CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, plastid, cytosol

Predictor Summary:

nucleus 2
mitochondrion 3
peroxisome 1
cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d034738_P001	Maize	mitochondrion	95.03	95.78
Os03t0832400-01	Rice	plasma membrane	81.41	80.57
HORVU5Hr1G116740.1	Barley	cytosol, peroxisome	59.42	79.37
TraesCS4A01G363400.1	Wheat	mitochondrion	77.23	77.43
TraesCS5D01G510100.1	Wheat	plastid	77.75	77.14
TraesCS5B01G510000.1	Wheat	cytosol, mitochondrion	76.96	76.96
HORVU4Hr1G020150.2	Barley	peroxisome	59.95	72.24
GSMUA_Achr11P...	Banana	mitochondrion	65.44	66.14
VIT_05s0077g00830.t01	Wine grape	extracellular	63.35	65.41
GSMUA_Achr2P02070_001	Banana	mitochondrion	62.3	63.98
KRH50715	Soybean	mitochondrion, peroxisome, plastid	62.3	63.64
KRH02370	Soybean	cytosol, extracellular, plastid	62.04	63.2
KRH11926	Soybean	cytosol	60.99	62.63
KRH36962	Soybean	cytosol	60.99	62.3
CDX75902	Canola	plastid	60.99	61.8
Bra021218.1-P	Field mustard	plastid	60.73	61.38
CDY34992	Canola	cytosol, plastid, vacuole	60.47	61.11
CDY39026	Canola	cytosol, plastid, vacuole	60.47	61.11
AT3G17090.1	Thale cress	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	60.21	59.9
PGSC0003DMT400067223	Potato	mitochondrion	56.28	57.49
EER95550	Sorghum	mitochondrion, peroxisome, plastid	54.97	52.63
Solyc06g065920.2.1	Tomato	nucleus	51.05	52.14
EER90402	Sorghum	mitochondrion	52.09	51.16
EER94559	Sorghum	cytosol	52.09	50.64
KXG30997	Sorghum	mitochondrion	49.74	48.97
KXG26992	Sorghum	cytosol, mitochondrion	50.0	48.6
KXG37497	Sorghum	mitochondrion	43.46	44.03
EER95306	Sorghum	mitochondrion	41.36	40.31
EES12087	Sorghum	cytosol	25.65	18.81
EES07427	Sorghum	plastid	27.23	17.36
OQU92823	Sorghum	plastid	22.77	16.2
EER90623	Sorghum	plastid	26.7	16.09
EES17579	Sorghum	mitochondrion, peroxisome, plastid	24.35	15.87
EER95099	Sorghum	cytosol, nucleus, peroxisome, plastid	25.39	15.72
OQU92535	Sorghum	nucleus	25.92	11.04

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.4	Gene3D:3.60.40.10	EntrezGene:8080206	UniProt:C5WU10
EnsemblPlants:EER90579	ProteinID:EER90579	ProteinID:EER90579.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004721
GO:GO:0004722	GO:GO:0005488	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0043169	GO:GO:0046872	InterPro:IPR001932
InterPro:IPR036457	PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom
ScanProsite:PS01032	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF325	SMART:SM00332	EnsemblPlantsGene:SORBI_3001G025700
SUPFAM:SSF81606	unigene:Sbi.5424	SignalP:SignalP-noTM	UniParc:UPI0001A825CF	RefSeq:XP_002463581.1	SEG:seg

Description

hypothetical protein

Coordinates

chr1:+:1998516..2001946

Molecular Weight (calculated)

41323.2 Da

IEP (calculated)

7.208

GRAVY (calculated)

-0.162

Length

382 amino acids

Sequence
(BLAST)

001: MLGPLLRLLS ACGGVWPTSP APGAAGAAAS ASSSSGDDSE GRDGLLWWRD LARCHAGDVS VAVAQANQVL EDQCRLDSAP PLGTVVGVFD GHGGPDAARF
101: ACDHLVPNLR EASSGPRGVT ADAIREAFLA TEEGFLALVS SLWEAQPDIA TAGTCCLVGV VHNRTLFVAN LGDSRAVLGK KVGRAGQITA EQLCSEHNAN
201: QEAVRQELKA QHPDDAQIVA LKHGVWRVRG LIQVSRSIGD VYLKHAKYNT ERIKPKFRLS ESFSKPLLSA DPAIISRNLE PNDCFIIFAS DGLWEHLSNQ
301: EAVEIVHNHQ HAGSARRLIK AALQEAARKR EMRYSDLTKI DKKVRRHFHD DITVIVLFIN HDLLLKGAPQ GQPLSIRCAL DY

Best Arabidopsis Sequence Match ( AT3G17090.1 )
(BLAST)

001: MSGSLMNLFS LCFKPFGHVC DNSEAGSGGG GGVSGGTGGE GKDGLLWFRD LGKYCGGDFS MAVIQANQVL EDQSQVESGN FGTFVGVYDG HGGPEAARYV
101: CDHLFNHFRE ISAETQGVVT RETIERAFHA TEEGFASIVS ELWQEIPNLA TVGTCCLVGV IYQNTLFVAS LGDSRVVLGK KGNCGGLSAI QLSTEHNANN
201: EDIRWELKDL HPDDPQIVVF RHGVWRVKGI IQVSRSIGDM YMKRPEFNKE PISQKFRIAE PMKRPLMSAT PTILSHPLHP NDSFLIFASD GLWEHLTNEK
301: AVEIVHNHPR AGSAKRLIKA ALHEAARKRE MRYSDLRKID KKVRRHFHDD ITVIVVFLNH DLISRGHINS TQDTTVSIRS ALEH

Arabidopsis Description

Probable protein phosphatase 2C 42 [Source:UniProtKB/Swiss-Prot;Acc:Q0V7V2]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.