CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

nucleus 3
peroxisome 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH04317	Soybean	cytosol, nucleus, plastid	92.24	91.58
KRH28277	Soybean	plastid	71.55	67.39
KRH77217	Soybean	plastid	72.41	66.93
VIT_02s0012g01100.t01	Wine grape	cytosol, nucleus, plastid	73.56	65.06
CDY68192	Canola	mitochondrion, nucleus, plastid	51.29	63.19
CDY59038	Canola	plastid	50.43	61.26
Solyc08g007000.2.1	Tomato	nucleus	68.25	60.82
GSMUA_Achr5P13850_001	Banana	nucleus	52.87	60.53
PGSC0003DMT400045127	Potato	nucleus	69.11	60.28
Solyc08g077150.2.1	Tomato	nucleus	68.82	60.18
PGSC0003DMT400052881	Potato	nucleus	67.24	59.92
CDY31682	Canola	nucleus, plastid	56.47	59.1
CDX84217	Canola	nucleus, plastid	56.03	58.82
Zm00001d019519_P001	Maize	extracellular	10.78	57.69
EES07427	Sorghum	plastid	48.56	56.43
TraesCS6A01G263600.1	Wheat	plastid	48.28	56.28
TraesCS6B01G290600.1	Wheat	plastid	48.28	56.28
TraesCS6D01G251300.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	48.28	56.28
HORVU6Hr1G066850.2	Barley	plastid	48.13	56.11
Bra005350.1-P	Field mustard	mitochondrion, plastid	59.91	55.97
Os02t0690500-01	Rice	plastid	47.84	55.87
Bra017322.1-P	Field mustard	nucleus	59.05	55.69
Zm00001d017670_P001	Maize	plastid	47.84	55.59
AT2G35350.1	Thale cress	nucleus	60.78	54.02
Zm00001d016370_P001	Maize	cytosol, endoplasmic reticulum, peroxisome	18.39	49.04
KRH24796	Soybean	nucleus	44.54	43.06
KRH29800	Soybean	cytosol, nucleus, plastid	44.25	42.78
KRG99924	Soybean	cytosol, mitochondrion, nucleus, plastid	35.63	41.54
KRH49093	Soybean	cytosol, mitochondrion, nucleus, plastid	35.34	40.86
KRH37115	Soybean	cytosol, nucleus, peroxisome	22.41	38.14
KRH68360	Soybean	cytosol, nucleus, peroxisome	45.83	35.96
KRH50856	Soybean	cytosol, nucleus, peroxisome	26.87	35.96
KRG96628	Soybean	cytosol, nucleus, peroxisome	45.55	35.74
KRH02249	Soybean	cytosol, nucleus, peroxisome	26.87	35.69
KRH32367	Soybean	cytosol	17.67	33.15
KRH19775	Soybean	cytosol	17.39	32.61
KRH67612	Soybean	cytosol	16.24	31.65
KRG95894	Soybean	cytosol	16.38	30.81
KRH50715	Soybean	mitochondrion, peroxisome, plastid	16.09	29.95
KRG93033	Soybean	mitochondrion	16.67	29.9
KRH36281	Soybean	mitochondrion	16.52	29.56
KRH69725	Soybean	mitochondrion	16.67	29.44
KRH02370	Soybean	cytosol, extracellular, plastid	15.8	29.33
KRH36089	Soybean	cytosol	16.67	29.22
KRH07984	Soybean	mitochondrion	16.38	28.93
KRG90665	Soybean	mitochondrion	16.38	28.72
KRH11926	Soybean	cytosol	15.23	28.49
KRH71850	Soybean	mitochondrion	14.94	28.42
KRG95384	Soybean	mitochondrion	15.95	28.39
KRH36962	Soybean	cytosol	15.23	28.34
KRH38102	Soybean	mitochondrion	15.37	27.79
KRH35699	Soybean	mitochondrion	15.09	27.78
KRH28403	Soybean	cytosol	14.94	27.73
KRG91074	Soybean	cytosol, mitochondrion	14.8	27.61
KRH77072	Soybean	cytosol	14.8	27.32

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	EntrezGene:100781535	MapMan:18.4.24.2.3	EMBL:ACUP02003233	EnsemblPlantsGene:GLYMA_05G113400
GO:GO:0003674	GO:GO:0003824	GO:GO:0004722	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	UniProt:I1K2K9	InterPro:IPR001932
InterPro:IPR036457	EnsemblPlants:KRH58222	ProteinID:KRH58222	ProteinID:KRH58222.1	PFAM:PF00481	InterPro:PP2C
InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF241	SMART:SM00332
SUPFAM:SSF81606	UniParc:UPI000233969D	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr5:-:30061094..30066533

Molecular Weight (calculated)

76428.3 Da

IEP (calculated)

5.647

GRAVY (calculated)

-0.371

Length

696 amino acids

Sequence
(BLAST)

001: MGSGVSTLCW CSGTNNEPDV IFSATDPLDE TLGHSFCYVR SSARFLSPTH SDRFLSPSTS LRFSPTHTRP EFHETGFKAI SGASVSANSS LPTTVIHLDE
101: EVNGVSSRGN IVNGFESTAS FSALPLQPVP RGGEPFEVSG FFLSGPIEAN AVSGPLPSAA AYGVGGGDVP FSAPLAGLYS KKNKKKVISG FRKTFNRNTP
201: EKKRPWVVPV LNFAGRKESE GRPQQPPQAA AAASNVQWAL GKAGEDRVHV VVSEELGWLF VGIYDGFNGG DAPEFLMGNL YRAVHNELQG LFWELEEEEQ
301: PLPQESNPVV EGTESKRRKL WELLAEDGLD LSGSDRFAFS VDDALSVNNA NAGSAVSRRW LLLSKLKQGL TKQKEGEGRG WNMGNEEKER ENQEKHCGRK
401: RRVGPVDHGL VLSALSRALE VTELAYLDMT DKLLDTNPEL ALMGSCLLVA LMRDEDVYVM NVGDSRAIVA HYEPKEVDSS VELGSKRGVE SGAQSIVEVP
501: LGLGQIGSAQ QKRLVALQLS TDHSTSIEEE VIRIKNEHPD DAQCIVNGRV KGRLKVTRAF GAGFLKQPKW NDAVLEMFRN EFIGTAPYIS CSPSLCHHRL
601: CQRDQFLILS SDGLYQYLNN DEVVSHVESF MEKFPEGDPA QHLIEELLLR AAKKAGMDFH ELLDIPQGDR RKYHDDVTVM VISLEGRIWK SSGKYP

Best Arabidopsis Sequence Match ( AT2G35350.1 )
(BLAST)

001: MGSGFSSLLP CFNQGHRNRR RHSSAANPSH SDLIDSFREP LDETLGHSYC YVPSSSNRFI SPFPSDRFVS PTASFRLSPP HEPGRIRGSG SSEQLHTGFR
101: AISGASVSAN TSNSKTVLQL EDIYDDATES SFGGGVRRSV VNANGFEGTS SFSALPLQPG PDRSGLFMSG PIERGATSGP LDPPAGEISR SNSAGVHFSA
201: PLGGVYSKKR RKKKKKSLSW HPIFGGEKKQ RPWVLPVSNF VVGAKKENIV RPDVEAMAAS SGENDLQWAL GKAGEDRVQL AVFEKQGWLF AGIYDGFNGP
301: DAPEFLMANL YRAVHSELQG LFWELEEEDD NPTDISTREL EQQGEFEDHV NEMASSSCPA TEKEEEEMGK RLTSSLEVVE VKERKRLWEL LAEAQAEDAL
401: DLSGSDRFAF SVDDAIGAGN AVSVGSKRWL LLSKLKQGLS KQGISGRKLF PWKSGVEENE TEEVDNVGVE EGVDKRRKRR KAGTVDHELV LKAMSNGLEA
501: TEQAFLEMTD KVLETNPELA LMGSCLLVAL MRDDDVYIMN IGDSRALVAQ YQVEETGESV ETAERVEERR NDLDRDDGNK EPLVVDSSDS TVNNEAPLPQ
601: TKLVALQLTT DHSTSIEDEV TRIKNEHPDD NHCIVNDRVK GRLKVTRAFG AGFLKQPKLN DALLEMFRNE YIGTDPYISC TPSLRHYRLT ENDQFMVLSS
701: DGLYQYLSNV EVVSLAMEKF PDGDPAQHVI QELLVRAAKK AGMDFHELLD IPQGDRRKYH DDCTVLVIAL GGSRIWKSSG KYL

Arabidopsis Description

PLL1PLL1 [Source:UniProtKB/TrEMBL;Acc:A0A178VV40]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.