CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 3
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d018246_P015	Maize	mitochondrion, plastid	95.69	94.83
TraesCS6A01G334900.3	Wheat	cytosol, plastid	84.95	84.62
TraesCS6B01G365300.2	Wheat	cytosol, mitochondrion, plastid	84.75	84.5
TraesCS6D01G314500.1	Wheat	cytosol, mitochondrion, plastid	84.55	84.3
HORVU6Hr1G080920.22	Barley	cytosol	85.06	84.13
Os02t0775400-01	Rice	mitochondrion	46.14	84.1
GSMUA_Achr9P15980_001	Banana	cytosol	20.06	78.12
Solyc03g053080.1.1	Tomato	cytosol, plastid	44.43	73.59
GSMUA_Achr3P07790_001	Banana	cytosol, plastid	70.31	67.21
VIT_08s0007g06820.t01	Wine grape	plastid	66.6	66.53
KRH71812	Soybean	cytosol, plastid	65.0	65.52
KRG95428	Soybean	plastid	65.6	64.5
KRH67102	Soybean	plastid	64.79	63.71
CDY01095	Canola	cytosol, plastid	61.69	63.27
CDY08463	Canola	cytosol, plastid	61.58	63.17
Bra034785.1-P	Field mustard	cytosol	61.28	62.99
Bra028723.1-P	Field mustard	plastid	61.38	62.77
CDY04998	Canola	plastid	61.28	62.67
CDY14073	Canola	plastid	61.28	62.54
AT5G06670.1	Thale cress	cytosol	60.18	60.85
AT3G12020.3	Thale cress	cytosol, plastid	62.79	59.96
KRH38060	Soybean	plastid	37.01	58.95
CDY47900	Canola	cytosol	40.52	58.47
Bra038694.1-P	Field mustard	cytosol	36.91	49.53
EES12188	Sorghum	plastid	53.76	46.33
KXG38192	Sorghum	plastid	46.94	44.61
GSMUA_Achr9P15970_001	Banana	cytosol	48.04	43.51
KXG28623	Sorghum	cytosol	18.66	29.25
EER89062	Sorghum	cytosol	19.76	20.74
KXG26789	Sorghum	nucleus	18.86	19.77
KXG31119	Sorghum	cytosol	17.45	19.73
OQU89071	Sorghum	cytosol	20.36	19.67
KXG36051	Sorghum	cytosol	17.75	19.18
KXG25443	Sorghum	cytosol	18.46	17.95
EES14087	Sorghum	cytosol	18.15	17.94
KXG35645	Sorghum	cytosol	21.46	17.44
EES09071	Sorghum	plastid	19.16	17.41
EES18930	Sorghum	cytosol	18.36	17.4
KXG25952	Sorghum	cytosol, plastid	18.66	16.37
OQU78566	Sorghum	cytosol	19.06	16.25
EER95074	Sorghum	cytosol, plastid	17.15	16.16
OQU90984	Sorghum	cytosol	19.06	15.18
KXG30782	Sorghum	cytosol	19.06	15.02
EER91274	Sorghum	mitochondrion	15.85	14.03
KXG36788	Sorghum	plastid	20.56	10.64
OQU79463	Sorghum	cytosol	21.26	7.87

Protein Annotations

MapMan:20.1.3.6	Gene3D:3.40.850.10	UniProt:A0A194YTM3	ncoils:Coil	GO:GO:0000166	GO:GO:0003674
GO:GO:0003774	GO:GO:0003777	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005856	GO:GO:0005874	GO:GO:0007018
GO:GO:0008017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016787	InterPro:IPR001752	InterPro:IPR036961
EnsemblPlants:KXG31200	ProteinID:KXG31200	ProteinID:KXG31200.1	InterPro:Kinesin-like_fam	InterPro:Kinesin_motor_CS	InterPro:Kinesin_motor_dom
InterPro:Kinesin_motor_dom_sf	InterPro:P-loop_NTPase	PFAM:PF00225	PRINTS:PR00380	ScanProsite:PS00411	PFscan:PS50067
PANTHER:PTHR24115	PANTHER:PTHR24115:SF70	SMART:SM00129	EnsemblPlantsGene:SORBI_3004G315700	SUPFAM:SSF52540	UniParc:UPI0007F2658B
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:-:65175753..65186781

Molecular Weight (calculated)

110608.0 Da

IEP (calculated)

6.529

GRAVY (calculated)

-0.674

Length

997 amino acids

Sequence
(BLAST)

001: MATRPASRQR KAGHASAVAA GPKGLHQQQP PQSGSPTSTT TTTTSSSRLT PELSLDGPVS PLFAGLDEDP APKENVTVTV RFRPLSPREI RQGEEVAWYA
101: DGDTVVRSEQ NPSVAYAYDR VFAPTTTTRH VYDVAAQHVV SGAMEGVNGT IFAYGVTSSG KTHTMHGDQR SPGIIPLAVK DAFSIIQETP NREFLLRVSY
201: LEIYNEVVND LLNPAGQNLR IREDPQGTFV EGIKEEVVLS PAHALSLIAA GEEHRHVGST NFNLLSSRSH TIFTLTIESS PCGEANEGEA VTFSQLNLID
301: LAGSESSRAE TTGVRRKEGS YINKSLLTLG TVISKLTDGK ATHIPFRDSK LTRLLQSSLS GQGRVSLICT VTPASSNSEE THNTLKFAHR AKRIEIQASQ
401: NKIIDEKSLI KKYQTEIRRL KEELEQLKMG IITGTPSKDT EEDNIILWKQ KLEDGNVKLQ SRLEQEEEAK AALLARIQRL TKLILVSTKA TPTSRFSPHP
501: GPRRRHSFGE EELAYLPYRR RDIMMDNESN ELLLPVEGFG VSLEDSSKEE KKNRKGLLNW FKLRKRDGAS ILTSSEGDKS SLTKSTAPST PIGESINFPA
601: EPRISNSLAG ENVSADLFSI GHGEFPSGSI HGEETPLASG KTMDHVDLLR EQLKILAGEV AFNTSALKRL TEEAGRSPKN EKIQMEMKKK TDEIKGKQQQ
701: IASLEREIAH ATLGTQGKVD KLELSPSYHE LLEQLNEKSF ELEVKAADNR VIQDQLNEKI SECMELQAEV THLKEQLSQA LEAKDLLSNS MIQNNRVNQE
801: VEHHAGQNVP REISSEPQQK QQQSVEINEL KQKVSELIEI KAQLEDRNQK LLEESTYAKG LASAAGVELK ALSEEVTKLM NQNEKLATDL SSLRSPTPAP
901: RRVSNGPRGT RRESMSRRHE PASRRDTNAN HEREKALETM LMEKEQKEAE LQRKVEESKQ KEAFLESELA NMWVLVAKLK KSQGYDHEDP EAKNDGS

Best Arabidopsis Sequence Match ( AT3G12020.4 )
(BLAST)

001: MASRQGSKSR KAGLKGADST ASSTTSSSKL YQETSIDGHS SPASSSAQSK QQFFSPDPLP QTAQRSKENV TVTVRFRPLS PREIRQGEEV AWYADGETIV
101: RNEHNPTIAY AYDRVFGPTT TTRNVYDIAA HHVVNGAMEG INGTIFAYGV TSSGKTHTMH GDQRSPGIIP LAVKDAFSII QETPNREFLL RISYMEIYNE
201: VVNDLLNPAG HNLRIREDKQ GTFVEGIKEE VVLSPAHALS LIAAGEEQRH VGSTNFNLLS SRSHTIFTLT IESSPLGDKS KGEAVHLSQL NLVDLAGSES
301: SKVETSGVRR KEGSYINKSL LTLGTVISKL TDVRASHVPY RDSKLTRILQ SSLSGHDRVS LICTVTPASS SSEETHNTLK FAHRAKHIEI QAEQNKIIDE
401: KSLIKKYQRE IRQLKEELEQ LKQEIVPVPQ LKDIGADDIV LLKQKLEDGQ VKLQSRLEEE EEAKAALLSR IQRLTKLILV STKNPQASRL PHRFNPRRRH
501: SFGEEELAYL PYKRRDMMDD EQLDLYVSVE GNHEIRDNAY REEKKTRKHG LLNWLKPKKR DHSSSASDQS SVVKSNSTPS TPQGGGSHLH TESRLSEGSP
601: LMEQLSEPRE DREALEDSSH EMEIPETSNK MSDELDLLRE QKKILSEEAA LQLSSLKRMS DEAAKSPQNE EINEEIKVLN DDIKAKNDQI ATLERQIMDF
701: VMTSHEALDK SDIMQAVAEL RDQLNEKSFE LEVKAADNRI IQQTLNEKTC ECEVLQEEVA NLKQQLSEAL ELAQGTKIKE LKQDAKELSE SKEQLELRNR
801: KLAEESSYAK GLASAAAVEL KALSEEVAKL MNQNERLAAE LATQKSPIAQ RNKTGTTTNV RNNGRRESLA KRQEHDSPSM ELKRELRMSK ERELSYEAAL
901: GEKEQREAEL ERILEETKQR EAYLENELAN MWVLVSKLRR SQGADSEISD SISETRQTEQ TEGSF

Arabidopsis Description

P-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4J8L2]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.