Factsheet for VIT_18s0001g08700.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400012577	Potato	cytosol	68.21	69.2
Solyc04g077540.2.1	Tomato	cytosol	67.62	68.6
KRG88751	Soybean	cytosol	65.24	66.5
KRH05550	Soybean	cytosol	64.17	65.49
AT1G59540.1	Thale cress	cytosol	60.83	62.09
Bra027851.1-P	Field mustard	cytosol	60.71	61.74
CDY67829	Canola	cytosol	60.71	61.74
CDY67820	Canola	cytosol	60.6	61.62
TraesCS1A01G230600.1	Wheat	cytosol	45.36	59.62
KXG28623	Sorghum	cytosol	44.88	59.28
GSMUA_Achr7P27470_001	Banana	cytosol	48.81	59.25
TraesCS4D01G158800.1	Wheat	cytosol	44.4	58.37
HORVU1Hr1G053090.5	Barley	cytosol	43.93	57.75
Zm00001d052615_P001	Maize	cytosol	44.17	55.54
CDY45884	Canola	cytosol, plastid	41.79	53.42
CDY27279	Canola	cytosol	49.52	50.98
Os11t0552600-01	Rice	cytosol, extracellular	22.14	50.54
VIT_16s0050g02080.t01	Wine grape	cytosol, mitochondrion	7.86	28.95
VIT_08s0007g05340.t01	Wine grape	cytosol	41.43	27.84
VIT_08s0007g06820.t01	Wine grape	plastid	23.57	19.84
VIT_17s0000g03290.t01	Wine grape	cytosol, plastid	21.79	19.02
VIT_03s0038g00700.t01	Wine grape	nucleus	21.9	18.99
VIT_11s0016g00460.t01	Wine grape	cytosol	21.31	18.98
VIT_03s0038g00350.t01	Wine grape	plastid	24.4	18.62
VIT_04s0023g03060.t01	Wine grape	cytosol	21.43	18.5
VIT_18s0001g13580.t01	Wine grape	cytosol	21.19	18.31
VIT_08s0007g03090.t01	Wine grape	nucleus	21.43	17.84
VIT_06s0004g03810.t01	Wine grape	plastid	21.79	17.43
VIT_18s0001g02380.t01	Wine grape	plastid	23.33	17.31
VIT_08s0040g02590.t01	Wine grape	plastid	20.6	16.49
VIT_18s0001g10090.t01	Wine grape	cytosol	20.48	15.97
VIT_07s0031g00130.t01	Wine grape	cytosol	20.48	15.94
VIT_05s0029g00400.t01	Wine grape	cytosol, plastid	22.5	14.1
VIT_19s0090g01600.t01	Wine grape	cytosol, plastid	19.88	13.95
VIT_18s0001g07550.t01	Wine grape	cytosol	18.69	13.15
VIT_06s0009g00820.t01	Wine grape	cytosol	21.79	12.58
VIT_05s0020g00620.t01	Wine grape	cytosol	19.29	8.33
VIT_03s0063g01120.t01	Wine grape	cytosol	25.95	8.12

Protein Annotations

EntrezGene:100254027	wikigene:100254027	MapMan:20.1.3.6	Gene3D:3.40.850.10	ProteinID:CBI19369	ProteinID:CBI19369.3
ncoils:Coil	UniProt:E0CNZ1	EMBL:FN595227	GO:GO:0000166	GO:GO:0003674	GO:GO:0003774
GO:GO:0003777	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005856	GO:GO:0005871	GO:GO:0005874	GO:GO:0007018
GO:GO:0008017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016787	GO:GO:0016887	InterPro:IPR001752
InterPro:IPR036961	InterPro:Kinesin-like_fam	InterPro:Kinesin_motor_CS	InterPro:Kinesin_motor_dom	InterPro:Kinesin_motor_dom_sf	EntrezGene:LOC100254027
wikigene:LOC100254027	InterPro:P-loop_NTPase	PFAM:PF00225	PRINTS:PR00380	ScanProsite:PS00411	PFscan:PS50067
PANTHER:PTHR24115	PANTHER:PTHR24115:SF490	SMART:SM00129	SUPFAM:SSF52540	UniParc:UPI0001BE17BA	ArrayExpress:VIT_18s0001g08700
EnsemblPlantsGene:VIT_18s0001g08700	EnsemblPlants:VIT_18s0001g08700.t01	RefSeq:XP_002283486	RefSeq:XP_002283486.2	SEG:seg	:

Description

Kinesin-like protein [Source:UniProtKB/TrEMBL;Acc:E0CNZ1]

Coordinates

chr18:-:7156842..7166217

Molecular Weight (calculated)

94960.6 Da

IEP (calculated)

6.549

GRAVY (calculated)

-0.564

Length

840 amino acids

Sequence
(BLAST)

001: MEKICVAVRV RPPVAQETSS STYWRVEDNR ISLHKTLGTP ISGVSHAFDH VFDQSCANAR VYELLIKDII HAAVEGFNGT AFAYGQTSSG KTYTMNGSES
101: DPGIIHLAVK DVFRRIQMTA DREFLIRVSY MEIYNEEIND LLAVENQKLQ IHESLENGVF VAGLREEIVN GAEQVLKIIE SGEVNRHFGE TNMNARSSRS
201: HTIFRMVIES KEKDSNYSSD YSSTDAVRVS VLNLVDLAGS ERIAKTGAGG VRLKEGKHIN KSLMVLGNVI NKLSDGAKQR GHIPYRDSKL TRILQPALGG
301: NAKTSIICTV APEEVHIEET KGTLQFASRA KRITNCAQVN EILTDAALLK RQKLEIEELR KKLQGSHAEV LEQEILKLRN DMLKYELEHE KLATELEEER
401: KSHKERDQWI REQQMKIDNL SSLVTLSDCD RKSSQEESID SHSTGHGDGF STPCFKAVPN AFVVKRSNYS RLPDYSPLPD AISNVADEDT WLKMNKGYVA
501: DLDSLQITPA RRVQSFPTSE ATPGCSKENY KQEVQVLKRQ LELAIEEKDQ LERNHMEQIL LNKQLTGEIS ELQREAQLIR EIPHRLCESV ANCKEIYKDV
601: MSIMQSFVPD DESSTSKLLS STSEIGTTLL STLENHFSVS IDGNRTFPGN NSLIQEQCKV LCERLNKTIT SLVLSEPSTV KPRHSRNLPC SCGYKGCALG
701: GETACWKEKL DNELNTINEK YQSLEKELEH SNQLLEVSKE RYHSLEREFH LLKDERDSLL QTVSKSTQKL ALVTDQKENV SKELNTELQR RKDLEEEVKQ
801: FSVAFAHRQR SLMSFHSQFK SKIENLRGQN PVPIAKSLGY

Best Arabidopsis Sequence Match ( AT1G59540.1 )
(BLAST)

001: MEKICVAVRV RPPAPENGAS LWKVEDNRIS LHKSLDTPIT TASHAFDHVF DESSTNASVY ELLTKDIIHA AVEGFNGTAF AYGQTSSGKT FTMTGSETDP
101: GIIRRSVRDV FERIHMISDR EFLIRVSYME IYNEEINDLL AVENQRLQIH EHLERGVFVA GLKEEIVSDA EQILKLIDSG EVNRHFGETN MNVHSSRSHT
201: IFRMVIESRG KDNSSSDAIR VSVLNLVDLA GSERIAKTGA GGVRLQEGKY INKSLMILGN VINKLSDSTK LRAHIPYRDS KLTRILQPAL GGNAKTCIIC
301: TIAPEEHHIE ESKGTLQFAS RAKRITNCAQ VNEILTDAAL LKRQKLEIEE LRMKLQGSHA EVLEQEILNL SNQMLKYELE CERLKTQLEE EKRKQKEQEN
401: CIKEQQMKIE NLNNFVTNSD FKRNQSEDFI ISRKTPDGLC NVNDTSDVPG TPCFKSASRS FVVARSNNYS GLSDFSPMVH SLGDVADEDT WMKLNKGFVA
501: DLDQIQFTPA VKCQPTPLSI ATTECPRENH SEVEDLKSRI QLLTNENDSL QVKFNEQVLL SNNLMQEMSE LKQETLTVKE IPNRLSESVA NCKDVYKDVI
601: VTMKSLITDK ESPTANLLLG TTEITTSLLA TLETQFSMIM DGQKTGSSID HPLSDHWETL RVNLKNTTTL LLSDAQAKDE FLNSHNKGQE TAALEEKKLK
701: SELIIIKERY NELEKELCLD KQLLEASRES HEKLIKEVQF LKEERDSLDR KISQSTQRLR VIASDKENAL KDLNVEVKRR KDMEEEIKHI SIAFATRHKS
801: FVSFHSEIKS KMQKLTTQNS KAP

Arabidopsis Description

KIN7NKinesin-like protein KIN-7N [Source:UniProtKB/Swiss-Prot;Acc:Q9S7P3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.