Factsheet for VIT_08s0007g06820.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 1
cytosol 3
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P15980_001	Banana	cytosol	21.24	82.81
Solyc03g053080.1.1	Tomato	cytosol, plastid	49.3	81.73
Os06t0206700-01	Rice	cytosol	25.35	78.57
Os02t0775400-01	Rice	mitochondrion	38.78	70.75
AT5G06670.1	Thale cress	cytosol	69.34	70.18
AT3G12020.3	Thale cress	cytosol, plastid	72.55	69.35
KRH38060	Soybean	plastid	41.78	66.61
KXG31200	Sorghum	mitochondrion, plastid	66.53	66.6
Zm00001d018246_P015	Maize	mitochondrion, plastid	66.63	66.1
Zm00001d044982_P009	Maize	cytosol	63.23	65.73
TraesCS6B01G365300.2	Wheat	cytosol, mitochondrion, plastid	65.63	65.5
TraesCS6D01G314500.1	Wheat	cytosol, mitochondrion, plastid	65.53	65.4
TraesCS6A01G334900.3	Wheat	cytosol, plastid	65.53	65.33
HORVU6Hr1G080920.22	Barley	cytosol	65.63	64.98
CDY47900	Canola	cytosol	43.89	63.39
TraesCS7B01G071700.1	Wheat	plastid	61.12	61.93
TraesCS7D01G167700.1	Wheat	cytosol, plastid	60.22	61.64
TraesCS7A01G167100.1	Wheat	mitochondrion	60.92	61.54
HORVU7Hr1G034990.1	Barley	plastid	60.42	61.16
Bra038694.1-P	Field mustard	cytosol	41.28	55.45
VIT_18s0001g02380.t01	Wine grape	plastid	55.51	48.94
VIT_03s0038g00350.t01	Wine grape	plastid	49.2	44.6
GSMUA_Achr9P15970_001	Banana	cytosol	47.8	43.32
VIT_16s0050g02080.t01	Wine grape	cytosol, mitochondrion	6.31	27.63
VIT_18s0001g08700.t01	Wine grape	cytosol	19.84	23.57
VIT_11s0016g00460.t01	Wine grape	cytosol	19.64	20.78
VIT_17s0000g03290.t01	Wine grape	cytosol, plastid	19.14	19.85
VIT_03s0038g00700.t01	Wine grape	nucleus	19.14	19.71
VIT_18s0001g13580.t01	Wine grape	cytosol	18.84	19.34
VIT_06s0004g03810.t01	Wine grape	plastid	20.14	19.14
VIT_04s0023g03060.t01	Wine grape	cytosol	18.54	19.01
VIT_08s0007g05340.t01	Wine grape	cytosol	23.65	18.88
VIT_18s0001g10090.t01	Wine grape	cytosol	20.34	18.85
VIT_07s0031g00130.t01	Wine grape	cytosol	20.04	18.54
VIT_08s0007g03090.t01	Wine grape	nucleus	18.74	18.53
VIT_08s0040g02590.t01	Wine grape	plastid	18.74	17.83
VIT_05s0029g00400.t01	Wine grape	cytosol, plastid	21.04	15.67
VIT_18s0001g07550.t01	Wine grape	cytosol	18.64	15.58
VIT_19s0090g01600.t01	Wine grape	cytosol, plastid	18.44	15.37
VIT_06s0009g00820.t01	Wine grape	cytosol	20.64	14.16
VIT_05s0020g00620.t01	Wine grape	cytosol	19.24	9.88
VIT_03s0063g01120.t01	Wine grape	cytosol	24.25	9.01

Protein Annotations

EntrezGene:100257143	wikigene:100257143	MapMan:20.1.3.6	Gene3D:3.40.850.10	ProteinID:CBI29990	ProteinID:CBI29990.3
ncoils:Coil	UniProt:D7TIB4	EMBL:FN595991	GO:GO:0000166	GO:GO:0003674	GO:GO:0003774
GO:GO:0003777	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005856	GO:GO:0005871	GO:GO:0005874	GO:GO:0007018
GO:GO:0008017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016787	GO:GO:0016887	InterPro:IPR001752
InterPro:IPR036961	InterPro:Kinesin-like_fam	InterPro:Kinesin_motor_CS	InterPro:Kinesin_motor_dom	InterPro:Kinesin_motor_dom_sf	EntrezGene:LOC100257143
wikigene:LOC100257143	InterPro:P-loop_NTPase	PFAM:PF00225	PRINTS:PR00380	ScanProsite:PS00411	PFscan:PS50067
PANTHER:PTHR24115	PANTHER:PTHR24115:SF70	SMART:SM00129	SUPFAM:SSF52540	TIGR:TC64071	UniParc:UPI0001BE35B3
ArrayExpress:VIT_08s0007g06820	EnsemblPlantsGene:VIT_08s0007g06820	EnsemblPlants:VIT_08s0007g06820.t01	RefSeq:XP_003632720	RefSeq:XP_003632720.1	RefSeq:XP_010653873.1
RefSeq:XP_010653874.1	SEG:seg	:	:	:	:

Description

Kinesin-like protein [Source:UniProtKB/TrEMBL;Acc:D7TIB4]

Coordinates

chr8:-:20474633..20492921

Molecular Weight (calculated)

111147.0 Da

IEP (calculated)

6.695

GRAVY (calculated)

-0.658

Length

998 amino acids

Sequence
(BLAST)

001: MASRQGSKSK RTGSSTLKAA NSPSSSTTSS SKHFLETSID GLSSPASSSA RSKPQYFYSE SLPLDTERSK ENVTVTVRFR PLSQREIRQG EEIAWYADGE
101: TIVRNEHNPS IAYAYDRVFG PTTTTRHVYD VAAQHIVGGA MEGINGTIFA YGVTSSGKTH TMHGDQRSPG IIPLAVKDAF SIIQETPSRE FLLRVSYLEI
201: YNEVVNDLLN PAGQNLRIRE DLQGTFVEGI KEEVVLSPAH ALSLIAAGEE HRHVGSTNFN LLSSRSHTIF TLTIESSPCG ENSEGEAVNL SQLNLIDLAG
301: SESSRAETTG VRRKEGSYIN KSLLTLGTVI SKLTDGRATH IPYRDSKLTR LLQSSLSGHG RVSLICTVTP SSSNSEETHN TLKFAHRAKH IEIQAAQNKI
401: IDEKSLIKKY QNEIRSLKEE LDQLKRGIVV PRLTNKGEDD LVLLKQKLED GQVRLQSRLE QEEEAKAALL GRIQRLTKLI LVSTKTSQPS RLPQRPGPRR
501: RHSFGEEELA YLPYKRRDLI LDDENIDLYV SLEGNAETPD DTLKEEKKTR KHGLLNWLKL RKRDSGTGSP SDKSSGIKSI STPSTPQADS VNLPTESRLS
601: HSLLTEGSPI DLFSETRQDR EVPVDDFLGQ ETPLTSIKTM DQIDLLREQQ KILSGEVALH SSALKRLSEE AAKNPRKEQI HVEMRKLNDE IKGKNEQIAL
701: LEKQIADSIA ASHNKMDKLE ISQSISELVG QLNEKSFELE VKVADNRIIQ EQLNQKSHEC EGLQETVASL KQQLSEALES RNVSPVIGHE LHTETKNTVQ
801: AQAAEIEDLK QKLTEVTESK EQLEFRNQKL AEESSYAKGL ASAAAVELKA LSEEVAKLMN QNERLAAELA AQKNSPNNRR AISAPRNGRR DSHIKRADQG
901: VSPADVKREL ALSRERELSY EASLLERDQR EAELQIKVEE SKQREAYLEN ELANMWVLVA KLKKSQGAES GVSDSTRETQ RVDSFGIWNE SMVTKGFQ

Best Arabidopsis Sequence Match ( AT3G12020.4 )
(BLAST)

001: MASRQGSKSR KAGLKGADST ASSTTSSSKL YQETSIDGHS SPASSSAQSK QQFFSPDPLP QTAQRSKENV TVTVRFRPLS PREIRQGEEV AWYADGETIV
101: RNEHNPTIAY AYDRVFGPTT TTRNVYDIAA HHVVNGAMEG INGTIFAYGV TSSGKTHTMH GDQRSPGIIP LAVKDAFSII QETPNREFLL RISYMEIYNE
201: VVNDLLNPAG HNLRIREDKQ GTFVEGIKEE VVLSPAHALS LIAAGEEQRH VGSTNFNLLS SRSHTIFTLT IESSPLGDKS KGEAVHLSQL NLVDLAGSES
301: SKVETSGVRR KEGSYINKSL LTLGTVISKL TDVRASHVPY RDSKLTRILQ SSLSGHDRVS LICTVTPASS SSEETHNTLK FAHRAKHIEI QAEQNKIIDE
401: KSLIKKYQRE IRQLKEELEQ LKQEIVPVPQ LKDIGADDIV LLKQKLEDGQ VKLQSRLEEE EEAKAALLSR IQRLTKLILV STKNPQASRL PHRFNPRRRH
501: SFGEEELAYL PYKRRDMMDD EQLDLYVSVE GNHEIRDNAY REEKKTRKHG LLNWLKPKKR DHSSSASDQS SVVKSNSTPS TPQGGGSHLH TESRLSEGSP
601: LMEQLSEPRE DREALEDSSH EMEIPETSNK MSDELDLLRE QKKILSEEAA LQLSSLKRMS DEAAKSPQNE EINEEIKVLN DDIKAKNDQI ATLERQIMDF
701: VMTSHEALDK SDIMQAVAEL RDQLNEKSFE LEVKAADNRI IQQTLNEKTC ECEVLQEEVA NLKQQLSEAL ELAQGTKIKE LKQDAKELSE SKEQLELRNR
801: KLAEESSYAK GLASAAAVEL KALSEEVAKL MNQNERLAAE LATQKSPIAQ RNKTGTTTNV RNNGRRESLA KRQEHDSPSM ELKRELRMSK ERELSYEAAL
901: GEKEQREAEL ERILEETKQR EAYLENELAN MWVLVSKLRR SQGADSEISD SISETRQTEQ TEGSF

Arabidopsis Description

P-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4J8L2]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.