Factsheet for Solyc01g110190.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 2
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc02g082970.1.1
Solyc02g092380.2.1
Solyc03g031460.1.1
Solyc03g095610.2.1
Solyc03g111100.1.1
Solyc03g112660.2.1
Solyc03g117290.1.1
Solyc03g120440.1.1
Solyc05g053730.2.1
Solyc06g008600.2.1
Solyc06g068330.1.1
Solyc06g084040.2.1
Solyc07g005690.2.1
Solyc07g052050.1.1
Solyc07g052190.1.1
Solyc07g054690.1.1
Solyc07g063190.2.1
Solyc09g008040.2.1
Solyc09g065280.2.1
Solyc09g065990.2.1
Solyc10g006970.2.1
Solyc10g079430.1.1
Solyc11g066420.1.1
Solyc12g009970.1.1
Solyc12g013810.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G39050.1	Solyc07g052050.1.1	AT1G03140.1	21798944
AT4G39050.1	Solyc07g052190.1.1	AT1G03140.1	21798944
AT4G39050.1	Solyc09g065280.2.1	AT1G03140.1	21798944
AT4G39050.1	Solyc03g120440.1.1	AT1G15570.1	21798944
AT4G39050.1	Solyc03g031460.1.1	AT1G55890.1	21798944
AT4G39050.1	Solyc02g082970.1.1	AT2G17670.1	21798944
AT4G39050.1	Solyc06g008600.2.1	AT2G30580.1	21798944
AT4G39050.1	Solyc06g084040.2.1	AT2G30580.1	21798944
AT4G39050.1	Solyc09g065990.2.1	AT2G30580.1	21798944
AT4G39050.1	Solyc09g008040.2.1	AT2G36990.1	21798944
AT4G39050.1	Solyc07g063190.2.1	AT3G15360.1	21798944
AT4G39050.1	Solyc10g006970.2.1	AT3G15360.1	21798944
AT4G39050.1	Solyc12g013810.1.1	AT3G15360.1	21798944
AT4G39050.1	Solyc10g079430.1.1	AT3G60360.1	21798944
AT4G39050.1	Solyc03g112660.2.1	AT4G24680.1	21798944
AT4G39050.1	Solyc07g054690.1.1	AT4G28230.1	21798944
AT4G39050.1	Solyc03g095610.2.1	AT5G05190.1	21798944
AT4G39050.1	Solyc03g117290.1.1	AT5G11090.1	21798944
AT4G39050.1	Solyc06g068330.1.1	AT5G11090.1	21798944
AT4G39050.1	Solyc11g066420.1.1	AT5G22890.1	21798944
AT4G39050.1	Solyc05g053730.2.1	AT5G49210.1	21798944
AT4G39050.1	Solyc07g005690.2.1	AT5G57910.1	21798944
AT4G39050.1	Solyc12g009970.1.1	AT5G57910.1	21798944
AT4G39050.1	Solyc03g111100.1.1	AT5G63350.1	21798944
AT4G39050.1	Solyc02g092380.2.1	AT5G67530.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc11g044880.1.1	Tomato	plastid	72.68	72.82
Solyc10g054080.1.1	Tomato	plastid	72.22	72.49
KRH60786	Soybean	plastid	66.7	66.64
VIT_03s0038g00350.t01	Wine grape	plastid	68.57	66.58
KRH51475	Soybean	plastid	66.51	66.45
KRH29374	Soybean	plastid	66.42	66.05
CDX72718	Canola	plastid	61.18	64.31
AT4G39050.1	Thale cress	plastid	63.33	64.17
KRH24392	Soybean	plastid	65.2	64.0
CDY22394	Canola	plastid	62.02	63.93
CDX90305	Canola	plastid	61.65	63.79
CDY12116	Canola	plastid	61.55	63.7
Bra010714.1-P	Field mustard	plastid	62.11	63.18
GSMUA_Achr11P...	Banana	plastid	22.08	62.93
AT2G21380.2	Thale cress	plastid	61.65	62.29
CDX82022	Canola	plastid	62.11	62.0
Bra031184.1-P	Field mustard	plastid	61.83	61.66
PGSC0003DMT400008772	Potato	cytosol	26.94	60.13
KXG38192	Sorghum	plastid	58.47	59.58
Zm00001d032464_P008	Maize	plastid	58.65	58.43
Os10t0512800-01	Rice	plastid	57.81	58.36
TraesCS1A01G177600.1	Wheat	plastid	56.78	58.31
TraesCS1D01G176100.1	Wheat	plastid	56.69	58.21
TraesCS1B01G202600.1	Wheat	plastid	56.69	58.21
Zm00001d013859_P002	Maize	plastid	57.9	57.69
Bra033597.1-P	Field mustard	cytosol	63.98	56.11
Solyc03g053080.1.1	Tomato	cytosol, plastid	31.34	55.65
HORVU1Hr1G047110.10	Barley	plastid	53.88	55.12
Solyc06g060140.2.1	Tomato	plastid	49.3	46.31
Solyc04g077540.2.1	Tomato	cytosol	18.24	23.55
Solyc01g057320.1.1	Tomato	cytosol, plastid	16.09	23.5
Solyc03g119220.2.1	Tomato	nucleus	18.71	20.79
Solyc07g042560.2.1	Tomato	plastid	18.33	20.42
Solyc04g078610.2.1	Tomato	cytosol	18.8	19.5
Solyc04g081060.2.1	Tomato	nucleus	16.74	19.33
Solyc01g110380.2.1	Tomato	cytosol	16.65	19.31
Solyc04g040110.2.1	Tomato	cytosol	22.73	19.15
Solyc10g083310.1.1	Tomato	cytosol	17.77	18.81
Solyc04g076310.2.1	Tomato	cytosol, nucleus	17.59	18.8
Solyc09g010060.2.1	Tomato	cytosol	17.4	18.47
Solyc02g084390.2.1	Tomato	cytosol	17.4	18.25
Solyc06g075580.2.1	Tomato	cytosol, plastid	17.59	18.01
Solyc02g062330.1.1	Tomato	extracellular	17.03	17.83
Solyc11g072820.1.1	Tomato	cytosol, plastid	17.49	17.78
Solyc10g086340.1.1	Tomato	cytosol	17.31	17.72
Solyc09g007030.2.1	Tomato	cytosol, plastid	16.46	16.67
Solyc07g065210.2.1	Tomato	plastid	18.05	16.2
Solyc12g098630.1.1	Tomato	cytosol, plastid	19.18	15.62
Solyc11g071730.1.1	Tomato	cytosol	19.18	15.54
Solyc09g097860.2.1	Tomato	cytosol	19.08	14.92
Solyc01g108670.2.1	Tomato	cytosol	21.61	7.87

Protein Annotations

MapMan:20.1.3.6	Gene3D:3.40.850.10	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003774
GO:GO:0003777	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005856	GO:GO:0005871	GO:GO:0007018	GO:GO:0008017
GO:GO:0008150	GO:GO:0009987	GO:GO:0016787	GO:GO:0016887	InterPro:IPR001752	InterPro:IPR036961
UniProt:K4B3N2	InterPro:Kinesin-like_fam	InterPro:Kinesin_motor_CS	InterPro:Kinesin_motor_dom	InterPro:Kinesin_motor_dom_sf	InterPro:P-loop_NTPase
PFAM:PF00225	PRINTS:PR00380	ScanProsite:PS00411	PFscan:PS50067	PANTHER:PTHR24115	PANTHER:PTHR24115:SF497
SMART:SM00129	SUPFAM:SSF52540	EnsemblPlantsGene:Solyc01g110190.2	EnsemblPlants:Solyc01g110190.2.1	UniParc:UPI0002768DA8	SEG:seg

Description

No Description!

Coordinates

chr1:-:96948760..96960789

Molecular Weight (calculated)

119838.0 Da

IEP (calculated)

5.841

GRAVY (calculated)

-0.620

Length

1069 amino acids

Sequence
(BLAST)

0001: MFIPAHFHFN QFFQIKTSST TPRRGPPPIS TSHQCELHLK KKQLHAEKFL CYRFLVELMS RSMSGSSSRG RSTSPFHHRK PSSPYSSTSS SSSFMNGRLM
0101: PRSNSSTATS MLGSGTGVSS KSVTPGRNRS NSEYSRGYGN RTPVSYQSTE ELIAEPVDMS RAGESISVTV RFRPLSEREY NKGDEIAWYP DGDKIVRNEY
0201: NAGTAFAFDR VFGPDTCTQE VYEVAARPVV KAAMEGINGT VFAYGVTSSG KTHTMHGDQN SPGIIPLAIK DVFSIIQDTP GREFLLRVSY LEIYNEVIND
0301: LLDPTGQNLR VREDTQGTYV EGMKEEVVLS PGHALSFIAA GEEHRHVGSN NFNLFSSRSH TIFTLMIESS AHGDEYDGVI FSQLNLIDLA GSESSKTETT
0401: GLRRKEGSYI NKSLLTLGTV IGKLSEGKAF HVPYRDSKLT RLLQSSLSGH GHVSLICTIT PASSNMEETH NTLKFASRAK RVEIYASRNK IIDEKSLIKK
0501: YQKEICCLKE ELDQLRRGML VGVNHEELMT LKQQLEEGQV KMQSRLEEEE DAKAALLSRI QKLTKLILVS SKNSIPGNRF ASEDDKLNGS EPIDSENQRD
0601: SSSETSDFKH GRSSSKWNDD VSQAGSVITE STQGGDLVTG SKLPIEGVSL SDQMDLLVEQ VKMLAGEIAF STSTLKRMTE QSVNDPENSK SHIEIQSLER
0701: DIEGKREQMR ILEQRIVESG EVSISSASLV EMQQTLMKLM TQCSEKGFEL EIKSADNRIL QEELQNKCLE NKELQETIYN LEQQLAAAKV EKSYPSTEQG
0801: LLSDKYIDDL EKKIQLQDIE NDKLKLELVQ SVEESSALRV QNQKLFEETS YAKELASAAA VELKNLAGEV TSLSIQNKEL EKELLAARQA LNSRSTIAHT
0901: GNVRHRKHGE NLWQGRRSRV SDRESEVPGV VRDGLGTWDL DTKDLKMELQ ARKQREAVLE AALVEKEILE DEYRKKVEEG KRREAALEND LANMWVLVSQ
1001: LRKKNGATQD VKTVTERQNF GRRNMNDPEM FDSEYNDPII DDEQTEDHAT SVAEILKEDP LVARLKVPW

Best Arabidopsis Sequence Match ( AT4G39050.1 )
(BLAST)

0001: MASSSSRTRS SRPPSPASST SSSHLSNRLI PRSNSTSASS LITSAAGIAS RSMTPSRTFS DSGLIGSGSF GIGSPVPYPS EELLGDPMDD TISSERDSIS
0101: VTVRFRPLSD REYQRGDEVA WYPDGDTLVR HEYNPLTAYA FDKVFGPQAT TIDVYDVAAR PVVKAAMEGV NGTVFAYGVT SSGKTHTMHG DQESPGIIPL
0201: AIKDVFSIIQ DTPGREFLLR VSYLEIYNEV INDLLDPTGQ NLRVREDSQG TYVEGIKEEV VLSPGHALSF IAAGEEHRHV GSNNFNLLSS RSHTIFTLMV
0301: ESSATGDEYD GVIFSQLNLI DLAGSESSKT ETTGLRRKEG SYINKSLLTL GTVIGKLSEG KATHIPYRDS KLTRLLQSSL SGHGHVSLIC TITPASSSSE
0401: ETHNTLKFAS RAKSIEIYAS RNQIIDEKSL IKKYQREIST LKLELDQLRR GMLVGVSHEE LMSLKQQLEE GQVKMQSRLE EEEEAKAALM SRIQKLTKLI
0501: LVSTKNSIPG YSGDIPTHQR SLSAGKDDKF DSLLLESDNL GSPSSTLALL SEGSLGFNHR RSSSKLNDEN SPGAEFTQGV MTPDEIDLLV EQVKMLAGEI
0601: AFSTSTLKRL VDQSVNDPEN SQTQIQNLER EIHEKQRQMR GLEQLIIESG EASIANASLV EMQQKVMSLM TQCNEKSFEL EIKSADNCIL QEQLQEKCTE
0701: NKELHEKVNL LEQRLNAVSS EKSSPSCSNK AVSGEYADEL KKKIQSQEIE NEELKLEHVQ IVEENSGLRV QNQKLAEEAS YAKELASAAA VELKNLASEV
0801: TKLSLQNTKL EKELAAARDL AQTRNPMNGV NRKYNDGARS GRKGRISSSR SSGDEFDAWN LDPEDLKMEL QVRKQREVAL ESALAEKEFI EDEYRKKAEE
0901: AKRREEALEN DLANMWVLVA KLKKDNGALP EPNGTDPGRE LEKSQSHAVL KERQVSSAPR QPEVVVVAKT EETPKEEPLV ARLKARMQEM KEKEMKSQAN
1001: GDANSHICKV CFESPTAAIL LPCRHFCLCK SCSLACSECP ICRTKISDRL FAFPS

Arabidopsis Description

KIN7DKinesin-like protein KIN-7D, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8W5R5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.