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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 5
  • mitochondrion 2
  • cytosol 2
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:cytosol
Predotar:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:mitochondrion
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX70170
CDX71815
CDX74505
CDX75826
CDX79708
CDX80954
CDX81722
CDX82437
CDX85730
CDX86248
CDX88648
CDX89193
CDX92648
CDX96836
CDX97807
CDX98183
CDX98822
CDY02778
CDY03428
CDY08267
CDY08725
CDY09178
CDY09179
CDY10748
CDY11025
CDY11841
CDY15450
CDY18468
CDY18994
CDY23989
CDY26081
CDY26819
CDY26965
CDY26966
CDY29659
CDY30354
CDY30747
CDY31715
CDY32499
CDY32739
CDY33924
CDY34301
CDY36499
CDY36574
CDY37439
CDY41170
CDY45734
CDY47131
CDY51107
CDY51271
CDY52144
CDY53304
CDY56435
CDY56997
CDY57462
CDY58906
CDY66142
CDY66415
CDY69109
CDY70877

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G39050.1 CDY15450 AT1G03140.1 21798944
AT4G39050.1 CDY32499 AT1G03140.1 21798944
AT4G39050.1 CDY37439 AT1G03140.1 21798944
AT4G39050.1 CDX81722 AT1G15570.1 21798944
AT4G39050.1 CDX96836 AT1G15570.1 21798944
AT4G39050.1 CDY36574 AT1G15570.1 21798944
AT4G39050.1 CDY53304 AT1G15570.1 21798944
AT4G39050.1 CDY66415 AT1G15570.1 21798944
AT4G39050.1 CDY08267 AT1G55890.1 21798944
AT4G39050.1 CDY26081 AT1G55890.1 21798944
AT4G39050.1 CDY26819 AT2G17670.1 21798944
AT4G39050.1 CDY30354 AT2G17670.1 21798944
AT4G39050.1 CDX97807 AT2G30580.1 21798944
AT4G39050.1 CDY10748 AT2G30580.1 21798944
AT4G39050.1 CDY23989 AT2G30580.1 21798944
AT4G39050.1 CDY29659 AT2G30580.1 21798944
AT4G39050.1 CDY47131 AT2G30580.1 21798944
AT4G39050.1 CDX79708 AT2G36990.1 21798944
AT4G39050.1 CDY18468 AT2G36990.1 21798944
AT4G39050.1 CDY66142 AT2G36990.1 21798944
AT4G39050.1 CDX75826 AT3G15360.1 21798944
AT4G39050.1 CDX82437 AT3G15360.1 21798944
AT4G39050.1 CDX71815 AT3G60360.1 21798944
AT4G39050.1 CDY41170 AT3G60360.1 21798944
AT4G39050.1 CDY56997 AT3G60360.1 21798944
AT4G39050.1 CDY58906 AT3G60360.1 21798944
AT4G39050.1 CDX92648 AT4G24680.1 21798944
AT4G39050.1 CDY03428 AT4G24680.1 21798944
AT4G39050.1 CDY11025 AT4G24680.1 21798944
AT4G39050.1 CDY34301 AT4G24680.1 21798944
AT4G39050.1 CDX89193 AT4G28230.1 21798944
AT4G39050.1 CDY18994 AT4G28230.1 21798944
AT4G39050.1 CDX70170 AT5G05190.1 21798944
AT4G39050.1 CDX80954 AT5G05190.1 21798944
AT4G39050.1 CDX98822 AT5G05190.1 21798944
AT4G39050.1 CDY52144 AT5G05190.1 21798944
AT4G39050.1 CDX85730 AT5G11090.1 21798944
AT4G39050.1 CDY51107 AT5G11090.1 21798944
AT4G39050.1 CDX74505 AT5G22890.1 21798944
AT4G39050.1 CDX98183 AT5G22890.1 21798944
AT4G39050.1 CDY09178 AT5G22890.1 21798944
AT4G39050.1 CDY09179 AT5G22890.1 21798944
AT4G39050.1 CDY26965 AT5G22890.1 21798944
AT4G39050.1 CDY26966 AT5G22890.1 21798944
AT4G39050.1 CDY31715 AT5G22890.1 21798944
AT4G39050.1 CDY69109 AT5G22890.1 21798944
AT4G39050.1 CDX86248 AT5G49210.1 21798944
AT4G39050.1 CDY33924 AT5G49210.1 21798944
AT4G39050.1 CDY56435 AT5G49210.1 21798944
AT4G39050.1 CDY70877 AT5G49210.1 21798944
AT4G39050.1 CDX88648 AT5G57910.1 21798944
AT4G39050.1 CDY02778 AT5G57910.1 21798944
AT4G39050.1 CDY11841 AT5G57910.1 21798944
AT4G39050.1 CDY32739 AT5G57910.1 21798944
AT4G39050.1 CDY51271 AT5G57910.1 21798944
AT4G39050.1 CDY57462 AT5G57910.1 21798944
AT4G39050.1 CDY30747 AT5G63350.1 21798944
AT4G39050.1 CDY45734 AT5G63350.1 21798944
AT4G39050.1 CDY08725 AT5G67530.1 21798944
AT4G39050.1 CDY36499 AT5G67530.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX72718 Canola plastid 96.62 98.53
CDX90305 Canola plastid 91.32 91.67
CDY12116 Canola plastid 90.94 91.29
AT4G39050.1 Thale cress plastid 91.61 90.05
Bra033597.1-P Field mustard cytosol 99.33 84.5
CDX82022 Canola plastid 80.52 77.96
KRH51475 Soybean plastid 73.19 70.93
KRH60786 Soybean plastid 72.81 70.56
VIT_03s0038g00350.t01 Wine grape plastid 74.35 70.03
Solyc10g054080.1.1 Tomato plastid 71.75 69.86
Solyc11g044880.1.1 Tomato plastid 71.84 69.82
KRH29374 Soybean plastid 72.23 69.67
KRH24392 Soybean plastid 70.88 67.49
KXG38192 Sorghum plastid 65.38 64.63
Os10t0512800-01 Rice plastid 65.09 63.74
TraesCS1B01G202600.1 Wheat plastid 63.74 63.5
TraesCS1A01G177600.1 Wheat plastid 63.74 63.5
PGSC0003DMT400008772 Potato cytosol 29.32 63.47
TraesCS1D01G176100.1 Wheat plastid 63.65 63.4
Solyc01g110190.2.1 Tomato plastid 63.93 62.02
Zm00001d032464_P008 Maize plastid 63.93 61.79
Zm00001d013859_P002 Maize plastid 63.26 61.14
HORVU1Hr1G047110.10 Barley plastid 60.56 60.1
GSMUA_Achr11P... Banana plastid 21.5 59.47
CDY08179 Canola plastid 42.53 49.11
CDY04671 Canola plastid 42.43 49.0
CDY08463 Canola cytosol, plastid 43.97 46.91
CDY01095 Canola cytosol, plastid 43.88 46.81
CDY04998 Canola plastid 42.82 45.54
CDY14073 Canola plastid 42.82 45.45
CDY47900 Canola cytosol 29.32 43.99
CDX75327 Canola nucleus 9.74 37.41
CDY03483 Canola cytosol 5.98 35.03
CDX85120 Canola cytosol, plastid 11.57 29.06
CDX68941 Canola cytosol 12.83 27.82
CDX77491 Canola cytosol, plastid 9.35 26.58
CDY67829 Canola cytosol 18.51 23.24
CDY67820 Canola cytosol 18.51 23.24
CDY22404 Canola nucleus 15.81 21.35
CDY44836 Canola cytosol 18.32 20.9
CDY30956 Canola cytosol, plastid 18.23 20.75
CDY42594 Canola nucleus 16.39 20.68
CDY41952 Canola nucleus 16.1 20.54
CDX99601 Canola nucleus 16.1 20.42
CDY15900 Canola nucleus 16.49 20.26
CDY45884 Canola cytosol, plastid 12.83 20.24
CDY27279 Canola cytosol 15.81 20.1
CDY13822 Canola nucleus 16.68 20.07
CDX82016 Canola nucleus 16.68 20.07
CDY34261 Canola cytosol 16.01 19.6
CDX74009 Canola cytosol 23.14 19.14
CDY19208 Canola cytosol 17.94 19.1
CDY26167 Canola cytosol, plastid 18.03 19.08
CDY07951 Canola cytosol 23.53 18.99
CDX73746 Canola cytosol 17.65 18.91
CDY21709 Canola plastid 17.26 18.86
CDY45912 Canola cytosol 18.71 18.85
CDY29004 Canola cytosol 18.23 18.69
CDY35769 Canola cytosol 18.61 18.67
CDX85308 Canola cytosol 18.51 18.66
CDY63235 Canola cytosol 18.61 18.58
CDX86343 Canola cytosol 18.42 18.56
CDY19973 Canola cytosol 18.51 18.55
CDX75064 Canola cytosol 18.03 18.53
CDX81870 Canola plastid 16.97 18.47
CDX77978 Canola cytosol 17.55 18.44
CDX84151 Canola cytosol 17.84 18.21
CDX90660 Canola cytosol 17.94 18.16
CDY30779 Canola cytosol 17.26 18.1
CDX77192 Canola cytosol, plastid 18.03 17.88
CDY31717 Canola cytosol, plastid 18.03 17.86
CDY03482 Canola cytosol 16.39 17.8
CDY30599 Canola cytosol 17.36 17.54
CDY17754 Canola cytosol 17.36 17.49
CDY23691 Canola cytosol, plastid 17.84 17.42
CDY45220 Canola cytosol 16.97 17.34
CDX82979 Canola cytosol, plastid 17.74 17.33
CDX93381 Canola cytosol, plastid 16.97 15.99
CDY55295 Canola cytosol 19.29 15.76
CDY18447 Canola cytosol, plastid 16.97 15.67
CDX87944 Canola cytosol 19.09 15.66
CDY43743 Canola nucleus 14.18 15.52
CDY36055 Canola plastid 15.72 15.36
CDY18100 Canola cytosol, plastid 18.61 14.77
CDY47004 Canola cytosol 17.84 14.66
CDY56229 Canola cytosol, plastid 18.51 14.6
CDY58692 Canola nucleus 18.03 14.6
CDY42843 Canola cytosol 17.84 14.58
CDY02183 Canola nucleus 18.13 14.56
CDX72728 Canola cytosol 10.22 14.38
CDX82261 Canola plastid 16.68 14.17
CDX92129 Canola cytosol 19.29 10.47
CDX75326 Canola cytosol 3.66 10.44
CDX95855 Canola cytosol 20.35 10.42
CDY70999 Canola cytosol, mitochondrion 6.75 9.43
CDY71066 Canola cytosol, mitochondrion 6.65 9.32
CDY12957 Canola cytosol 7.23 9.08
CDX92299 Canola cytosol 22.18 8.43
CDX99277 Canola cytosol 21.99 8.43
CDY02395 Canola nucleus 2.51 3.87
Protein Annotations
MapMan:20.1.3.6Gene3D:3.30.40.10Gene3D:3.40.850.10GO:A0A078GAI8UniProt:A0A078GAI8EnsemblPlants:CDY22394
ProteinID:CDY22394ProteinID:CDY22394.1ncoils:CoilGO:GO:0000166GO:GO:0003674GO:GO:0003774
GO:GO:0003777GO:GO:0003824GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0007018
GO:GO:0008017GO:GO:0008150GO:GO:0009987GO:GO:0016787EnsemblPlantsGene:GSBRNA2T00018884001InterPro:IPR001752
InterPro:IPR001841InterPro:IPR013083InterPro:IPR036961InterPro:Kinesin-like_famInterPro:Kinesin_motor_CSInterPro:Kinesin_motor_dom
InterPro:Kinesin_motor_dom_sfInterPro:P-loop_NTPasePFAM:PF00225PFAM:PF13920PRINTS:PR00380ScanProsite:PS00411
PFscan:PS50067PFscan:PS50089PANTHER:PTHR24115PANTHER:PTHR24115:SF497SMART:SM00129SUPFAM:SSF52540
SUPFAM:SSF57850UniParc:UPI0004EE9AB5InterPro:Znf_RINGInterPro:Znf_RING/FYVE/PHDSEG:seg:
Description
BnaA06g37160DBnaA06g37160D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GAI8]
Coordinates
chrLK032130:-:539320..546354
Molecular Weight (calculated)
114571.0 Da
IEP (calculated)
5.590
GRAVY (calculated)
-0.536
Length
1037 amino acids
Sequence
(BLAST)
0001: MASSSSRTRS SSPFSNNRPA SPSSSTSSSH LSNRLVPRSS SLPNSGGGIG SRSMTTSRTF SDYGPIGSES FGTGSSLPYP SEELLGEPVE ETISSERDSI
0101: SVTVRFRPLS DREYQRGDEV AWYPDGDTMV RHEYNPLTAY AFDKVFGPQA NTMDVYDVAA RPVVKAAMEG VNGTVFAYGV TSSGKTHTMH GDQESPGIIP
0201: LAIKDVFSII QDTPGREFLL RVSYLEIYNE VINDLLDPTG QNLRVREDSQ GTYVEGIKEE VVLSPGHVLS FIAAGEEHRH VGSNNFNLMS SRSHTLFTLM
0301: IESSATGDDY DGVIFSQLNL IDLAGSESSK TETTGLRRKE GSYINKSLLT LGTVIGKLSE GKATHIPYRD SKLTRLLQSS LSGHGHVSLI CTITPASSSN
0401: EETHNTLKFA SRAKSIEIYA SRNQIIDEKS LIKKYQREIS ILKLELDQLR RGMLVGVSHE ELMSLKQQLE EGQVKMQSRL EEEEEAKAAL MSRIQKLTKL
0501: ILVSTKNSRT GYLGDVPTHQ RSLSAGNDDK FASLLFDNDN LGSPSSTLAP VSDGSLGFNH RRSSSKLNGE NSPGAEITQG VMTPDEIDLL VEQVKMLAGE
0601: VAFSMSTLKR LVDQSVNDPE NSQTQIQDLE REIQEKQGQM RALEQLIIES GEASIANASL VEMQQKVMSL MTQCNEKSFE LEIKSADNCI LQEQLQKKCT
0701: ENKELHEKVN LLEQRLKAVS SEKSASSGEY ADELKRKIQS QEIKNEKLKL EHVQIVEENS GLRVQNQKLA EEASYAKELA SAAAVELKNL ASEVTKLSLQ
0801: NTKLEKELAA ARDLAQTRNP MNGGRISSGR SSGDEFHSRS LDLEDLKMEL KARKQREAVL ESALSEKEFI EEEYRKKAEE AKRREEALEN DLANMWVLVA
0901: KLKKDNGASS EVSGTATDPA REIEKNQSNT VLKERQVSSA PRQPEVVVVA KTEETPKEEP LVARLKARMQ EMKEKEMKSQ VNGDANSHIC KVCFESPTAA
1001: ILLPCRHFCL CKSCSLACSE CPICRTKISD RLFAFPS
Best Arabidopsis Sequence Match ( AT4G39050.1 )
(BLAST)
0001: MASSSSRTRS SRPPSPASST SSSHLSNRLI PRSNSTSASS LITSAAGIAS RSMTPSRTFS DSGLIGSGSF GIGSPVPYPS EELLGDPMDD TISSERDSIS
0101: VTVRFRPLSD REYQRGDEVA WYPDGDTLVR HEYNPLTAYA FDKVFGPQAT TIDVYDVAAR PVVKAAMEGV NGTVFAYGVT SSGKTHTMHG DQESPGIIPL
0201: AIKDVFSIIQ DTPGREFLLR VSYLEIYNEV INDLLDPTGQ NLRVREDSQG TYVEGIKEEV VLSPGHALSF IAAGEEHRHV GSNNFNLLSS RSHTIFTLMV
0301: ESSATGDEYD GVIFSQLNLI DLAGSESSKT ETTGLRRKEG SYINKSLLTL GTVIGKLSEG KATHIPYRDS KLTRLLQSSL SGHGHVSLIC TITPASSSSE
0401: ETHNTLKFAS RAKSIEIYAS RNQIIDEKSL IKKYQREIST LKLELDQLRR GMLVGVSHEE LMSLKQQLEE GQVKMQSRLE EEEEAKAALM SRIQKLTKLI
0501: LVSTKNSIPG YSGDIPTHQR SLSAGKDDKF DSLLLESDNL GSPSSTLALL SEGSLGFNHR RSSSKLNDEN SPGAEFTQGV MTPDEIDLLV EQVKMLAGEI
0601: AFSTSTLKRL VDQSVNDPEN SQTQIQNLER EIHEKQRQMR GLEQLIIESG EASIANASLV EMQQKVMSLM TQCNEKSFEL EIKSADNCIL QEQLQEKCTE
0701: NKELHEKVNL LEQRLNAVSS EKSSPSCSNK AVSGEYADEL KKKIQSQEIE NEELKLEHVQ IVEENSGLRV QNQKLAEEAS YAKELASAAA VELKNLASEV
0801: TKLSLQNTKL EKELAAARDL AQTRNPMNGV NRKYNDGARS GRKGRISSSR SSGDEFDAWN LDPEDLKMEL QVRKQREVAL ESALAEKEFI EDEYRKKAEE
0901: AKRREEALEN DLANMWVLVA KLKKDNGALP EPNGTDPGRE LEKSQSHAVL KERQVSSAPR QPEVVVVAKT EETPKEEPLV ARLKARMQEM KEKEMKSQAN
1001: GDANSHICKV CFESPTAAIL LPCRHFCLCK SCSLACSECP ICRTKISDRL FAFPS
Arabidopsis Description
KIN7DKinesin-like protein KIN-7D, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8W5R5]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.