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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, nucleus

Predictor Summary:
  • plastid 1
  • cytosol 1
  • nucleus 3
  • mitochondrion 3
PPI

Inferred distinct locusB in Crop

Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400013942 Potato cytosol, mitochondrion 94.47 96.77
Solyc01g107300.2.1 Tomato cytosol 48.95 81.22
Solyc01g107310.2.1 Tomato mitochondrion 35.0 71.89
GSMUA_Achr6P11170_001 Banana cytosol 67.37 68.09
AT4G33920.1 Thale cress mitochondrion 66.32 66.32
CDY28332 Canola mitochondrion 66.58 65.89
CDY51944 Canola mitochondrion 66.58 65.71
Bra036972.1-P Field mustard mitochondrion 64.47 65.51
CDX72438 Canola mitochondrion 64.47 65.51
Bra034592.1-P Field mustard mitochondrion 66.32 65.45
CDY49385 Canola mitochondrion 64.21 65.24
GSMUA_Achr3P02220_001 Banana mitochondrion 64.47 65.16
Solyc02g092750.2.1 Tomato cytosol 62.11 64.48
GSMUA_Achr4P14220_001 Banana mitochondrion 62.89 64.08
GSMUA_Achr2P21550_001 Banana mitochondrion 65.0 63.99
HORVU5Hr1G018930.2 Barley mitochondrion 63.68 63.19
TraesCS5D01G085200.1 Wheat mitochondrion 62.63 62.14
TraesCS5B01G078500.1 Wheat mitochondrion 62.11 61.62
TraesCS5A01G072500.1 Wheat mitochondrion 61.58 61.1
Os12t0580900-01 Rice mitochondrion 62.89 60.97
TraesCS4D01G254500.1 Wheat mitochondrion, nucleus, plastid, vacuole 56.58 55.27
EER95306 Sorghum mitochondrion 56.84 55.1
Zm00001d048131_P001 Maize cytosol 56.05 54.48
Os03t0207400-01 Rice mitochondrion 54.47 52.81
Solyc10g055650.1.1 Tomato cytosol 47.11 52.8
TraesCS4B01G254700.1 Wheat plastid 56.58 50.47
TraesCS4A01G050000.1 Wheat plastid 56.84 50.47
Solyc09g007080.2.1 Tomato cytosol 50.0 50.26
Solyc10g084410.1.1 Tomato mitochondrion 48.95 49.47
Solyc01g111730.2.1 Tomato cytosol, mitochondrion, plastid 50.0 48.97
HORVU4Hr1G069380.3 Barley peroxisome 30.53 48.54
Solyc02g083420.2.1 Tomato mitochondrion 49.47 48.21
Solyc03g033340.2.1 Tomato mitochondrion 49.74 47.61
Solyc05g055980.2.1 Tomato cytosol 38.95 47.13
Solyc06g065920.2.1 Tomato nucleus 43.95 44.65
Solyc10g078820.1.1 Tomato mitochondrion 43.16 35.65
Solyc10g078810.1.1 Tomato cytosol 40.26 34.93
Solyc01g066870.2.1 Tomato cytosol, nucleus, peroxisome 20.0 23.97
Solyc12g099600.1.1 Tomato plasma membrane 26.05 17.22
Solyc10g086490.1.1 Tomato cytosol 25.53 16.28
Solyc09g010780.2.1 Tomato cytosol 26.32 16.05
Solyc06g076100.2.1 Tomato nucleus 29.47 15.82
Solyc08g077150.2.1 Tomato nucleus 27.89 13.32
Solyc08g007000.2.1 Tomato nucleus 27.37 13.32
Solyc10g078800.1.1 Tomato mitochondrion 41.32 11.97
Protein Annotations
KEGG:04658+3.1.3.16KEGG:04660+3.1.3.16MapMan:18.4.24.2.4Gene3D:3.60.40.10GO:GO:0003674GO:GO:0003824
GO:GO:0004721GO:GO:0004722GO:GO:0005488GO:GO:0006464GO:GO:0006470GO:GO:0008150
GO:GO:0008152GO:GO:0009987GO:GO:0016787GO:GO:0019538GO:GO:0043169GO:GO:0046872
InterPro:IPR001932InterPro:IPR036457UniProt:K4D0C0PFAM:PF00481InterPro:PP2CInterPro:PP2C_BS
InterPro:PPM-type_dom_sfInterPro:PPM-type_phosphatase_domScanProsite:PS01032PFscan:PS51746PANTHER:PTHR13832PANTHER:PTHR13832:SF362
SMART:SM00332SUPFAM:SSF81606EnsemblPlantsGene:Solyc10g049630.1EnsemblPlants:Solyc10g049630.1.1UniParc:UPI000276A092:
Description
No Description!
Coordinates
chr10:-:46300218..46302853
Molecular Weight (calculated)
42250.6 Da
IEP (calculated)
9.156
GRAVY (calculated)
-0.339
Length
380 amino acids
Sequence
(BLAST)
001: MRLCYRPLER CFGRRSGDGL LWHTDLKPHA SGDFSMAVVQ ANSSLEDQSQ VLTSPSATYV GVYDGHGGPE AARFLNRHLF PYLNKFQKEQ GCLSSEVIKR
101: AFNATEEDFI RLVKQSLPSM PKIASVGSCC LFGAISGSEL YVANAGDSRA VLGRRGFDGE KSKVVAERLS TDHNVSCEEV RKEVESLHPD DPSIVVHCRG
201: VWRVKGIIQV SRSIGDAYLK RPELNRDPIF QKYGNPVPLK RAVMTAEPSI VTRRIRTHDL FVIFASDGLW EQLSDEAAVE IVFRNPRAGI AKRLVGAALK
301: EAGKKREMRY KDIKKIEKGI RRHFHDDISV VVIYLDQQKK SFQSKGSAGC ISPPVDISSY HSDGVADEPS GLSLLKQAIY
Best Arabidopsis Sequence Match ( AT4G33920.1 )
(BLAST)
001: MLRALARPLE RCLGSRASGD GLLWQSELRP HAGGDYSIAV VQANSRLEDQ SQVFTSSSAT YVGVYDGHGG PEASRFVNRH LFPYMHKFAR EHGGLSVDVI
101: KKAFKETEEE FCGMVKRSLP MKPQMATVGS CCLVGAISND TLYVANLGDS RAVLGSVVSG VDSNKGAVAE RLSTDHNVAV EEVRKEVKAL NPDDSQIVLY
201: TRGVWRIKGI IQVSRSIGDV YLKKPEYYRD PIFQRHGNPI PLRRPAMTAE PSIIVRKLKP QDLFLIFASD GLWEHLSDET AVEIVLKHPR TGIARRLVRA
301: ALEEAAKKRE MRYGDIKKIA KGIRRHFHDD ISVIVVYLDQ NKTSSSNSKL VKQGGITAPP DIYSLHSDEA EQRRLLNVLY
Arabidopsis Description
Probable protein phosphatase 2C 63 [Source:UniProtKB/Swiss-Prot;Acc:O81760]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.