Factsheet for AT3G12020.3

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plastid

Predictor Summary:

plastid 4
cytosol 4
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY08463	Canola	cytosol, plastid	82.95	89.09
Bra034785.1-P	Field mustard	cytosol	82.76	89.07
CDY01095	Canola	cytosol, plastid	82.85	88.99
Os06t0206700-01	Rice	cytosol	23.08	74.84
Solyc03g053080.1.1	Tomato	cytosol, plastid	43.1	74.75
AT5G06670.1	Thale cress	cytosol	69.92	74.04
VIT_08s0007g06820.t01	Wine grape	plastid	69.35	72.55
KRG95428	Soybean	plastid	66.86	68.84
KRH71812	Soybean	cytosol, plastid	64.46	68.05
KRH67102	Soybean	plastid	65.42	67.36
Os02t0775400-01	Rice	mitochondrion	34.96	66.73
KXG31200	Sorghum	mitochondrion, plastid	59.96	62.79
Zm00001d018246_P015	Maize	mitochondrion, plastid	60.25	62.52
GSMUA_Achr3P07790_001	Banana	cytosol, plastid	61.3	61.36
TraesCS6A01G334900.3	Wheat	cytosol, plastid	58.81	61.34
TraesCS6B01G365300.2	Wheat	cytosol, mitochondrion, plastid	58.72	61.3
Zm00001d044982_P009	Maize	cytosol	56.23	61.15
TraesCS6D01G314500.1	Wheat	cytosol, mitochondrion, plastid	58.52	61.1
HORVU6Hr1G080920.22	Barley	cytosol	58.62	60.71
KRH38060	Soybean	plastid	34.96	58.31
TraesCS7D01G167700.1	Wheat	cytosol, plastid	54.41	58.26
TraesCS7A01G167100.1	Wheat	mitochondrion	54.98	58.1
TraesCS7B01G071700.1	Wheat	plastid	54.41	57.66
HORVU7Hr1G034990.1	Barley	plastid	54.02	57.2
AT1G21730.1	Thale cress	plastid	42.43	49.78
AT4G39050.1	Thale cress	plastid	44.64	44.17
AT2G21380.2	Thale cress	plastid	43.49	42.91
AT1G59540.1	Thale cress	cytosol	18.3	23.21
AT3G43210.5	Thale cress	cytosol	18.87	21.0
AT4G38950.1	Thale cress	nucleus	16.48	20.57
AT2G21300.1	Thale cress	nucleus	16.95	20.53
AT5G47820.1	Thale cress	cytosol	19.54	19.71
AT1G18370.1	Thale cress	plastid	17.91	19.2
AT3G10180.1	Thale cress	cytosol	22.61	18.54
AT3G50240.1	Thale cress	plastid	18.39	18.27
AT3G45850.1	Thale cress	cytosol, plastid	18.2	17.84
AT5G66310.1	Thale cress	cytosol	17.91	17.59
AT2G28620.2	Thale cress	cytosol, plastid	17.43	17.47
AT2G37420.2	Thale cress	cytosol	17.05	17.13
AT2G36200.2	Thale cress	cytosol	17.05	17.12
AT3G51150.2	Thale cress	cytosol	17.15	16.98
AT4G24170.1	Thale cress	cytosol	16.28	16.93
AT3G44050.1	Thale cress	cytosol, plastid	18.87	15.6
AT3G23670.1	Thale cress	cytosol	19.16	15.23
AT5G60930.2	Thale cress	cytosol	18.97	14.83
AT4G14150.1	Thale cress	cytosol, plastid	18.2	14.71
AT3G20150.1	Thale cress	plastid	15.42	14.45
AT5G42490.1	Thale cress	cytosol	13.12	12.6
AT3G17360.3	Thale cress	cytosol	20.31	10.22
AT3G19050.1	Thale cress	cytosol	21.93	8.26

Protein Annotations

MapMan:20.1.3.6	Gene3D:3.40.850.10	EntrezGene:820376	ProteinID:AEE75138.1	ProteinID:ANM63542.1	ArrayExpress:AT3G12020
EnsemblPlantsGene:AT3G12020	RefSeq:AT3G12020	TAIR:AT3G12020	RefSeq:AT3G12020-TAIR-G	EnsemblPlants:AT3G12020.3	Unigene:At.43261
ncoils:Coil	UniProt:F4J8L2	GO:GO:0000166	GO:GO:0003674	GO:GO:0003774	GO:GO:0003777
GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005856	GO:GO:0005871	GO:GO:0007018	GO:GO:0008017	GO:GO:0008150
GO:GO:0009987	GO:GO:0016787	GO:GO:0016887	InterPro:IPR001752	InterPro:IPR036961	InterPro:Kinesin-like_fam
InterPro:Kinesin_motor_CS	InterPro:Kinesin_motor_dom	InterPro:Kinesin_motor_dom_sf	RefSeq:NP_001189866.1	RefSeq:NP_001319527.1	InterPro:P-loop_NTPase
PFAM:PF00225	PRINTS:PR00380	ScanProsite:PS00411	PFscan:PS50067	PANTHER:PTHR24115	PANTHER:PTHR24115:SF70
SMART:SM00129	SUPFAM:SSF52540	UniParc:UPI0001E92DF8	SEG:seg	:	:

Description

P-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4J8L2]

Coordinates

chr3:+:3826148..3834318

Molecular Weight (calculated)

117874.0 Da

IEP (calculated)

6.324

GRAVY (calculated)

-0.656

Length

1044 amino acids

Sequence
(BLAST)

0001: MASRQGSKSR KAGLKGADST ASSTTSSSKL YQETSIDGHS SPASSSAQSK QQFFSPDPLP QTAQRSKENV TVTVRFRPLS PREIRQGEEV AWYADGETIV
0101: RNEHNPTIAY AYDRVFGPTT TTRNVYDIAA HHVVNGAMEG INGTIFAYGV TSSGKTHTMH GDQRSPGIIP LAVKDAFSII QETPNREFLL RISYMEIYNE
0201: VVNDLLNPAG HNLRIREDKQ GTFVEGIKEE VVLSPAHALS LIAAGEEQRH VGSTNFNLLS SRSHTIFTLT IESSPLGDKS KGEAVHLSQL NLVDLAGSES
0301: SKVETSGVRR KEGSYINKSL LTLGTVISKL TDVRASHVPY RDSKLTRILQ SSLSGHDRVS LICTVTPASS SSEETHNTLK FAHRAKHIEI QAEQNKIIDE
0401: KSLIKKYQRE IRQLKEELEQ LKQEIVPVPQ LKDIGADDIV LLKQKLEDGQ VKLQSRLEEE EEAKAALLSR IQRLTKLILV STKNPQASRL PHRFNPRRRH
0501: SFGEEELAYL PYKRRDMMDD EQLDLYVSVE GNHEIRDNAY REEKKTRKHG LLNWLKPKKR DHSSSASDQS SVVKSNSTPS TPQGGGSHLH TESRLSEGSP
0601: LMEQLSEPRE DREALEDSSH EMEIPETSNK MSDELDLLRE QKKILSEEAA LQLSSLKRMS DEAAKSPQNE EINEEIKVLN DDIKAKNDQI ATLERQIMDF
0701: VMTSHEALDK SDIMQAVAEL RDQLNEKSFE LEVIELFLFM QFFFIYAEVR DGFAIAWIRL FILAQYYLSS YLNKVSSVYI IKYQYSKRQT ILTMKLMVCS
0801: TLFSHSSSCL QVKAADNRII QQTLNEKTCE CEVLQEEVAN LKQQLSEALE LAQGTKIKEL KQDAKELSES KEQLELRNRK LAEESSYAKG LASAAAVELK
0901: ALSEEVAKLM NQNERLAAEL ATQKSPIAQR NKTGTTTNVR NNGRRESLAK RQEHDSPSME LKRELRMSKE RELSYEAALG EKEQREAELE RILEETKQRE
1001: AYLENELANM WVLVSKLRRS QGADSEISDS ISETRQTEQT EGSF

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.