Factsheet for Solyc08g007000.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400052881	Potato	nucleus	97.18	97.18
Solyc08g077150.2.1	Tomato	nucleus	81.56	80.03
VIT_02s0012g01100.t01	Wine grape	cytosol, nucleus, plastid	72.09	71.54
KRH58222	Soybean	cytosol, nucleus, peroxisome	60.82	68.25
KRH04317	Soybean	cytosol, nucleus, plastid	61.2	68.19
KRH28277	Soybean	plastid	64.4	68.06
KRH77217	Soybean	plastid	64.92	67.33
CDY68192	Canola	mitochondrion, nucleus, plastid	48.53	67.08
CDY59038	Canola	plastid	48.14	65.62
CDY31682	Canola	nucleus, plastid	54.67	64.21
CDX84217	Canola	nucleus, plastid	53.14	62.59
GSMUA_Achr5P13850_001	Banana	nucleus	47.89	61.51
Bra017322.1-P	Field mustard	nucleus	56.72	60.03
Bra005350.1-P	Field mustard	mitochondrion, plastid	57.11	59.87
AT2G35350.1	Thale cress	nucleus	58.26	58.11
EES07427	Sorghum	plastid	44.05	57.43
TraesCS6D01G251300.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	43.79	57.29
TraesCS6B01G290600.1	Wheat	plastid	43.79	57.29
TraesCS6A01G263600.1	Wheat	plastid	43.79	57.29
HORVU6Hr1G066850.2	Barley	plastid	43.53	56.95
Zm00001d019519_P001	Maize	extracellular	9.48	56.92
Os02t0690500-01	Rice	plastid	43.28	56.71
Zm00001d017670_P001	Maize	plastid	43.28	56.43
Zm00001d016370_P001	Maize	cytosol, endoplasmic reticulum, peroxisome	15.75	47.13
Solyc10g086490.1.1	Tomato	cytosol	35.21	46.14
Solyc09g010780.2.1	Tomato	cytosol	36.62	45.91
Solyc06g076100.2.1	Tomato	nucleus	40.85	45.06
Solyc01g066870.2.1	Tomato	cytosol, nucleus, peroxisome	14.85	36.59
Solyc10g055650.1.1	Tomato	cytosol	14.6	33.63
Solyc05g055980.2.1	Tomato	cytosol	13.19	32.8
Solyc09g007080.2.1	Tomato	cytosol	15.24	31.48
Solyc01g111730.2.1	Tomato	cytosol, mitochondrion, plastid	15.62	31.44
Solyc03g033340.2.1	Tomato	mitochondrion	15.88	31.23
Solyc10g084410.1.1	Tomato	mitochondrion	14.98	31.12
Solyc02g083420.2.1	Tomato	mitochondrion	15.24	30.51
Solyc12g099600.1.1	Tomato	plasma membrane	21.89	29.74
Solyc01g107300.2.1	Tomato	cytosol	8.58	29.26
Solyc02g092750.2.1	Tomato	cytosol	12.93	27.6
Solyc06g065920.2.1	Tomato	nucleus	13.19	27.54
Solyc10g049630.1.1	Tomato	mitochondrion, nucleus	13.32	27.37
Solyc01g107310.2.1	Tomato	mitochondrion	6.4	27.03
Solyc10g078820.1.1	Tomato	mitochondrion	13.96	23.7
Solyc10g078810.1.1	Tomato	cytosol	13.06	23.29
Solyc10g078800.1.1	Tomato	mitochondrion	12.55	7.47

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.3	GO:GO:0003674	GO:GO:0003824	GO:GO:0004722
GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787
GO:GO:0019538	InterPro:IPR001932	InterPro:IPR036457	UniProt:K4CII7	PFAM:PF00481	InterPro:PP2C
InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF241	SMART:SM00332
SUPFAM:SSF81606	EnsemblPlantsGene:Solyc08g007000.2	EnsemblPlants:Solyc08g007000.2.1	UniParc:UPI000276C430	SEG:seg	:

Description

No Description!

Coordinates

chr8:+:1576129..1582322

Molecular Weight (calculated)

86121.1 Da

IEP (calculated)

5.008

GRAVY (calculated)

-0.491

Length

781 amino acids

Sequence
(BLAST)

001: MGGGFSQLFP CLDPAVNRGE PEVIFTGSEP LDETLGHSFC YVRSSARFVS PTNSDRFVSP SQSLRFDEPG RNRLTGSTET GFRAISGASV SANTSTPRTV
101: LQLDNIYDDA TGSDGSVVGF GGGVKGSVVN GFESTSSFSA LPLQPVPRGG EPSGPMERAF FMSGPIERGA LSGPLDAAAS SDGGGGVPFS APLGGAYVKK
201: RRKNGIAGIR KAFYRSFSEK KRPWVVPVRN FIGRKEMTAA GNCTRDSDAG SDSNVQWALG KAGEDRVHVV VSEEHGWLFV GIYDGFNGPD GPEFLMSHLY
301: KAMYKELEGL FWDSEETSNQ EAENAGLENE VITEDSNKPN SNREANPTSR GAEEGGNEVN LEHLDKGSEK KVTFQSGEIV VRRRRLWEYL AEAETEDGLD
401: LSGSDRFAFS VDDALSVNSA GSAVNRRSLL LSKLKHGLLI KHKESKRLFP WKFGLQAKEK VEVGENRVEE RTNRSERRRK VGPVDHELVL RAMSRALEFT
501: ELAYLDMTDK VLDRYPELAL MGSCLLVALM RDEDVYVMNV GDSRAIVAQY EPEEVSSSSE SRGPGNSELA VEGIVEEPVV AGDEENRVID DIPIQDAKLT
601: ALQLSTDHST SIEEEVTRIK NEHPDDSNCI VNDRVKGRLK VTRAFGAGFL KKPKLNEPLL EMFRNEYIGD APYLSCTPSL RHHKLCPRDQ FLVLSSDGLY
701: QYLSNQEVVC HVENFMEKFP DGDPAQHLIE ELLFRAAKKA GMDFHELLDI PQGDRRKYHD DVTVMVVSLE GRIWKSSGKY L

Best Arabidopsis Sequence Match ( AT2G35350.1 )
(BLAST)

001: MGSGFSSLLP CFNQGHRNRR RHSSAANPSH SDLIDSFREP LDETLGHSYC YVPSSSNRFI SPFPSDRFVS PTASFRLSPP HEPGRIRGSG SSEQLHTGFR
101: AISGASVSAN TSNSKTVLQL EDIYDDATES SFGGGVRRSV VNANGFEGTS SFSALPLQPG PDRSGLFMSG PIERGATSGP LDPPAGEISR SNSAGVHFSA
201: PLGGVYSKKR RKKKKKSLSW HPIFGGEKKQ RPWVLPVSNF VVGAKKENIV RPDVEAMAAS SGENDLQWAL GKAGEDRVQL AVFEKQGWLF AGIYDGFNGP
301: DAPEFLMANL YRAVHSELQG LFWELEEEDD NPTDISTREL EQQGEFEDHV NEMASSSCPA TEKEEEEMGK RLTSSLEVVE VKERKRLWEL LAEAQAEDAL
401: DLSGSDRFAF SVDDAIGAGN AVSVGSKRWL LLSKLKQGLS KQGISGRKLF PWKSGVEENE TEEVDNVGVE EGVDKRRKRR KAGTVDHELV LKAMSNGLEA
501: TEQAFLEMTD KVLETNPELA LMGSCLLVAL MRDDDVYIMN IGDSRALVAQ YQVEETGESV ETAERVEERR NDLDRDDGNK EPLVVDSSDS TVNNEAPLPQ
601: TKLVALQLTT DHSTSIEDEV TRIKNEHPDD NHCIVNDRVK GRLKVTRAFG AGFLKQPKLN DALLEMFRNE YIGTDPYISC TPSLRHYRLT ENDQFMVLSS
701: DGLYQYLSNV EVVSLAMEKF PDGDPAQHVI QELLVRAAKK AGMDFHELLD IPQGDRRKYH DDCTVLVIAL GGSRIWKSSG KYL

Arabidopsis Description

PLL1PLL1 [Source:UniProtKB/TrEMBL;Acc:A0A178VV40]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.