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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY67820 Canola cytosol 69.85 69.01
CDY67829 Canola cytosol 69.49 68.64
AT1G59540.1 Thale cress cytosol 68.5 67.92
CDY45884 Canola cytosol, plastid 53.55 66.51
VIT_18s0001g08700.t01 Wine grape cytosol 50.98 49.52
PGSC0003DMT400012577 Potato cytosol 48.28 47.58
TraesCS1A01G230600.1 Wheat cytosol 37.25 47.57
KXG28623 Sorghum cytosol 37.01 47.48
TraesCS4D01G158800.1 Wheat cytosol 36.89 47.1
Solyc04g077540.2.1 Tomato cytosol 47.79 47.1
HORVU1Hr1G053090.5 Barley cytosol 36.27 46.32
GSMUA_Achr7P27470_001 Banana cytosol 38.6 45.52
KRG88751 Soybean cytosol 45.59 45.15
KRH05550 Soybean cytosol 44.73 44.35
Zm00001d052615_P001 Maize cytosol 36.27 44.31
Os11t0552600-01 Rice cytosol, extracellular 18.5 41.03
CDX75327 Canola nucleus 10.91 32.96
CDX85120 Canola cytosol, plastid 12.62 24.94
CDY03483 Canola cytosol 5.27 24.29
CDX68941 Canola cytosol 13.73 23.43
CDX74009 Canola cytosol 34.07 22.17
CDY07951 Canola cytosol 34.31 21.79
CDX77491 Canola cytosol, plastid 9.68 21.64
CDY47900 Canola cytosol 16.42 19.39
CDY22404 Canola nucleus 17.4 18.49
CDX99601 Canola nucleus 17.89 17.85
CDY41952 Canola nucleus 17.52 17.59
CDY15900 Canola nucleus 18.01 17.42
CDY34261 Canola cytosol 18.01 17.36
CDY42594 Canola nucleus 17.4 17.27
CDY13822 Canola nucleus 18.14 17.17
CDX82016 Canola nucleus 18.01 17.05
CDY08179 Canola plastid 18.38 16.7
CDY04671 Canola plastid 18.26 16.59
CDY14073 Canola plastid 19.61 16.38
CDY04998 Canola plastid 19.49 16.31
CDX90305 Canola plastid 20.59 16.26
CDY08463 Canola cytosol, plastid 19.36 16.26
CDX72718 Canola plastid 20.22 16.22
CDY12116 Canola plastid 20.47 16.17
CDY01095 Canola cytosol, plastid 19.24 16.15
CDY30956 Canola cytosol, plastid 18.01 16.14
CDY21709 Canola plastid 18.75 16.12
CDY19208 Canola cytosol 19.24 16.12
CDY44836 Canola cytosol 17.89 16.06
CDX81870 Canola plastid 18.75 16.05
CDY26167 Canola cytosol, plastid 19.12 15.92
CDY22394 Canola plastid 20.1 15.81
CDX73746 Canola cytosol 18.38 15.5
CDX82022 Canola plastid 20.22 15.41
CDY03482 Canola cytosol 18.01 15.39
CDY30779 Canola cytosol 18.38 15.17
CDX77978 Canola cytosol 18.26 15.1
CDY45220 Canola cytosol 18.38 14.78
CDX77192 Canola cytosol, plastid 18.87 14.72
CDY31717 Canola cytosol, plastid 18.87 14.71
CDY23691 Canola cytosol, plastid 19.12 14.69
CDX82979 Canola cytosol, plastid 19.12 14.69
CDX75064 Canola cytosol 18.14 14.67
CDY19973 Canola cytosol 18.38 14.49
CDY45912 Canola cytosol 18.26 14.48
CDX85308 Canola cytosol 18.26 14.48
CDX90660 Canola cytosol 18.14 14.45
CDY29004 Canola cytosol 17.89 14.44
CDY63235 Canola cytosol 18.38 14.44
CDY35769 Canola cytosol 18.26 14.41
CDX86343 Canola cytosol 18.14 14.38
CDX84151 Canola cytosol 17.89 14.37
CDY17754 Canola cytosol 17.16 13.61
CDY30599 Canola cytosol 17.03 13.55
CDX93381 Canola cytosol, plastid 18.26 13.53
CDY18447 Canola cytosol, plastid 18.14 13.18
CDX87944 Canola cytosol 19.73 12.74
CDY55295 Canola cytosol 19.73 12.69
CDY56229 Canola cytosol, plastid 20.1 12.47
CDY18100 Canola cytosol, plastid 19.98 12.47
CDY42843 Canola cytosol 18.87 12.14
CDY47004 Canola cytosol 18.5 11.97
CDX72728 Canola cytosol 10.54 11.67
CDY58692 Canola nucleus 18.26 11.63
CDY02183 Canola nucleus 18.26 11.54
CDY43743 Canola nucleus 13.24 11.4
CDY36055 Canola plastid 14.71 11.31
CDX82261 Canola plastid 14.95 9.99
CDY71066 Canola cytosol, mitochondrion 8.09 8.92
CDY70999 Canola cytosol, mitochondrion 8.09 8.89
CDY12957 Canola cytosol 8.7 8.6
CDX92129 Canola cytosol 18.5 7.9
CDX95855 Canola cytosol 19.36 7.81
CDX75326 Canola cytosol 3.31 7.42
CDX92299 Canola cytosol 20.71 6.2
CDX99277 Canola cytosol 20.47 6.17
CDY02395 Canola nucleus 2.21 2.68
Protein Annotations
MapMan:20.1.3.6Gene3D:3.40.850.10GO:A0A078GPX6UniProt:A0A078GPX6EnsemblPlants:CDY27279ProteinID:CDY27279
ProteinID:CDY27279.1ncoils:CoilGO:GO:0000166GO:GO:0003674GO:GO:0003774GO:GO:0003777
GO:GO:0003824GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0007018GO:GO:0008017
GO:GO:0008150GO:GO:0009987GO:GO:0016787EnsemblPlantsGene:GSBRNA2T00037177001InterPro:IPR001752InterPro:IPR036961
InterPro:Kinesin-like_famInterPro:Kinesin_motor_domInterPro:Kinesin_motor_dom_sfInterPro:P-loop_NTPasePFAM:PF00225PRINTS:PR00380
PFscan:PS50067PANTHER:PTHR24115PANTHER:PTHR24115:SF490SMART:SM00129SUPFAM:SSF52540UniParc:UPI0004EE2E51
SEG:seg:::::
Description
BnaC04g18590DBnaC04g18590D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GPX6]
Coordinates
chrLK032202:+:158673..163007
Molecular Weight (calculated)
92563.9 Da
IEP (calculated)
5.119
GRAVY (calculated)
-0.387
Length
816 amino acids
Sequence
(BLAST)
001: MEKICVEVRV RPESSSENAS SLWKVEDNRI SLDTPISVTS SYYFDHVFDE MSTNACVYEL LTMDTIHAVV EGFNGKTFTM TGSETDPGII RRSVRDISDR
101: EFLIRVSYME IYNEEINDLL AVENQRLQIH EHLKRRVFVA GLSEEIVNDA EQILKLLDSG EAFKTKTNMN VHSSTSHTIF RMVIESRGKG NNSMDPIRVL
201: VLNLVDLAGS ERIAKTGAGG VRLTEGKYIN KSLMILGNFI NKLSENAKLK GHIPYRDSKL TRILQPALGG NAKTCIICTI APEEYHIEES KGTLQFANRA
301: KRITNCAQVN EILTDDALLK RQKLEIEELR MKLQGSHAEV LEQEIMRLSN QMLKYELECE RLKTQLEEER RKQKEQEQEQ WIKDQQLKTE NINSLVSNLD
401: FKRNQSEEFI SFRKKLDESN NVNDSSDVPG TPCFKSATRS FVVARSNYSG LPDFSPMVDA LGDLADEDTW AKLNKGFVPD LDKLQFTPAF RSQPIPLNTA
501: TMECSREEAL QVKFNEQVVM NNKLMENISE LKQEMLHMKK IPERLYEPVA NCKDVCKDVI VTMKSLVAEK ESPRAKLFFG ATEITTSLLS TLESQFSMIM
601: DGQKSGSGDH PSSDQWETLC VNLKNITTSL LSDAQAIDRN FLTATASQQG SFLVPIIKIR NSCTCVVNSF ATILFSLEQE MAALDEKLKC ELSIIKERYN
701: DVVMDDTKES ELVAADGELD LEEALHVPAG PMTRAKTKRL REAFICLIQK MDQKIIKIDR KIIYEGQIQD GNIWICISAK EITHGDWAFN VTRVELTTAK
801: NQDETLVDRW ILGEKA
Best Arabidopsis Sequence Match ( AT1G59540.1 )
(BLAST)
001: MEKICVAVRV RPPAPENGAS LWKVEDNRIS LHKSLDTPIT TASHAFDHVF DESSTNASVY ELLTKDIIHA AVEGFNGTAF AYGQTSSGKT FTMTGSETDP
101: GIIRRSVRDV FERIHMISDR EFLIRVSYME IYNEEINDLL AVENQRLQIH EHLERGVFVA GLKEEIVSDA EQILKLIDSG EVNRHFGETN MNVHSSRSHT
201: IFRMVIESRG KDNSSSDAIR VSVLNLVDLA GSERIAKTGA GGVRLQEGKY INKSLMILGN VINKLSDSTK LRAHIPYRDS KLTRILQPAL GGNAKTCIIC
301: TIAPEEHHIE ESKGTLQFAS RAKRITNCAQ VNEILTDAAL LKRQKLEIEE LRMKLQGSHA EVLEQEILNL SNQMLKYELE CERLKTQLEE EKRKQKEQEN
401: CIKEQQMKIE NLNNFVTNSD FKRNQSEDFI ISRKTPDGLC NVNDTSDVPG TPCFKSASRS FVVARSNNYS GLSDFSPMVH SLGDVADEDT WMKLNKGFVA
501: DLDQIQFTPA VKCQPTPLSI ATTECPRENH SEVEDLKSRI QLLTNENDSL QVKFNEQVLL SNNLMQEMSE LKQETLTVKE IPNRLSESVA NCKDVYKDVI
601: VTMKSLITDK ESPTANLLLG TTEITTSLLA TLETQFSMIM DGQKTGSSID HPLSDHWETL RVNLKNTTTL LLSDAQAKDE FLNSHNKGQE TAALEEKKLK
701: SELIIIKERY NELEKELCLD KQLLEASRES HEKLIKEVQF LKEERDSLDR KISQSTQRLR VIASDKENAL KDLNVEVKRR KDMEEEIKHI SIAFATRHKS
801: FVSFHSEIKS KMQKLTTQNS KAP
Arabidopsis Description
KIN7NKinesin-like protein KIN-7N [Source:UniProtKB/Swiss-Prot;Acc:Q9S7P3]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.