CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 2
plastid 3
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY08463	Canola	cytosol, plastid	96.91	96.91
AT3G12020.3	Thale cress	cytosol, plastid	88.99	82.85
CDY04998	Canola	plastid	75.62	75.38
CDY14073	Canola	plastid	75.31	74.92
Solyc03g053080.1.1	Tomato	cytosol, plastid	45.88	74.09
CDY47900	Canola	cytosol	52.57	73.95
Os06t0206700-01	Rice	cytosol	24.49	73.91
Os02t0775400-01	Rice	mitochondrion	37.04	65.81
KXG31200	Sorghum	mitochondrion, plastid	63.27	61.69
Zm00001d018246_P015	Maize	mitochondrion, plastid	63.37	61.23
TraesCS6A01G334900.3	Wheat	cytosol, plastid	62.35	60.54
TraesCS6B01G365300.2	Wheat	cytosol, mitochondrion, plastid	62.24	60.5
GSMUA_Achr3P07790_001	Banana	cytosol, plastid	64.81	60.4
TraesCS6D01G314500.1	Wheat	cytosol, mitochondrion, plastid	62.14	60.4
Zm00001d044982_P009	Maize	cytosol	59.47	60.21
HORVU6Hr1G080920.22	Barley	cytosol	62.14	59.92
TraesCS7B01G071700.1	Wheat	plastid	58.13	57.36
TraesCS7A01G167100.1	Wheat	mitochondrion	58.23	57.29
TraesCS7D01G167700.1	Wheat	cytosol, plastid	57.3	57.13
HORVU7Hr1G034990.1	Barley	plastid	57.2	56.39
CDY04671	Canola	plastid	45.78	49.55
CDY08179	Canola	plastid	45.68	49.44
CDX72718	Canola	plastid	46.3	44.25
CDY22394	Canola	plastid	46.81	43.88
CDX90305	Canola	plastid	46.5	43.76
CDY12116	Canola	plastid	46.19	43.47
CDX82022	Canola	plastid	46.5	42.2
CDX75327	Canola	nucleus	10.29	37.04
CDY03483	Canola	cytosol	6.17	33.9
CDX68941	Canola	cytosol	14.09	28.66
CDX85120	Canola	cytosol, plastid	11.52	27.12
CDX77491	Canola	cytosol, plastid	9.47	25.21
CDY67829	Canola	cytosol	19.14	22.52
CDY67820	Canola	cytosol	19.14	22.52
CDY22404	Canola	nucleus	17.39	22.01
CDY41952	Canola	nucleus	18.0	21.53
CDY42594	Canola	nucleus	18.0	21.29
CDX99601	Canola	nucleus	17.7	21.03
CDX82016	Canola	nucleus	18.42	20.77
CDY13822	Canola	nucleus	18.42	20.77
CDY44836	Canola	cytosol	19.34	20.68
CDY30956	Canola	cytosol, plastid	19.24	20.53
CDY15900	Canola	nucleus	17.8	20.5
CDY19208	Canola	cytosol	19.75	19.71
CDY26167	Canola	cytosol, plastid	19.86	19.69
CDY45884	Canola	cytosol, plastid	13.27	19.63
CDY21709	Canola	plastid	19.14	19.6
CDY63235	Canola	cytosol	20.68	19.35
CDY35769	Canola	cytosol	20.58	19.34
CDY45912	Canola	cytosol	20.47	19.34
CDY19973	Canola	cytosol	20.58	19.32
CDY34261	Canola	cytosol	16.77	19.24
CDX85308	Canola	cytosol	20.37	19.24
CDX86343	Canola	cytosol	20.37	19.24
CDY27279	Canola	cytosol	16.15	19.24
CDX73746	Canola	cytosol	19.14	19.21
CDX81870	Canola	plastid	18.83	19.2
CDX77978	Canola	cytosol	19.03	18.74
CDY17754	Canola	cytosol	19.44	18.37
CDY30599	Canola	cytosol	19.34	18.32
CDY30779	Canola	cytosol	18.62	18.3
CDY31717	Canola	cytosol, plastid	19.44	18.05
CDY29004	Canola	cytosol	18.72	18.0
CDY23691	Canola	cytosol, plastid	19.65	17.98
CDX82979	Canola	cytosol, plastid	19.65	17.98
CDX77192	Canola	cytosol, plastid	19.24	17.88
CDX90660	Canola	cytosol	18.83	17.87
CDY45220	Canola	cytosol	18.62	17.83
CDX74009	Canola	cytosol	22.84	17.7
CDX75064	Canola	cytosol	18.31	17.64
CDX84151	Canola	cytosol	18.42	17.62
CDY03482	Canola	cytosol	17.28	17.59
CDY07951	Canola	cytosol	23.25	17.59
CDX93381	Canola	cytosol, plastid	18.72	16.53
CDY18447	Canola	cytosol, plastid	18.83	16.3
CDX87944	Canola	cytosol	20.58	15.82
CDY58692	Canola	nucleus	20.78	15.77
CDY55295	Canola	cytosol	20.58	15.76
CDY02183	Canola	nucleus	20.88	15.72
CDY47004	Canola	cytosol	20.27	15.61
CDY42843	Canola	cytosol	20.27	15.52
CDY18100	Canola	cytosol, plastid	20.47	15.23
CDY43743	Canola	nucleus	14.61	14.99
CDY56229	Canola	cytosol, plastid	20.06	14.83
CDY36055	Canola	plastid	16.15	14.8
CDX72728	Canola	cytosol	10.19	13.43
CDX82261	Canola	plastid	16.46	13.1
CDX75326	Canola	cytosol	4.22	11.26
CDY70999	Canola	cytosol, mitochondrion	8.02	10.51
CDY71066	Canola	cytosol, mitochondrion	7.92	10.41
CDX95855	Canola	cytosol	21.5	10.33
CDX92129	Canola	cytosol	20.06	10.2
CDY12957	Canola	cytosol	7.41	8.72
CDX99277	Canola	cytosol	23.77	8.54
CDX92299	Canola	cytosol	23.87	8.5
CDY02395	Canola	nucleus	2.16	3.12

Protein Annotations

MapMan:20.1.3.6	Gene3D:3.40.850.10	GO:A0A078EGB5	EnsemblPlants:CDY01095	ProteinID:CDY01095	ProteinID:CDY01095.1
ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003774	GO:GO:0003777	GO:GO:0003824
GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0007018	GO:GO:0008017	GO:GO:0008150
GO:GO:0009987	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00111144001	InterPro:IPR001752	InterPro:IPR036961	InterPro:Kinesin-like_fam
InterPro:Kinesin_motor_CS	InterPro:Kinesin_motor_dom	InterPro:Kinesin_motor_dom_sf	InterPro:P-loop_NTPase	PFAM:PF00225	PRINTS:PR00380
ScanProsite:PS00411	PFscan:PS50067	PANTHER:PTHR24115	PANTHER:PTHR24115:SF70	SMART:SM00129	SUPFAM:SSF52540
UniParc:UPI0004EE9AEA	SEG:seg	:	:	:	:

Description

BnaC05g41050D

Coordinates

chrLK031923:+:1122403..1130946

Molecular Weight (calculated)

109169.0 Da

IEP (calculated)

6.242

GRAVY (calculated)

-0.752

Length

972 amino acids

Sequence
(BLAST)

001: MMASSKQGSK SRKTGFSNFK GADSTASSTT SSSKLYQETS IDDGHSSPAS SSAQSKQHFF SPDSVPQSAQ RSKENVTVTV RFRPLSPREI RQGEEVAWYA
101: DGETIVRNEY NPTIAYAYDR VFGPTTTTRN VYDVAAHHVV NGAMEGINGT IFAYGVTSSG KTHTMHGDQR SPGIIPLAVK DAFSIIQETP NREFLLRISY
201: MEIYNEVVND LLNPAGHNLR IREDKQGTFV EGIKEEVVLS PAHALSLIAA GEEQRHVGST NYNLLSSRSH TIFTLTIESS PLGNKIKGEA VHLSQLNLVD
301: LAGSESSKVE TSGLRRKEGS YINKSLLTLG TVISKLTDVK ASHVPYRDSK LTRILQSSLS GHDRVSLICT VTPASSSSEE THNTLKFAHR AKHIEIQAEQ
401: NKIIDEKSLI KKYQHEIRQL KKELEQIKQD IVPIPQLNDI GTDDIILLKQ KLEDGQVKLQ SRLEEEEEAK AALLSRIQRL TKLILVSTKT SQTSRLPHRF
501: EPRRRHSFGE EELAYLPYKR RDLMDDEHLD LYVSPEGHHE IRDIACREEK KTRKHGLLNW LKPKKRDNSS STSDQSSVVK SNSTPSTPQG GGKNLHAESR
601: FSEGSPLMEQ FSEPKEDREA LEDTSHEMDT PEASSKMIDE LDLLREQKKI LSEAAALQSS SLKRLLDDAA KSPQNEEIKE EIKALNDDIK AKNDQIATLE
701: KQILDFVMTS HEALDKSDIV QALAEMRDQL NEKSFELEVK AADNNIIQEQ LNQKTCECEA LQEEVANLKQ ELSNALELAQ ETKIEELKQK AKELSESKEQ
801: LEHRNRKLAE ESSYAKGLAS AAAVELKALS EEVAKLMNHN ERLASELATL KSSVPQRGNK PGTTTATNVR NNGRRESLTK RQQEQESSSM ELKRELRMSK
901: ERERSYEAAL VDRDQREAEL ERIVEESKQR EAYLENELAS MWVLVSKLRR SQEGGSEISD SVSETLQTDR SF

Best Arabidopsis Sequence Match ( AT3G12020.4 )
(BLAST)

001: MASRQGSKSR KAGLKGADST ASSTTSSSKL YQETSIDGHS SPASSSAQSK QQFFSPDPLP QTAQRSKENV TVTVRFRPLS PREIRQGEEV AWYADGETIV
101: RNEHNPTIAY AYDRVFGPTT TTRNVYDIAA HHVVNGAMEG INGTIFAYGV TSSGKTHTMH GDQRSPGIIP LAVKDAFSII QETPNREFLL RISYMEIYNE
201: VVNDLLNPAG HNLRIREDKQ GTFVEGIKEE VVLSPAHALS LIAAGEEQRH VGSTNFNLLS SRSHTIFTLT IESSPLGDKS KGEAVHLSQL NLVDLAGSES
301: SKVETSGVRR KEGSYINKSL LTLGTVISKL TDVRASHVPY RDSKLTRILQ SSLSGHDRVS LICTVTPASS SSEETHNTLK FAHRAKHIEI QAEQNKIIDE
401: KSLIKKYQRE IRQLKEELEQ LKQEIVPVPQ LKDIGADDIV LLKQKLEDGQ VKLQSRLEEE EEAKAALLSR IQRLTKLILV STKNPQASRL PHRFNPRRRH
501: SFGEEELAYL PYKRRDMMDD EQLDLYVSVE GNHEIRDNAY REEKKTRKHG LLNWLKPKKR DHSSSASDQS SVVKSNSTPS TPQGGGSHLH TESRLSEGSP
601: LMEQLSEPRE DREALEDSSH EMEIPETSNK MSDELDLLRE QKKILSEEAA LQLSSLKRMS DEAAKSPQNE EINEEIKVLN DDIKAKNDQI ATLERQIMDF
701: VMTSHEALDK SDIMQAVAEL RDQLNEKSFE LEVKAADNRI IQQTLNEKTC ECEVLQEEVA NLKQQLSEAL ELAQGTKIKE LKQDAKELSE SKEQLELRNR
801: KLAEESSYAK GLASAAAVEL KALSEEVAKL MNQNERLAAE LATQKSPIAQ RNKTGTTTNV RNNGRRESLA KRQEHDSPSM ELKRELRMSK ERELSYEAAL
901: GEKEQREAEL ERILEETKQR EAYLENELAN MWVLVSKLRR SQGADSEISD SISETRQTEQ TEGSF

Arabidopsis Description

P-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4J8L2]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.