Factsheet for Solyc03g119220.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

nucleus: 28394025

msms PMID: 28394025 doi

AJM Howden, R Stam, V Martinez Heredia, GB Motion, S Ten Have, K Hodge, TM Marques Monteiro Amaro, E Huitema

Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400014403	Potato	nucleus	51.04	99.39
VIT_17s0000g03290.t01	Wine grape	cytosol, plastid	82.43	82.43
KRH48554	Soybean	cytosol	78.27	78.27
KRH39148	Soybean	cytosol, plastid	77.96	77.96
AT1G18370.1	Thale cress	plastid	75.88	74.95
CDX81870	Canola	plastid	74.01	74.71
Bra031027.1-P	Field mustard	plastid	73.6	74.6
CDY21709	Canola	plastid	73.39	74.39
Bra025912.1-P	Field mustard	cytosol, plastid	75.68	74.29
CDY26167	Canola	cytosol, plastid	75.57	74.18
CDY19208	Canola	cytosol	75.05	74.13
Os01t0513900-01	Rice	cytosol, plastid	65.9	66.46
EER89062	Sorghum	cytosol	64.76	65.58
Zm00001d045554_P002	Maize	cytosol, plastid	64.55	65.23
TraesCS6A01G103200.3	Wheat	plastid	63.83	64.63
HORVU6Hr1G018600.4	Barley	plastid	63.72	64.59
TraesCS6D01G091600.1	Wheat	plastid	63.72	64.39
GSMUA_Achr1P23180_001	Banana	cytosol, plastid	62.27	64.34
TraesCS6B01G132300.1	Wheat	plastid	63.41	64.28
GSMUA_Achr9P18690_001	Banana	cytosol	61.33	63.99
TraesCS5A01G396100.1	Wheat	plastid	62.37	62.89
TraesCS5D01G405400.1	Wheat	plastid	62.27	62.79
TraesCS5B01G400900.1	Wheat	plastid	62.06	62.58
HORVU6Hr1G018950.4	Barley	cytosol, nucleus, plastid	62.27	62.33
HORVU5Hr1G096570.1	Barley	cytosol, nucleus, plastid	62.27	62.33
Solyc07g042560.2.1	Tomato	plastid	59.04	59.17
Solyc01g110380.2.1	Tomato	cytosol	38.98	40.67
Solyc04g081060.2.1	Tomato	nucleus	36.69	38.12
Solyc02g084390.2.1	Tomato	cytosol	37.94	35.82
Solyc02g062330.1.1	Tomato	extracellular	37.21	35.06
Solyc03g053080.1.1	Tomato	cytosol, plastid	16.94	27.08
Solyc04g077540.2.1	Tomato	cytosol	18.82	21.86
Solyc01g057320.1.1	Tomato	cytosol, plastid	16.22	21.31
Solyc01g110190.2.1	Tomato	plastid	20.79	18.71
Solyc11g044880.1.1	Tomato	plastid	20.48	18.46
Solyc10g054080.1.1	Tomato	plastid	19.85	17.93
Solyc06g060140.2.1	Tomato	plastid	21.1	17.84
Solyc04g078610.2.1	Tomato	cytosol	18.82	17.56
Solyc04g076310.2.1	Tomato	cytosol, nucleus	18.19	17.5
Solyc06g075580.2.1	Tomato	cytosol, plastid	18.5	17.05
Solyc10g083310.1.1	Tomato	cytosol	17.67	16.83
Solyc11g072820.1.1	Tomato	cytosol, plastid	18.4	16.83
Solyc09g010060.2.1	Tomato	cytosol	17.26	16.48
Solyc10g086340.1.1	Tomato	cytosol	17.67	16.28
Solyc04g040110.2.1	Tomato	cytosol	21.41	16.23
Solyc09g007030.2.1	Tomato	cytosol, plastid	17.36	15.81
Solyc11g071730.1.1	Tomato	cytosol	18.61	13.57
Solyc12g098630.1.1	Tomato	cytosol, plastid	18.4	13.49
Solyc07g065210.2.1	Tomato	plastid	16.01	12.93
Solyc09g097860.2.1	Tomato	cytosol	18.19	12.8
Solyc01g108670.2.1	Tomato	cytosol	21.83	7.16

Protein Annotations

MapMan:13.4.4.1.1	MapMan:20.1.3.6	Gene3D:3.40.850.10	ncoils:Coil	GO:GO:0000166	GO:GO:0003674
GO:GO:0003774	GO:GO:0003777	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005856	GO:GO:0005871	GO:GO:0005874
GO:GO:0007018	GO:GO:0008017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016787	GO:GO:0016887
InterPro:IPR001752	InterPro:IPR036961	UniProt:K4BM71	InterPro:Kinesin-like_fam	InterPro:Kinesin_motor_CS	InterPro:Kinesin_motor_dom
InterPro:Kinesin_motor_dom_sf	InterPro:NACK_C	InterPro:P-loop_NTPase	PFAM:PF00225	PFAM:PF11995	PRINTS:PR00380
ScanProsite:PS00411	PFscan:PS50067	PANTHER:PTHR24115	PANTHER:PTHR24115:SF522	SMART:SM00129	SUPFAM:SSF52540
EnsemblPlantsGene:Solyc03g119220.2	EnsemblPlants:Solyc03g119220.2.1	UniParc:UPI00027663DC	SEG:seg	:	:

Description

Kinesin-like protein KIN-7A [Source:Projected from Arabidopsis thaliana (AT1G18370) UniProtKB/Swiss-Prot;Acc:Q8S905]

Coordinates

chr3:-:67872656..67878451

Molecular Weight (calculated)

109114.0 Da

IEP (calculated)

7.137

GRAVY (calculated)

-0.596

Length

962 amino acids

Sequence
(BLAST)

001: MTVRTPGTPA SKIERTPATT PSGHRAKEEK IVVTVRLRPL NKRELSAKDH AAWECIDDHT IIYRSLPQER AAQPASFTFD KVFGPDSITE AVYEEGVKNV
101: ALSSLMGINA TIFAYGQTSS GKTYTMRGIT EKAVNDIYSH IMSTPEREFR IRISGLEIYN ENVRDLLNSE SGRNLKLLDD PEKGTVVEKL VEETASNDQH
201: LRHLISICEA QRQVGETALN DTSSRSHQII RLTIESTLRE SSDCVRSYVA SLNFVDLAGS ERASQTNADG ARLREGCHIN LSLMTLTTVI RKLSVGKRSG
301: HVPYRDSKLT RILQHSLGGN ARTAIICTLS PASSHVEQSR NTLFFATRAK EVTNKAQVNM VVSDKQLVKH LQKEVARLEA ELRTPEPANE KDWKIQQMEM
401: EIEDLKRQRD LAQSQVDELR RKLQEEQGLK PSESVSPIVK KCLSFSGTLS PNLEEKAPFV GERTRNTMGR QSMRQSLAAP FTLMHEIRKL EHLQEQLGDE
501: ANRALEVLQK EVACHRLGNQ DAAETIAKLQ AEIREMRSVP PVLRKEVEVG NVVAVNKSVS ANLKDEIARL HSQGSTIADL EEQLENVQKS LDKLVMSLPS
601: NNDQQSNNDT TQKAKHPSKK KKLLPLASSN SINRQNFLKS PCSPLSTARQ VLDCEIENRA PDLDDLSCEI QPMHENETPT KSDGGDISSK EGTPYRRSSS
701: VNMRKMQKMF QEAAEENVRN IRSYVTELKE RVAKLQYQKQ LLVCQVLELE ANEAAGYNLE DDENIHQIPE ESPVSWQITF KEQRQQIIDL WDVCYVSIIH
801: RSQFYLLFKG DPADEIYLEV ELRRLTWLQQ HLAELGNATP ARVGNEPTVS LSSSIRAIKR EREFLAKRLT TRLTAEERDY LYIKWEVPLE GKQRRMQFIN
901: KLWTNPHDEK HVKESAEIVA KLVGFCEGGN MSREMFELNF VLPSDRRPWF AGWNQISDLL HI

Best Arabidopsis Sequence Match ( AT1G18370.1 )
(BLAST)

001: MTIKTPGTPV SKMDRTPAVT PGGSSRSREE KIVVTVRLRP MNKRELLAKD QVAWECVNDH TIVSKPQVQE RLHHQSSFTF DKVFGPESLT ENVYEDGVKN
101: VALSALMGIN ATIFAYGQTS SGKTYTMRGV TEKAVNDIYN HIIKTPERDF TIKISGLEIY NENVRDLLNS DSGRALKLLD DPEKGTVVEK LVEETANNDN
201: HLRHLISICE AQRQVGETAL NDTSSRSHQI IRLTIQSTHR ENSDCVRSYM ASLNFVDLAG SERASQSQAD GTRLREGCHI NLSLMTLTTV IRKLSVGKRS
301: GHIPYRDSKL TRILQHSLGG NARTAIICTL SPALAHVEQS RNTLYFANRA KEVTNNAHVN MVVSDKQLVK HLQKEVARLE AERRTPGPST EKDFKIQQME
401: MEIGELRRQR DDAQIQLEEL RQKLQGDQQQ NKGLNPFESP DPPVRKCLSY SVAVTPSSEN KTLNRNERAR KTTMRQSMIR QSSTAPFTLM HEIRKLEHLQ
501: EQLGEEATKA LEVLQKEVAC HRLGNQDAAQ TIAKLQAEIR EMRTVKPSAM LKEVGDVIAP NKSVSANLKE EITRLHSQGS TIANLEEQLE SVQKSIDKLV
601: MSLPSNISAG DETPKTKNHH HQSKKKKLLP LTPSSASNRQ NFLKSPCSPL SASRQVLDCD AENKAPQENN SSAARGATTP QGSEKETPQK GEESGDVSSR
701: EGTPGYRRSS SVNMKKMQQM FQNAAEENVR SIRAYVTELK ERVAKLQYQK QLLVCQVLEL EANDGAGYSV ENEENTIMED EEQNQVAWHI TFIEERQQII
801: ELWHVCHVSI IHRTQFYLLF KGDQADQIYM EVELRRLTWL EQHLAEVGNA TPARNCDESV VSLSSSIKAL RREREFLAKR VNSRLTPEER EELYMKWDVP
901: LEGKQRKLQF VNKLWTDPYD SRHVQESAEI VAKLVGFCES GNISKEMFEL NFAVPSDKRQ WNIGWDNISN LLHL

Arabidopsis Description

KIN7AKinesin-like protein KIN-7A [Source:UniProtKB/Swiss-Prot;Acc:Q8S905]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.