Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra011415.1-P | Field mustard | nucleus | 96.43 | 52.54 |
| CDX68941 | Canola | cytosol | 54.95 | 41.84 |
| CDX85308 | Canola | cytosol | 26.37 | 9.33 |
| CDX86343 | Canola | cytosol | 26.1 | 9.23 |
| CDY45912 | Canola | cytosol | 25.82 | 9.14 |
| CDY58692 | Canola | nucleus | 32.14 | 9.13 |
| CDY35769 | Canola | cytosol | 25.82 | 9.09 |
| CDY19973 | Canola | cytosol | 25.82 | 9.08 |
| CDY02183 | Canola | nucleus | 32.14 | 9.06 |
| CDY63235 | Canola | cytosol | 25.82 | 9.05 |
| CDY47004 | Canola | cytosol | 31.32 | 9.03 |
| CDY42843 | Canola | cytosol | 31.04 | 8.9 |
| CDY30599 | Canola | cytosol | 24.18 | 8.58 |
| CDY17754 | Canola | cytosol | 24.18 | 8.55 |
| CDX93381 | Canola | cytosol, plastid | 13.46 | 4.45 |
| CDY18447 | Canola | cytosol, plastid | 13.19 | 4.27 |
| CDY01095 | Canola | cytosol, plastid | 11.26 | 4.22 |
| CDY04998 | Canola | plastid | 11.26 | 4.21 |
| CDY08463 | Canola | cytosol, plastid | 10.99 | 4.12 |
| CDX77192 | Canola | cytosol, plastid | 11.81 | 4.11 |
| CDY14073 | Canola | plastid | 10.99 | 4.09 |
| CDY71066 | Canola | cytosol, mitochondrion | 8.24 | 4.05 |
| CDY70999 | Canola | cytosol, mitochondrion | 8.24 | 4.04 |
| CDY31717 | Canola | cytosol, plastid | 11.54 | 4.01 |
| CDX90305 | Canola | plastid | 10.99 | 3.87 |
| CDX72728 | Canola | cytosol | 7.69 | 3.8 |
| CDY12116 | Canola | plastid | 10.71 | 3.78 |
| CDX75064 | Canola | cytosol | 10.44 | 3.77 |
| CDY47900 | Canola | cytosol | 7.14 | 3.76 |
| CDY12957 | Canola | cytosol | 8.52 | 3.75 |
| CDX84151 | Canola | cytosol | 10.44 | 3.74 |
| CDX72718 | Canola | plastid | 10.44 | 3.74 |
| CDX82022 | Canola | plastid | 10.99 | 3.73 |
| CDY43743 | Canola | nucleus | 9.62 | 3.7 |
| CDY23691 | Canola | cytosol, plastid | 10.71 | 3.67 |
| CDY22394 | Canola | plastid | 10.44 | 3.66 |
| CDY42594 | Canola | nucleus | 8.24 | 3.65 |
| CDY22404 | Canola | nucleus | 7.69 | 3.65 |
| CDY55295 | Canola | cytosol | 12.64 | 3.62 |
| CDX82979 | Canola | cytosol, plastid | 10.44 | 3.58 |
| CDY41952 | Canola | nucleus | 7.97 | 3.57 |
| CDY08179 | Canola | plastid | 8.79 | 3.56 |
| CDY04671 | Canola | plastid | 8.79 | 3.56 |
| CDX87944 | Canola | cytosol | 12.09 | 3.48 |
| CDY15900 | Canola | nucleus | 7.97 | 3.44 |
| CDX99601 | Canola | nucleus | 7.69 | 3.42 |
| CDY27279 | Canola | cytosol | 7.42 | 3.31 |
| CDY34261 | Canola | cytosol | 7.69 | 3.31 |
| CDY36055 | Canola | plastid | 9.07 | 3.11 |
| CDY29004 | Canola | cytosol | 8.52 | 3.07 |
| CDY18100 | Canola | cytosol, plastid | 10.99 | 3.06 |
| CDX90660 | Canola | cytosol | 8.52 | 3.03 |
| CDY13822 | Canola | nucleus | 7.14 | 3.02 |
| CDX82016 | Canola | nucleus | 7.14 | 3.02 |
| CDY44836 | Canola | cytosol | 7.42 | 2.97 |
| CDY30956 | Canola | cytosol, plastid | 7.42 | 2.96 |
| CDY03482 | Canola | cytosol | 7.69 | 2.93 |
| CDY67820 | Canola | cytosol | 6.59 | 2.91 |
| CDY67829 | Canola | cytosol | 6.59 | 2.91 |
| CDY56229 | Canola | cytosol, plastid | 10.44 | 2.89 |
| CDX82261 | Canola | plastid | 9.62 | 2.87 |
| CDX74009 | Canola | cytosol | 9.62 | 2.79 |
| CDX73746 | Canola | cytosol | 7.42 | 2.79 |
| CDY45220 | Canola | cytosol | 7.69 | 2.76 |
| CDX77978 | Canola | cytosol | 7.42 | 2.74 |
| CDY30779 | Canola | cytosol | 7.42 | 2.73 |
| CDY07951 | Canola | cytosol | 9.62 | 2.72 |
| CDX81870 | Canola | plastid | 6.87 | 2.62 |
| CDY19208 | Canola | cytosol | 6.87 | 2.57 |
| CDY21709 | Canola | plastid | 6.59 | 2.53 |
| CDY26167 | Canola | cytosol, plastid | 6.59 | 2.45 |
| CDY45884 | Canola | cytosol, plastid | 4.4 | 2.44 |
| CDX95855 | Canola | cytosol | 12.91 | 2.32 |
| CDX92129 | Canola | cytosol | 11.26 | 2.15 |
| CDY02395 | Canola | nucleus | 3.85 | 2.08 |
| CDX92299 | Canola | cytosol | 14.56 | 1.94 |
| CDX99277 | Canola | cytosol | 14.29 | 1.92 |
| CDX85120 | Canola | cytosol, plastid | 0.82 | 0.73 |
| CDX75327 | Canola | nucleus | 0.27 | 0.37 |
| CDX77491 | Canola | cytosol, plastid | 0.0 | 0.0 |
| CDY03483 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| Gene3D:3.40.850.10 | MapMan:35.2 | GO:A0A078CDX7 | EnsemblPlants:CDX75326 | ProteinID:CDX75326 | ProteinID:CDX75326.1 |
| InterPro:CRC | ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003774 | GO:GO:0003777 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005524 | GO:GO:0007018 | GO:GO:0008017 |
| GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016787 | EnsemblPlantsGene:GSBRNA2T00121203001 | InterPro:IPR001752 | InterPro:IPR005172 |
| InterPro:IPR036961 | InterPro:Kinesin-like_fam | InterPro:Kinesin_motor_dom | InterPro:Kinesin_motor_dom_sf | InterPro:P-loop_NTPase | PFscan:PS50067 |
| PFscan:PS51634 | PANTHER:PTHR24115 | PANTHER:PTHR24115:SF740 | SMART:SM01114 | SUPFAM:SSF52540 | InterPro:Tesmin/TSO1-like_CXC |
| UniParc:UPI0004EE190D | SEG:seg | : | : | : | : |
Description
BnaA01g03760D
Coordinates
chrLK031804:-:666423..667750
Molecular Weight (calculated)
41047.8 Da
IEP (calculated)
4.565
GRAVY (calculated)
-0.716
Length
364 amino acids
Sequence
(BLAST)
(BLAST)
001: MCDAACVSPA ISDVEETLNT LRYANCARNI KNKAVVQKQK TSAPSFDYDA TFKELTPLKS EAKNKAVVHE HKPYNKSSEP LFDYDAMFKE LTPSKSESLP
101: VYDKPVYDKE DLFQAFSELK IPWTSQAARF DDLFASSSSR SELRKPVYDK PVYDEDVFEA ITELQCDEDV FEAISELQIP STSQPDGVSS SSPSELIKHN
201: TSSLDVSPKK TESEQEDKCQ KKPMEIIDLI DDEAEDQEKP FIDLTTDEEA EVKEKPFIDL TTAECHLELK ELNKRLEEKE AEIRGSDEEK VQLEKEKRAL
301: QREIEGLRQK LASGSSATPS CTCSKRSSCK TLRCQCLVAN YFCVASCGCS SVKCSNRSRD ERVL
101: VYDKPVYDKE DLFQAFSELK IPWTSQAARF DDLFASSSSR SELRKPVYDK PVYDEDVFEA ITELQCDEDV FEAISELQIP STSQPDGVSS SSPSELIKHN
201: TSSLDVSPKK TESEQEDKCQ KKPMEIIDLI DDEAEDQEKP FIDLTTDEEA EVKEKPFIDL TTAECHLELK ELNKRLEEKE AEIRGSDEEK VQLEKEKRAL
301: QREIEGLRQK LASGSSATPS CTCSKRSSCK TLRCQCLVAN YFCVASCGCS SVKCSNRSRD ERVL
001: MDDFTGLLAR DFGLKPQGKS APMASQSNSS AADFNTFASS YSFATAAGKK SDSLPVFDDP GRDGDDLLFK DVFSGPPPPK YGSSSGDSRS PSAPAFDYDA
101: MFKEPKSKSA SSMPVYDKPV YDDEDVFESI PELKIPSTSS QSARFENVFS SISSSPTKHR KQNSSPFDDL MGNNLGKKGA DSDREEKGSS IFDDLIPGFG
201: RTSSPPSKRT TSETTNQSEK APYRTAETSS NVEEDPFVVL EESESTPREP SRTDPLDDIG KPGPDMNSKG KSHLRPPGNI SGSQSPPVES PGSYHSKKVS
301: FEDFLEPHNM STPPPTNSNG SFESSDDVWL TVSEIPLFTQ PTSAPPPTRP PPPRPTRPIK KKVNEPSIPT SAYHSHVPSS GRASVNSPTA SQMDELDDFS
401: IGRNQTAANG YPDPSSGEDS DVFSTAAASA AAMKDAMDKA EAKFRHAKER REKENLKASR SREGDHTENY DSRERELREK QVRLDRERAE REAEMEKAQE
501: REKEEREREQ KRIERERERL VARQAVERAT REARERAATE AHAKVQRAAV GKATDARERA ERAAVQRAHA EARERAAAGA RDKAAKAAAE AREKAEKAAA
601: EAKERANAEA REKETRVRAE RAAVERAAAE ARGRAAAQAK AKQQQENTND LDSFFSSISR PNSAPRQRTN PLDPFQDSWN KGGSFESSRE SLRVPPGQPE
701: NLRKTSSVTN IVDDLSSIFG ASASQSGGFQ DVDGETEERR RARLERHQRT QERAAKALAE KNERDLQVQR EQVEKDVSFL TT
101: MFKEPKSKSA SSMPVYDKPV YDDEDVFESI PELKIPSTSS QSARFENVFS SISSSPTKHR KQNSSPFDDL MGNNLGKKGA DSDREEKGSS IFDDLIPGFG
201: RTSSPPSKRT TSETTNQSEK APYRTAETSS NVEEDPFVVL EESESTPREP SRTDPLDDIG KPGPDMNSKG KSHLRPPGNI SGSQSPPVES PGSYHSKKVS
301: FEDFLEPHNM STPPPTNSNG SFESSDDVWL TVSEIPLFTQ PTSAPPPTRP PPPRPTRPIK KKVNEPSIPT SAYHSHVPSS GRASVNSPTA SQMDELDDFS
401: IGRNQTAANG YPDPSSGEDS DVFSTAAASA AAMKDAMDKA EAKFRHAKER REKENLKASR SREGDHTENY DSRERELREK QVRLDRERAE REAEMEKAQE
501: REKEEREREQ KRIERERERL VARQAVERAT REARERAATE AHAKVQRAAV GKATDARERA ERAAVQRAHA EARERAAAGA RDKAAKAAAE AREKAEKAAA
601: EAKERANAEA REKETRVRAE RAAVERAAAE ARGRAAAQAK AKQQQENTND LDSFFSSISR PNSAPRQRTN PLDPFQDSWN KGGSFESSRE SLRVPPGQPE
701: NLRKTSSVTN IVDDLSSIFG ASASQSGGFQ DVDGETEERR RARLERHQRT QERAAKALAE KNERDLQVQR EQVEKDVSFL TT
Arabidopsis Description
AUXI1Auxilin-related protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SU08]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.