Factsheet for VIT_11s0016g00460.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 4
plastid 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400035325	Potato	plastid	73.49	72.41
Solyc07g042560.2.1	Tomato	plastid	73.06	71.77
KRH19384	Soybean	cytosol	70.31	69.79
Bra019444.1-P	Field mustard	cytosol, plastid	67.23	69.59
CDY30956	Canola	cytosol, plastid	67.13	69.48
CDY44836	Canola	cytosol	66.81	69.31
AT3G43210.5	Thale cress	cytosol	68.5	68.87
VIT_17s0000g03290.t01	Wine grape	cytosol, plastid	67.02	65.7
KRH02555	Soybean	cytosol	23.01	63.82
VIT_16s0050g02080.t01	Wine grape	cytosol, mitochondrion	10.6	43.86
VIT_03s0038g00700.t01	Wine grape	nucleus	42.21	41.07
VIT_04s0023g03060.t01	Wine grape	cytosol	40.93	39.67
VIT_18s0001g13580.t01	Wine grape	cytosol	39.34	38.17
VIT_18s0001g08700.t01	Wine grape	cytosol	18.98	21.31
VIT_08s0007g06820.t01	Wine grape	plastid	20.78	19.64
VIT_18s0001g02380.t01	Wine grape	plastid	22.27	18.55
VIT_03s0038g00350.t01	Wine grape	plastid	21.1	18.07
VIT_08s0007g03090.t01	Wine grape	nucleus	18.35	17.15
VIT_06s0004g03810.t01	Wine grape	plastid	18.77	16.86
VIT_18s0001g10090.t01	Wine grape	cytosol	18.98	16.62
VIT_07s0031g00130.t01	Wine grape	cytosol	18.45	16.13
VIT_08s0007g05340.t01	Wine grape	cytosol	20.68	15.6
VIT_08s0040g02590.t01	Wine grape	plastid	16.97	15.25
VIT_05s0029g00400.t01	Wine grape	cytosol, plastid	19.09	13.43
VIT_18s0001g07550.t01	Wine grape	cytosol	16.86	13.32
VIT_19s0090g01600.t01	Wine grape	cytosol, plastid	16.22	12.78
VIT_06s0009g00820.t01	Wine grape	cytosol	18.24	11.82
VIT_05s0020g00620.t01	Wine grape	cytosol	17.5	8.49
VIT_03s0063g01120.t01	Wine grape	cytosol	21.53	7.56

Protein Annotations

EntrezGene:100254378	wikigene:100254378	MapMan:13.4.4.1.1	MapMan:20.1.3.6	Gene3D:3.40.850.10	ProteinID:CCB51366
ProteinID:CCB51366.1	ncoils:Coil	UniProt:F6HGZ8	EMBL:FN595756	GO:GO:0000003	GO:GO:0000166
GO:GO:0000911	GO:GO:0003674	GO:GO:0003774	GO:GO:0003777	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005856
GO:GO:0005871	GO:GO:0005874	GO:GO:0007018	GO:GO:0007049	GO:GO:0007112	GO:GO:0007275
GO:GO:0008017	GO:GO:0008150	GO:GO:0009506	GO:GO:0009555	GO:GO:0009558	GO:GO:0009653
GO:GO:0009987	GO:GO:0010245	GO:GO:0016043	GO:GO:0016787	GO:GO:0016887	GO:GO:0048229
InterPro:IPR001752	InterPro:IPR036961	InterPro:Kinesin-like_fam	InterPro:Kinesin_motor_CS	InterPro:Kinesin_motor_dom	InterPro:Kinesin_motor_dom_sf
EntrezGene:LOC100254378	wikigene:LOC100254378	InterPro:NACK_C	InterPro:P-loop_NTPase	PFAM:PF00225	PFAM:PF11995
PRINTS:PR00380	ScanProsite:PS00411	PFscan:PS50067	PANTHER:PTHR24115	PANTHER:PTHR24115:SF522	SMART:SM00129
SUPFAM:SSF52540	UniParc:UPI0001984240	ArrayExpress:VIT_11s0016g00460	EnsemblPlantsGene:VIT_11s0016g00460	EnsemblPlants:VIT_11s0016g00460.t01	RefSeq:XP_002275046
RefSeq:XP_002275046.1	:	:	:	:	:

Description

Kinesin-like protein [Source:UniProtKB/TrEMBL;Acc:F6HGZ8]

Coordinates

chr11:-:448473..458648

Molecular Weight (calculated)

106628.0 Da

IEP (calculated)

8.723

GRAVY (calculated)

-0.502

Length

943 amino acids

Sequence
(BLAST)

001: MMVGTPATPF SKIQRTPLST PGGPKVCEEK IRVTVRVRPL NRKEQAMYDL IAWDCTDENT IVFKNPNHER PTAPYTFDKV FGPTCSNLMV YEEGAKDVAL
101: SVLTGINATI FAYGQTSSGK TFTMRGITDN AVKDIYEHIK NTTERDIVLK LSALEIYNET VVDLLNRESG SLRLLDDPEK GTIVEKLVEE VVKDSQHLRH
201: LICICEAQRQ VGETALNDKS SRSHQIIRLT IESSLRDNSG CVKSFIASLN LVDLAGSERA SQTNADGTRL KEGSHINRSL LTLTTVIRKL SGGKRIDHIP
301: YRDSKLTRIL RPSLGGNART AIICTVSPGL SHVEQSRNTL SFATSAKEVT NTAQINMVVP DKKLVKHLQK EVARLEAELR SPEPSSSACI RTLLMEKDLK
401: IQQMEKDMKE LKRQRDYAQS QLEVERKSRK EHEGSHQVVK CLSFPDENES FSGRPTPKTR RKVAVGRPAM VRQSATSTDP SMLVHEIRKL ELQQRQLGEE
501: ANRALEVLHK EVVSHRLGSQ DAVVSIAKML SEIKDMQVVR SIPEDIMLQD KANLKEEITR LNSQGSTIES LERKLENVQK SIDKLVFSFP STEKTPEPKA
601: QSKKKKVHPF ALSNNGTMPN LIRSPCSPMS SRKVMECEVE NRAPEHNNIV SGGGDALPGL YKATSPRSDQ SGNCISREGT PVSQRSNSVN VKKMQRMFKN
701: AAEENIQSIR AYVTELKERV AKLQYQKQLL VCQVLELETN EPATEETDMI DHSPVSWHLM FESQRKQIIM LWYLCHVSII HRTQFFLLFK GDPADQIYME
801: VELRRLTWLE QHLAELGNAS PALLGDEPAS FVSSSIKALK QEREYLAKRV SSKLTEEERE MLYIKWEIPA VGKQRRLQLV NKLWTDPHNM EHIKESAEIV
901: AKLVGFCESG EHVSKEMFEL NFVSHSDRKP WMGWNLISNL LHL

Best Arabidopsis Sequence Match ( AT3G43210.1 )
(BLAST)

001: MMGPPRTPLS KIDKSNPYTP CGSKVTEEKI LVTVRMRPLN WREHAKYDLI AWECPDDETI VFKNPNPDKA PTKYSFDKVF EPTCATQEVY EGGSRDVALS
101: ALAGTNATIF AYGQTSSGKT FTMRGVTESV VKDIYEHIRK TQERSFVLKV SALEIYNETV VDLLNRDTGP LRLLDDPEKG TIVENLVEEV VESRQHLQHL
201: ISICEDQRQV GETALNDKSS RSHQIIRLTI HSSLREIAGC VQSFMATLNL VDLAGSERAF QTNADGLRLK EGSHINRSLL TLTTVIRKLS SGRKRDHVPY
301: RDSKLTRILQ NSLGGNARTA IICTISPALS HVEQTKKTLS FAMSAKEVTN CAKVNMVVSE KKLLKHLQQK VAKLESELRS PEPSSSTCLK SLLIEKEMKI
401: QQMESEMKEL KRQRDIAQSE LDLERKAKER KGSSECEPFS QVARCLSYHT KEESIPSKSV PSSRRTARDR RKDNVRQSLT SADPTALVQE IRLLEKHQKK
501: LGEEANQALD LIHKEVTSHK LGDQQAAEKV AKMLSEIRDM QKSNLLTEEI VVGDKANLKE EINRLNSQEI AALEKKLECV QNTIDMLVSS FQTDEQTPDF
601: RTQVKKKRLL PFGLSNSPNL QHMIRGPCSP LSGTENKDPE SNVVSANSAP VSFGATPPKR DDNRCRTQSR EGTPVSRQAN SVDIKRMNRM YKNAAEENIR
701: NIKSYVTGLK ERVAKLQYQK QLLVCQVLEL EANETGAASE YDATDESQMD WPLCFEEQRK QIIMLWHLCH ISIIHRTQFY MLFKGDPADQ IYMEVELRRL
801: TWLEQHLAEL GNASPALLGD EPASYVASSI RALKQEREYL AKRVNTKLGA EEREMLYLKW DVPPVGKQRR QQFINKLWTD PHNMQHVRES AEIVAKLVGF
901: CDSGETIRKE MFELNFASPS DKKTWMMGWN FISNLLHL

Arabidopsis Description

KIN7BKinesin-like protein KIN-7B [Source:UniProtKB/Swiss-Prot;Acc:Q8LNZ2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.