.34
CDY04862	Canola	cytosol, mitochondrion, plastid	49.74	52.22
CDY11224	Canola	cytosol	49.21	52.1
CDY55405	Canola	cytosol, nucleus, plastid	50.0	51.22
CDX80837	Canola	cytosol, mitochondrion	48.68	50.55
CDY49385	Canola	mitochondrion	48.41	48.93
CDX72438	Canola	mitochondrion	48.41	48.93
CDY14069	Canola	cytosol, mitochondrion	50.53	48.85
CDY05001	Canola	cytosol, mitochondrion	50.0	48.34
CDY28332	Canola	mitochondrion	48.68	47.92
CDY51944	Canola	mitochondrion	48.68	47.79
CDX70071	Canola	cytosol, mitochondrion	48.15	47.52
CDX98953	Canola	cytosol, mitochondrion	47.88	47.26
CDY40818	Canola	mitochondrion	14.81	44.44
CDY29015	Canola	cytosol	41.53	43.61
TraesCS5A01G478600.1	Wheat	cytosol	38.62	41.48
CDX78002	Canola	vacuole	52.65	39.88
CDY51276	Canola	mitochondrion	7.67	34.94
CDY40354	Canola	cytosol	20.63	32.37
TraesCS3B01G094100.1	Wheat	cytosol	53.44	26.27
CDY71703	Canola	cytosol	13.23	25.0
CDY43107	Canola	cytosol, nucleus, peroxisome	25.13	19.39
CDX92079	Canola	cytosol, nucleus, peroxisome	25.13	19.15
CDY57256	Canola	cytosol, nucleus, peroxisome	28.84	18.66
CDY71973	Canola	cytosol, nucleus, peroxisome	25.93	18.46
CDY44706	Canola	nucleus	28.57	18.24
CDY41610	Canola	nucleus	28.57	18.18
CDY62569	Canola	nucleus	29.1	17.92
CDY15623	Canola	cytosol, mitochondrion, nucleus, peroxisome	27.51	17.9
CDY71801	Canola	cytosol	25.66	17.8
CDX95140	Canola	cytosol, mitochondrion, nucleus	29.1	17.74
CDY68192	Canola	mitochondrion, nucleus, plastid	25.66	17.17
CDX73980	Canola	nucleus	30.16	17.12
CDY06718	Canola	mitochondrion, plastid	28.57	17.12
CDY59038	Canola	plastid	25.66	16.93
CDY07928	Canola	nucleus	29.63	16.92
CDY31682	Canola	nucleus, plastid	27.78	15.79
CDX84217	Canola	nucleus, plastid	27.25	15.54
CDX80059	Canola	cytosol, nucleus, peroxisome	29.63	13.18
CDY41568	Canola	cytosol, nucleus, peroxisome	29.63	13.16

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.4	Gene3D:3.60.40.10	GO:A0A078HN88	UniProt:A0A078HN88
ProteinID:CDY34992.1	EnsemblPlants:CDY39026	ProteinID:CDY39026	ProteinID:CDY39026.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004721	GO:GO:0004722	GO:GO:0005488	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0043169	GO:GO:0046872
EnsemblPlantsGene:GSBRNA2T00067152001	InterPro:IPR001932	InterPro:IPR036457	PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS
InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF325
SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI0004EB6B42	SEG:seg	:	:

Description

BnaC01g34900DBnaA01g27420D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HN88]

Coordinates

chrLK032438:-:268325..270561

Molecular Weight (calculated)

41974.0 Da

IEP (calculated)

7.244

GRAVY (calculated)

-0.291

Length

378 amino acids

Sequence
(BLAST)

001: MSGSLMNLLS LCFKPFGQTF DSSESGSGGG GGGEGKDGLL WFRDLGKYRG GEFSMAVIQA NQVLEDQSQI ESGNFGTFVG VYDGHGGPEA ARYVCDNLFN
101: RFREISAETQ GVVTRETIER AFHATEEGFA SIVSELWSTM PNLATVGTCC LVGVIYQSTL FVASLGDSRV VLGKKSNCGG LSAIQLSSEH NANNEDIRWE
201: LKDLHPDDPQ IVVFRHGVWR VKGIIQVSRS IGDMYMKRPE FNREPIAQKF RIAEPMKRPL MSATPTILSH PLHPNDSFLI FASDGLWEHL SNEKAVEIVH
301: SHPRAGSAKR LIKAALQEAA RKREMRYSDL RKIDKKVRRH FHDDITVIVV FLNHDLIARG HMNTTQDSAL SVRSALEH

Best Arabidopsis Sequence Match ( AT3G17090.1 )
(BLAST)

001: MSGSLMNLFS LCFKPFGHVC DNSEAGSGGG GGVSGGTGGE GKDGLLWFRD LGKYCGGDFS MAVIQANQVL EDQSQVESGN FGTFVGVYDG HGGPEAARYV
101: CDHLFNHFRE ISAETQGVVT RETIERAFHA TEEGFASIVS ELWQEIPNLA TVGTCCLVGV IYQNTLFVAS LGDSRVVLGK KGNCGGLSAI QLSTEHNANN
201: EDIRWELKDL HPDDPQIVVF RHGVWRVKGI IQVSRSIGDM YMKRPEFNKE PISQKFRIAE PMKRPLMSAT PTILSHPLHP NDSFLIFASD GLWEHLTNEK
301: AVEIVHNHPR AGSAKRLIKA ALHEAARKRE MRYSDLRKID KKVRRHFHDD ITVIVVFLNH DLISRGHINS TQDTTVSIRS ALEH

Arabidopsis Description

Probable protein phosphatase 2C 42 [Source:UniProtKB/Swiss-Prot;Acc:Q0V7V2]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.