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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 3
  • plastid 1
  • mitochondrion 1
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d029297_P002 Maize nucleus 91.42 85.24
Zm00001d047412_P004 Maize mitochondrion 93.42 83.38
Os03t0372500-03 Rice cytosol, mitochondrion, nucleus, plastid 78.6 72.16
GSMUA_Achr11P... Banana cytosol, peroxisome, plastid 45.48 64.86
GSMUA_Achr8P18740_001 Banana cytosol, nucleus, peroxisome 52.73 63.58
VIT_07s0005g02390.t01 Wine grape mitochondrion, nucleus, peroxisome 54.52 60.3
KRH68360 Soybean cytosol, nucleus, peroxisome 54.18 54.79
KRG96628 Soybean cytosol, nucleus, peroxisome 54.18 54.79
Bra004495.1-P Field mustard cytosol, nucleus, peroxisome 50.84 53.65
CDX80059 Canola cytosol, nucleus, peroxisome 50.84 53.65
CDY41568 Canola cytosol, nucleus, peroxisome 50.5 53.23
AT2G46920.2 Thale cress nucleus 50.61 53.04
EES07427 Sorghum plastid 30.66 45.91
EER90623 Sorghum plastid 30.43 43.06
OQU92823 Sorghum plastid 23.97 40.04
EER95099 Sorghum cytosol, nucleus, peroxisome, plastid 26.09 37.93
EES17579 Sorghum mitochondrion, peroxisome, plastid 24.53 37.54
EES12087 Sorghum cytosol 19.18 33.01
EER95550 Sorghum mitochondrion, peroxisome, plastid 13.38 30.08
EER94559 Sorghum cytosol 12.93 29.52
EER90402 Sorghum mitochondrion 12.71 29.31
KXG37497 Sorghum mitochondrion 11.71 27.85
EER90579 Sorghum cytosol, mitochondrion, peroxisome, plastid 11.04 25.92
KXG26992 Sorghum cytosol, mitochondrion 11.15 25.45
KXG30997 Sorghum mitochondrion 10.93 25.26
EER95306 Sorghum mitochondrion 10.93 25.0
Protein Annotations
KEGG:04658+3.1.3.16KEGG:04660+3.1.3.16MapMan:18.4.24.2.3UniProt:A0A1Z5S9Y2GO:GO:0003674GO:GO:0003824
GO:GO:0004722GO:GO:0005488GO:GO:0005543GO:GO:0005575GO:GO:0005623GO:GO:0005886
GO:GO:0006139GO:GO:0006355GO:GO:0006464GO:GO:0006470GO:GO:0008150GO:GO:0008152
GO:GO:0008289GO:GO:0009058GO:GO:0009987GO:GO:0010074GO:GO:0016020GO:GO:0016787
GO:GO:0019538InterPro:IPR001932InterPro:IPR036457EnsemblPlants:OQU92535ProteinID:OQU92535ProteinID:OQU92535.1
PFAM:PF00481InterPro:PP2CInterPro:PPM-type_dom_sfInterPro:PPM-type_phosphatase_domPFscan:PS51746PANTHER:PTHR13832
PANTHER:PTHR13832:SF301SMART:SM00332EnsemblPlantsGene:SORBI_3001G358800SUPFAM:SSF81606UniParc:UPI000B8BA317SEG:seg
Description
hypothetical protein
Coordinates
chr1:-:64836888..64843327
Molecular Weight (calculated)
99267.4 Da
IEP (calculated)
6.118
GRAVY (calculated)
-0.563
Length
897 amino acids
Sequence
(BLAST)
001: MDSETRSGSF RHEPAAADDL AAAAAGLQRP CRSFGETTFR TISGASVSAN ASSARTGNLT VSLLAGDVQE PAAAFESTAS FAAVPLQPVP RGSGPLNTFL
101: SGPLERGFAS GPLDKGSGFM SGPLDKGAFM SGPIDGGSRS NFSAPLSYGR RKARLGLLVH RISRPMKTAL SRTFSRSSHN PGWVQKFLMH PMAQLPWARD
201: AKSRSEGSQN GLEPGIPEPE YNVTRNLQWA HGKAGEDRVH VVLSEEQGWL FIGIYDGFSG PDAPDFLMSN LYKAIDKELE GLLWVYEDSS ERCDHVSNLE
301: EGESASASVD APHDDNGQFQ SDNGKQEQLG NFGKQNVSPG KGCDESVLQV QPNCTSCEEK DLAAQDSSSQ KLGRDEIVEE MAGADLGNDL QSRESHNSNS
401: GLSGTDLNTS CTCATETSAY CDQHAKFLKE NRKSKRLFEL LEMELLQDYN KRLSKASLEE RKIPSLHVAQ AGTAEGSSRN AAEISRCSLA ATGECFDDSE
501: DLGSSRHADS VLGTDLKECT GCSISTSSSE HKQVTRRFVF GSKLRKMYKK QKMLQKKFFP WNYDWHRDQP HVDESVIKSS EVTRRCKSGP VEHDAVLRAM
601: SRALETTEEA YMEIVEKELD RHPELALMGS CVLVMLMKDQ DVYVMNLGDS RAILAQDNDQ YNSSSFLKGD LRHRNRSRES LVRVELDRIS EESPMHNPNS
701: HLNSNTKAKE LSICRLKMRA VQLSTDHSTS IEEEVLRIKV EHPDDPQAVF NDRVKGQLKV TRAFGAGFLK KPKFNEALLE MFRIDYVGTS PYISCNPAVL
801: HHRLCANDRF LVLSSDGLYQ YFSNDEVVSH VLWFMENVPE GDPAQYLVAE LLCRAAKKNG MNFHELLDIP QGDRRKYHDD VSVMVISLEG RIWRSSG
Best Arabidopsis Sequence Match ( AT2G46920.3 )
(BLAST)
001: MGNGTSRVVG CFVPSNDKNG VDLEFLEPLD EGLGHSFCYV RPSIFESPDI TPSNSERFTI DSSTIDSETL TGSFRNDIVD DPSFLNRHNS KGLAETTFKA
101: ISGASVSANV STARTGNQMA LCSSDVLEPA ASFESTSSFA SIPLQPLPRG GSGPLNGFMS GPLERGFASG PLDRNNGFMS GPIEKGVMSG PLDVSDRSNF
201: SAPLSFRRKK PRFQRFMRSV SGPMKSTLAR TFSRRSGGLS WMHRFFLHPE TRVSWAVGKD GKLHGEDPES CLESNRNLQW AHGKAGEDRV HVVLSEEQGW
301: LFIGIYDGFS GPDAPDFVMS HLYKAIDKEL EGLLWDYEEP SEDNQLQPDQ EPPTEENMCD PESISEQHSK SVVAESEEVM IDDISSLGNT DTQIADGPPG
401: DSAGPGKKSM RLYELLQLEQ WEGEEIGLKR YGGNVALNNM TNQVENPSTS GGGAGNDPCT TDRSALDGIP NSGQRHGTKK SQISSKIRRM YQKQKSLRKK
501: LFPWSYDWHR EEGICVEEKI VESSGPIRRR WSGTVDHDAV LRAMARALES TEEAYMDMVE KSLDINPELA LMGSCVLVML MKDQDVYVMN VGDSRAILAQ
601: ERLHDRHSNP GFGNDEGIGH KSRSRESLVR IELDRISEES PIHNQATPIS VSNKNRDVTS YRLKMRAVQL SSDHSTSVEE EIWRIRSEHP EDDQSILKDR
701: VKGQLKVTRA FGAGFLKKPN FNEALLEMFQ VEYIGTDPYI TCEPCTVHHR LTSSDRFMVL SSDGLYEYFS NEEVVAHVTW FIENVPEGDP AQYLIAELLS
801: RAATKNGMEF HDLLDIPQGD RRKYHDDVSV MVVSLEGRIW RSSGQYYPER KQKFNR
Arabidopsis Description
POLProtein phosphatase 2C 32 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWN7]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.