CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

nucleus 3
peroxisome 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG96628	Soybean	cytosol, nucleus, peroxisome	96.73	96.73
VIT_07s0005g02390.t01	Wine grape	mitochondrion, nucleus, peroxisome	71.25	77.93
GSMUA_Achr11P...	Banana	cytosol, peroxisome, plastid	49.15	69.32
Bra004495.1-P	Field mustard	cytosol, nucleus, peroxisome	64.83	67.65
CDX80059	Canola	cytosol, nucleus, peroxisome	64.83	67.65
CDY41568	Canola	cytosol, nucleus, peroxisome	64.49	67.22
AT2G46920.2	Thale cress	nucleus	64.04	66.36
GSMUA_Achr8P18740_001	Banana	cytosol, nucleus, peroxisome	54.9	65.46
Os03t0372500-03	Rice	cytosol, mitochondrion, nucleus, plastid	62.34	56.6
Zm00001d029297_P002	Maize	nucleus	60.32	55.61
OQU92535	Sorghum	nucleus	54.79	54.18
Zm00001d047412_P004	Maize	mitochondrion	59.98	52.94
KRH04317	Soybean	cytosol, nucleus, plastid	36.3	45.93
KRH58222	Soybean	cytosol, nucleus, peroxisome	35.96	45.83
KRH24796	Soybean	nucleus	36.53	45.0
KRH29800	Soybean	cytosol, nucleus, plastid	36.3	44.72
KRH28277	Soybean	plastid	36.98	44.38
KRH77217	Soybean	plastid	36.75	43.29
KRG99924	Soybean	cytosol, mitochondrion, nucleus, plastid	27.62	41.04
KRH49093	Soybean	cytosol, mitochondrion, nucleus, plastid	27.4	40.37
KRH37115	Soybean	cytosol, nucleus, peroxisome	17.47	37.9
KRH02249	Soybean	cytosol, nucleus, peroxisome	20.97	35.5
KRH50856	Soybean	cytosol, nucleus, peroxisome	20.63	35.19
KRH32367	Soybean	cytosol	13.75	32.88
KRH67612	Soybean	cytosol	13.19	32.77
KRH19775	Soybean	cytosol	13.64	32.61
KRG95894	Soybean	cytosol	13.53	32.43
KRH36281	Soybean	mitochondrion	13.87	31.62
KRH50715	Soybean	mitochondrion, peroxisome, plastid	13.3	31.55
KRH69725	Soybean	mitochondrion	13.98	31.47
KRG90665	Soybean	mitochondrion	13.98	31.23
KRH36089	Soybean	cytosol	13.98	31.23
KRG93033	Soybean	mitochondrion	13.64	31.19
KRH07984	Soybean	mitochondrion	13.75	30.96
KRH02370	Soybean	cytosol, extracellular, plastid	13.08	30.93
KRH28403	Soybean	cytosol	12.74	30.13
KRH77072	Soybean	cytosol	12.74	29.97
KRH35699	Soybean	mitochondrion	12.4	29.1
KRH11926	Soybean	cytosol	12.18	29.03
KRG91074	Soybean	cytosol, mitochondrion	12.06	28.69
KRH36962	Soybean	cytosol	12.06	28.61
KRH71850	Soybean	mitochondrion	11.5	27.87
KRH38102	Soybean	mitochondrion	12.06	27.79
KRG95384	Soybean	mitochondrion	12.18	27.62

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	EntrezGene:100776518	MapMan:18.4.24.2.3	EMBL:ACUP02002107	ncoils:Coil
EnsemblPlantsGene:GLYMA_03G225800	GO:GO:0003674	GO:GO:0003824	GO:GO:0004722	GO:GO:0006464	GO:GO:0006470
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	UniProt:I1JQY9
InterPro:IPR001932	InterPro:IPR036457	EnsemblPlants:KRH68360	ProteinID:KRH68360	ProteinID:KRH68360.1	PFAM:PF00481
InterPro:PP2C	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF301
SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI000294AE46	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr3:+:42801314..42808313

Molecular Weight (calculated)

99454.5 Da

IEP (calculated)

6.393

GRAVY (calculated)

-0.544

Length

887 amino acids

Sequence
(BLAST)

001: MGNGTSRVVG CLMPFNGKSG VDLEFLEPLD EGLGHSFCYV RPSIFESPAI TPSNSERFTV DSSTLDSETL SGSFRHESIE ERPGKNVAET TFKTISGASV
101: SANVSTARTG NQNALLASDV LEPAASFEGT SSFAAIPLQP VPRGSGPLNG FMSGPLERFS SGPLDKGGGF MSGPIEKGVM SGPLDATDKS NFSAPLARGR
201: RRPHLQRLMR SVSGPMRNTF SRTFSRHSMG GSWVQRLFLH PVSQLAWNSK EAKFRQEVSR NCAEVGSSEL EYKHTQNLQW AHGKAGEDRV HVVLSEEQGW
301: LFIGIYDGFS GPDAPDFLMS HLYKFIDKEL EGLLWDYEDN PVDPLKPEVL KNGNDVVALE CDREEMSDAH TISNEESSCC LENSCTVMVK DQSSNSEIVE
401: VNAEVKVNIE QRNCGSPSIV HTDPESVPIG QLSGQGRRSV RLYELLQMES WNEQLLEQGR DSVVPREIAQ ERQMRFCSPD GKEDRSRHPD EGPTTSGQNG
501: GAGFNSTNQV PIAPFSISGQ RQNSRKSFIG TKIRKMYRKQ KSLRKKLFPW SYDWHREETF FDQKLVESSG PIRICKSGVD HNAVLRAMAR ALERTEEEYL
601: KMVENNMDKN PELALMGSCV LVMLMKDQDV YVMNLGDSRA ILAQERPNDR HSNPCLIKDD MRHRNRSREL LVGMELDRIS EESPVHNINK HVNMINKNRE
701: ISVCRLKMRA VQLSTDHSTS IEEEVSRIRA EHPDDNQAIF NDRVKGQLKV TRAFGAGFLK RPSFNEPLLK MFRVDYVGNA PYLSCASSVL HHRLSSSDRF
801: LVLSSDGLYQ FFSNEEVVAH VTWFMENVPE GDPAQYLIAE LLFRAAKKNG MDFHELLDIP HGDRRKYHDD VSVMVVSLEG RIWRSSG

Best Arabidopsis Sequence Match ( AT2G46920.3 )
(BLAST)

001: MGNGTSRVVG CFVPSNDKNG VDLEFLEPLD EGLGHSFCYV RPSIFESPDI TPSNSERFTI DSSTIDSETL TGSFRNDIVD DPSFLNRHNS KGLAETTFKA
101: ISGASVSANV STARTGNQMA LCSSDVLEPA ASFESTSSFA SIPLQPLPRG GSGPLNGFMS GPLERGFASG PLDRNNGFMS GPIEKGVMSG PLDVSDRSNF
201: SAPLSFRRKK PRFQRFMRSV SGPMKSTLAR TFSRRSGGLS WMHRFFLHPE TRVSWAVGKD GKLHGEDPES CLESNRNLQW AHGKAGEDRV HVVLSEEQGW
301: LFIGIYDGFS GPDAPDFVMS HLYKAIDKEL EGLLWDYEEP SEDNQLQPDQ EPPTEENMCD PESISEQHSK SVVAESEEVM IDDISSLGNT DTQIADGPPG
401: DSAGPGKKSM RLYELLQLEQ WEGEEIGLKR YGGNVALNNM TNQVENPSTS GGGAGNDPCT TDRSALDGIP NSGQRHGTKK SQISSKIRRM YQKQKSLRKK
501: LFPWSYDWHR EEGICVEEKI VESSGPIRRR WSGTVDHDAV LRAMARALES TEEAYMDMVE KSLDINPELA LMGSCVLVML MKDQDVYVMN VGDSRAILAQ
601: ERLHDRHSNP GFGNDEGIGH KSRSRESLVR IELDRISEES PIHNQATPIS VSNKNRDVTS YRLKMRAVQL SSDHSTSVEE EIWRIRSEHP EDDQSILKDR
701: VKGQLKVTRA FGAGFLKKPN FNEALLEMFQ VEYIGTDPYI TCEPCTVHHR LTSSDRFMVL SSDGLYEYFS NEEVVAHVTW FIENVPEGDP AQYLIAELLS
801: RAATKNGMEF HDLLDIPQGD RRKYHDDVSV MVVSLEGRIW RSSGQYYPER KQKFNR

Arabidopsis Description

POLProtein phosphatase 2C 32 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWN7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.