Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 2
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G365300.2 | Wheat | cytosol, mitochondrion, plastid | 98.7 | 98.8 |
| TraesCS6D01G314500.1 | Wheat | cytosol, mitochondrion, plastid | 98.4 | 98.5 |
| HORVU6Hr1G080920.22 | Barley | cytosol | 97.4 | 96.73 |
| KXG31200 | Sorghum | mitochondrion, plastid | 84.62 | 84.95 |
| Zm00001d018246_P015 | Maize | mitochondrion, plastid | 83.92 | 83.5 |
| Os02t0775400-01 | Rice | mitochondrion | 44.06 | 80.62 |
| GSMUA_Achr9P15980_001 | Banana | cytosol | 19.18 | 75.0 |
| Solyc03g053080.1.1 | Tomato | cytosol, plastid | 43.26 | 71.93 |
| TraesCS7A01G167100.1 | Wheat | mitochondrion | 67.03 | 67.92 |
| GSMUA_Achr3P07790_001 | Banana | cytosol, plastid | 69.13 | 66.35 |
| VIT_08s0007g06820.t01 | Wine grape | plastid | 65.33 | 65.53 |
| KRH71812 | Soybean | cytosol, plastid | 63.84 | 64.61 |
| KRG95428 | Soybean | plastid | 64.64 | 63.81 |
| KRH67102 | Soybean | plastid | 64.04 | 63.22 |
| CDY01095 | Canola | cytosol, plastid | 60.54 | 62.35 |
| CDY08463 | Canola | cytosol, plastid | 60.44 | 62.24 |
| Bra034785.1-P | Field mustard | cytosol | 60.14 | 62.06 |
| CDY04998 | Canola | plastid | 59.94 | 61.54 |
| Bra028723.1-P | Field mustard | plastid | 59.84 | 61.44 |
| CDY14073 | Canola | plastid | 59.94 | 61.41 |
| AT5G06670.1 | Thale cress | cytosol | 58.84 | 59.74 |
| AT3G12020.3 | Thale cress | cytosol, plastid | 61.34 | 58.81 |
| KRH38060 | Soybean | plastid | 36.26 | 57.99 |
| CDY47900 | Canola | cytosol | 39.86 | 57.74 |
| Bra038694.1-P | Field mustard | cytosol | 36.96 | 49.8 |
| TraesCS2A01G305500.2 | Wheat | plastid | 50.85 | 44.22 |
| GSMUA_Achr9P15970_001 | Banana | cytosol | 48.45 | 44.05 |
| TraesCS1A01G177600.1 | Wheat | plastid | 45.05 | 43.32 |
| TraesCS1A01G230600.1 | Wheat | cytosol | 16.88 | 26.45 |
| TraesCS6A01G389400.1 | Wheat | cytosol | 14.39 | 25.4 |
| TraesCS5A01G317000.1 | Wheat | cytosol | 18.08 | 20.52 |
| TraesCS6A01G103200.3 | Wheat | plastid | 19.08 | 20.11 |
| TraesCS6A01G239100.1 | Wheat | cytosol | 17.28 | 19.86 |
| TraesCS2A01G387400.1 | Wheat | nucleus | 18.38 | 19.74 |
| TraesCS5A01G161600.1 | Wheat | cytosol | 20.48 | 19.73 |
| TraesCS5A01G396100.1 | Wheat | plastid | 18.38 | 19.29 |
| TraesCS1A01G054400.2 | Wheat | cytosol | 19.08 | 17.87 |
| TraesCS5A01G157200.1 | Wheat | plastid | 18.98 | 17.86 |
| TraesCS5A01G223700.1 | Wheat | cytosol | 21.48 | 17.64 |
| TraesCS7A01G279000.1 | Wheat | cytosol | 17.58 | 17.5 |
| TraesCS7A01G270800.2 | Wheat | nucleus | 17.88 | 17.46 |
| TraesCS4A01G101200.2 | Wheat | cytosol, plastid | 17.38 | 16.45 |
| TraesCS2A01G275700.2 | Wheat | cytosol, plastid | 18.48 | 16.29 |
| TraesCS2A01G202400.1 | Wheat | cytosol | 19.68 | 15.51 |
| TraesCS5A01G390000.1 | Wheat | cytosol | 18.68 | 14.6 |
| TraesCS5A01G036600.1 | Wheat | mitochondrion | 15.38 | 14.04 |
| TraesCS2A01G149500.1 | Wheat | cytosol | 20.18 | 9.97 |
| TraesCS5A01G067300.1 | Wheat | cytosol | 21.98 | 7.3 |
Protein Annotations
| MapMan:20.1.3.6 | Gene3D:3.40.850.10 | ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003774 |
| GO:GO:0003777 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005524 | GO:GO:0007018 |
| GO:GO:0008017 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016787 | InterPro:IPR001752 | InterPro:IPR036961 |
| InterPro:Kinesin-like_fam | InterPro:Kinesin_motor_CS | InterPro:Kinesin_motor_dom | InterPro:Kinesin_motor_dom_sf | InterPro:P-loop_NTPase | PFAM:PF00225 |
| PRINTS:PR00380 | ScanProsite:PS00411 | PFscan:PS50067 | PANTHER:PTHR24115 | PANTHER:PTHR24115:SF70 | SMART:SM00129 |
| SUPFAM:SSF52540 | EnsemblPlantsGene:TraesCS6A01G334900 | EnsemblPlants:TraesCS6A01G334900.3 | TIGR:cd01374 | SEG:seg | : |
Description
No Description!
Coordinates
chr6A:-:565468239..565480294
Molecular Weight (calculated)
111044.0 Da
IEP (calculated)
6.177
GRAVY (calculated)
-0.696
Length
1001 amino acids
Sequence
(BLAST)
(BLAST)
0001: MATRPASRQR KASSAAKGSH QQVQQSGSPT STATTSSSRL TPEMMSSLEG PASPRLVAGL DAADADDDQA ATKENVTVTV RFRPLSPREI RQGEEVAWYA
0101: DGDTVVRSEQ NPNVGYAYDR VFAPTTTTRQ VYDVAAQHVV SGAMEGIYGT IFAYGVTSSG KTHTMHGDQR SPGIIPLAVK DAFSIIQETP NREFLLRVSY
0201: LEIYNEVVND LLNPAGQSLR IREDPQGTFV EGMKEEVVLS PAHALSLIAA GEEHRHVGST NFNLLSSRSH TIFTLTIESS SYGDSNEGEA VTFSQLNLID
0301: LAGSESSRAE TTGVRRKEGS YINKSLLTLG TVISKLTDGK ATHIPFRDSK LTRLLQSSLS GQGRVSLICT VTPASSNSEE THNTLKFAHR AKRIEVQASQ
0401: NKIIDEKSLI KKYQNEIRRL KEELEQLKMG IITGTPLKDA EDDNMILWKQ KLEDGNVKLQ SRLEQEEEAK SALLARIQRL TKLILVSTKA TPTSRFSPHP
0501: GPRRRHSFGE EELAYLPYRR RDIMLDNESN ELLTPGEGFG VTPEDSSKEE KKNRKGLLNW FKIRKRDGGA STLTSSECDK SSLTKSTAPS TPIGESLNFP
0601: AEPRISTSLV NESESADMLS IGHGDFPSDG LTGEEASLAS TKTIDHVDLL REQLKILSGE VALHTSVLKR LTEEAGRNPN SEKIQMKMKK ISDEIKAKQQ
0701: QISSLEKQMP HSLSNSQVKV DKLDLSPSYG ELLEQLNEKS FELEVKVADN RVIQEQLQEK TTECMELQEA VACLKEHLSQ ALQAKDSLSN SIMMQNSSGV
0801: NHEEQHSDQE KPVSRDISAE QLQKEQQSLE LGELKQRVHE LTEVKAQLEA RNQKLLEEST YAKGLASAAG VELKALSEEV TKLMNQNEKL ASELASQRSP
0901: TPRRVSNGPR GTARRESMSR RNEPASRRDG NAREERERAL ETIITEKEQK EAELQRKVEE SKQKEAFLES ELANMWVLVA KLKKSRGDDD HEDLEAKYNG
1001: S
0101: DGDTVVRSEQ NPNVGYAYDR VFAPTTTTRQ VYDVAAQHVV SGAMEGIYGT IFAYGVTSSG KTHTMHGDQR SPGIIPLAVK DAFSIIQETP NREFLLRVSY
0201: LEIYNEVVND LLNPAGQSLR IREDPQGTFV EGMKEEVVLS PAHALSLIAA GEEHRHVGST NFNLLSSRSH TIFTLTIESS SYGDSNEGEA VTFSQLNLID
0301: LAGSESSRAE TTGVRRKEGS YINKSLLTLG TVISKLTDGK ATHIPFRDSK LTRLLQSSLS GQGRVSLICT VTPASSNSEE THNTLKFAHR AKRIEVQASQ
0401: NKIIDEKSLI KKYQNEIRRL KEELEQLKMG IITGTPLKDA EDDNMILWKQ KLEDGNVKLQ SRLEQEEEAK SALLARIQRL TKLILVSTKA TPTSRFSPHP
0501: GPRRRHSFGE EELAYLPYRR RDIMLDNESN ELLTPGEGFG VTPEDSSKEE KKNRKGLLNW FKIRKRDGGA STLTSSECDK SSLTKSTAPS TPIGESLNFP
0601: AEPRISTSLV NESESADMLS IGHGDFPSDG LTGEEASLAS TKTIDHVDLL REQLKILSGE VALHTSVLKR LTEEAGRNPN SEKIQMKMKK ISDEIKAKQQ
0701: QISSLEKQMP HSLSNSQVKV DKLDLSPSYG ELLEQLNEKS FELEVKVADN RVIQEQLQEK TTECMELQEA VACLKEHLSQ ALQAKDSLSN SIMMQNSSGV
0801: NHEEQHSDQE KPVSRDISAE QLQKEQQSLE LGELKQRVHE LTEVKAQLEA RNQKLLEEST YAKGLASAAG VELKALSEEV TKLMNQNEKL ASELASQRSP
0901: TPRRVSNGPR GTARRESMSR RNEPASRRDG NAREERERAL ETIITEKEQK EAELQRKVEE SKQKEAFLES ELANMWVLVA KLKKSRGDDD HEDLEAKYNG
1001: S
001: MASRQGSKSR KAGLKGADST ASSTTSSSKL YQETSIDGHS SPASSSAQSK QQFFSPDPLP QTAQRSKENV TVTVRFRPLS PREIRQGEEV AWYADGETIV
101: RNEHNPTIAY AYDRVFGPTT TTRNVYDIAA HHVVNGAMEG INGTIFAYGV TSSGKTHTMH GDQRSPGIIP LAVKDAFSII QETPNREFLL RISYMEIYNE
201: VVNDLLNPAG HNLRIREDKQ GTFVEGIKEE VVLSPAHALS LIAAGEEQRH VGSTNFNLLS SRSHTIFTLT IESSPLGDKS KGEAVHLSQL NLVDLAGSES
301: SKVETSGVRR KEGSYINKSL LTLGTVISKL TDVRASHVPY RDSKLTRILQ SSLSGHDRVS LICTVTPASS SSEETHNTLK FAHRAKHIEI QAEQNKIIDE
401: KSLIKKYQRE IRQLKEELEQ LKQEIVPVPQ LKDIGADDIV LLKQKLEDGQ VKLQSRLEEE EEAKAALLSR IQRLTKLILV STKNPQASRL PHRFNPRRRH
501: SFGEEELAYL PYKRRDMMDD EQLDLYVSVE GNHEIRDNAY REEKKTRKHG LLNWLKPKKR DHSSSASDQS SVVKSNSTPS TPQGGGSHLH TESRLSEGSP
601: LMEQLSEPRE DREALEDSSH EMEIPETSNK MSDELDLLRE QKKILSEEAA LQLSSLKRMS DEAAKSPQNE EINEEIKVLN DDIKAKNDQI ATLERQIMDF
701: VMTSHEALDK SDIMQAVAEL RDQLNEKSFE LEVKAADNRI IQQTLNEKTC ECEVLQEEVA NLKQQLSEAL ELAQGTKIKE LKQDAKELSE SKEQLELRNR
801: KLAEESSYAK GLASAAAVEL KALSEEVAKL MNQNERLAAE LATQKSPIAQ RNKTGTTTNV RNNGRRESLA KRQEHDSPSM ELKRELRMSK ERELSYEAAL
901: GEKEQREAEL ERILEETKQR EAYLENELAN MWVLVSKLRR SQGADSEISD SISETRQTEQ TEGSF
101: RNEHNPTIAY AYDRVFGPTT TTRNVYDIAA HHVVNGAMEG INGTIFAYGV TSSGKTHTMH GDQRSPGIIP LAVKDAFSII QETPNREFLL RISYMEIYNE
201: VVNDLLNPAG HNLRIREDKQ GTFVEGIKEE VVLSPAHALS LIAAGEEQRH VGSTNFNLLS SRSHTIFTLT IESSPLGDKS KGEAVHLSQL NLVDLAGSES
301: SKVETSGVRR KEGSYINKSL LTLGTVISKL TDVRASHVPY RDSKLTRILQ SSLSGHDRVS LICTVTPASS SSEETHNTLK FAHRAKHIEI QAEQNKIIDE
401: KSLIKKYQRE IRQLKEELEQ LKQEIVPVPQ LKDIGADDIV LLKQKLEDGQ VKLQSRLEEE EEAKAALLSR IQRLTKLILV STKNPQASRL PHRFNPRRRH
501: SFGEEELAYL PYKRRDMMDD EQLDLYVSVE GNHEIRDNAY REEKKTRKHG LLNWLKPKKR DHSSSASDQS SVVKSNSTPS TPQGGGSHLH TESRLSEGSP
601: LMEQLSEPRE DREALEDSSH EMEIPETSNK MSDELDLLRE QKKILSEEAA LQLSSLKRMS DEAAKSPQNE EINEEIKVLN DDIKAKNDQI ATLERQIMDF
701: VMTSHEALDK SDIMQAVAEL RDQLNEKSFE LEVKAADNRI IQQTLNEKTC ECEVLQEEVA NLKQQLSEAL ELAQGTKIKE LKQDAKELSE SKEQLELRNR
801: KLAEESSYAK GLASAAAVEL KALSEEVAKL MNQNERLAAE LATQKSPIAQ RNKTGTTTNV RNNGRRESLA KRQEHDSPSM ELKRELRMSK ERELSYEAAL
901: GEKEQREAEL ERILEETKQR EAYLENELAN MWVLVSKLRR SQGADSEISD SISETRQTEQ TEGSF
Arabidopsis Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4J8L2]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.