CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 2
plastid 3
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY31717	Canola	cytosol, plastid	98.95	98.85
Bra035686.1-P	Field mustard	plastid	98.85	98.76
AT2G28620.2	Thale cress	cytosol, plastid	91.87	92.23
CDY23691	Canola	cytosol, plastid	69.98	68.93
CDX82979	Canola	cytosol, plastid	69.89	68.83
PGSC0003DMT400040181	Potato	cytosol, plastid	67.97	67.52
Solyc11g072820.1.1	Tomato	cytosol, plastid	67.78	67.4
PGSC0003DMT400078142	Potato	cytosol, plastid	66.25	66.38
Solyc06g075580.2.1	Tomato	cytosol, plastid	66.16	66.28
GSMUA_Achr9P04070_001	Banana	cytosol	63.77	63.46
Os05t0117798-01	Rice	cytosol	63.48	62.88
GSMUA_Achr7P15420_001	Banana	cytosol	63.0	62.46
EES18930	Sorghum	cytosol	62.52	62.17
GSMUA_Achr2P19060_001	Banana	cytosol	60.8	61.99
Zm00001d035526_P010	Maize	cytosol	61.85	61.04
TraesCS1B01G071500.1	Wheat	cytosol	61.57	60.75
TraesCS1D01G055200.1	Wheat	cytosol	61.47	60.66
TraesCS1A01G054400.2	Wheat	cytosol	61.66	60.34
GSMUA_Achr6P33290_001	Banana	cytosol	58.8	59.54
HORVU1Hr1G010810.1	Barley	cytosol	61.47	59.15
TraesCS5B01G156500.1	Wheat	plastid	55.54	54.61
HORVU5Hr1G049180.2	Barley	plastid	55.35	54.42
TraesCS5D01G162500.1	Wheat	cytosol, plastid	55.16	54.33
TraesCS5A01G157200.1	Wheat	plastid	54.59	53.67
EES09071	Sorghum	plastid	55.35	52.78
Zm00001d030230_P003	Maize	plastid	53.63	51.23
OQU78566	Sorghum	cytosol	56.31	50.38
CDX75064	Canola	cytosol	45.22	46.88
CDX84151	Canola	cytosol	45.12	46.46
CDY43743	Canola	nucleus	38.53	42.56
CDX93381	Canola	cytosol, plastid	42.54	40.42
CDY18447	Canola	cytosol, plastid	42.73	39.8
CDX75327	Canola	nucleus	10.13	39.26
CDY03483	Canola	cytosol	5.64	33.33
CDX85120	Canola	cytosol, plastid	12.62	31.96
CDX68941	Canola	cytosol	14.15	30.96
CDX77491	Canola	cytosol, plastid	10.13	29.04
CDY67829	Canola	cytosol	17.5	22.16
CDY47900	Canola	cytosol	14.63	22.14
CDY67820	Canola	cytosol	17.4	22.03
CDY42594	Canola	nucleus	15.97	20.32
CDY22404	Canola	nucleus	14.91	20.31
CDY41952	Canola	nucleus	15.77	20.3
CDX99601	Canola	nucleus	15.77	20.17
CDY15900	Canola	nucleus	16.16	20.02
CDY19973	Canola	cytosol	19.69	19.9
CDX86343	Canola	cytosol	19.5	19.83
CDY35769	Canola	cytosol	19.5	19.73
CDY45912	Canola	cytosol	19.31	19.63
CDY08463	Canola	cytosol, plastid	18.16	19.55
CDY63235	Canola	cytosol	19.41	19.54
CDX85308	Canola	cytosol	19.12	19.44
CDX82016	Canola	nucleus	15.87	19.26
CDY13822	Canola	nucleus	15.87	19.26
CDY01095	Canola	cytosol, plastid	17.88	19.24
CDY04998	Canola	plastid	17.69	18.97
CDY45884	Canola	cytosol, plastid	11.85	18.87
CDY27279	Canola	cytosol	14.72	18.87
CDY17754	Canola	cytosol	18.55	18.85
CDY14073	Canola	plastid	17.59	18.83
CDY30599	Canola	cytosol	18.36	18.71
CDY12116	Canola	plastid	18.45	18.68
CDY34261	Canola	cytosol	15.11	18.65
CDX90305	Canola	plastid	18.26	18.49
CDY04671	Canola	plastid	15.68	18.26
CDX72718	Canola	plastid	17.69	18.19
CDY08179	Canola	plastid	15.58	18.15
CDY21709	Canola	plastid	16.44	18.12
CDX81870	Canola	plastid	16.44	18.05
CDY22394	Canola	plastid	17.88	18.03
CDX73746	Canola	cytosol	16.54	17.87
CDX77978	Canola	cytosol	16.73	17.73
CDY19208	Canola	cytosol	16.35	17.56
CDY26167	Canola	cytosol, plastid	16.35	17.45
CDY30956	Canola	cytosol, plastid	15.11	17.34
CDY44836	Canola	cytosol	15.01	17.27
CDX82022	Canola	plastid	17.4	16.99
CDY30779	Canola	cytosol	16.06	16.99
CDY03482	Canola	cytosol	15.49	16.96
CDY29004	Canola	cytosol	16.25	16.82
CDY45220	Canola	cytosol	16.06	16.55
CDX87944	Canola	cytosol	19.98	16.53
CDX90660	Canola	cytosol	16.16	16.5
CDY42843	Canola	cytosol	19.98	16.47
CDY55295	Canola	cytosol	19.89	16.39
CDY18100	Canola	cytosol, plastid	20.46	16.37
CDY47004	Canola	cytosol	19.69	16.32
CDY56229	Canola	cytosol, plastid	20.17	16.05
CDX74009	Canola	cytosol	19.02	15.87
CDY02183	Canola	nucleus	19.41	15.72
CDY58692	Canola	nucleus	19.22	15.69
CDY07951	Canola	cytosol	19.12	15.56
CDY36055	Canola	plastid	14.91	14.7
CDX72728	Canola	cytosol	9.75	13.84
CDX82261	Canola	plastid	15.58	13.35
CDX75326	Canola	cytosol	4.11	11.81
CDX92129	Canola	cytosol	20.84	11.41
CDX95855	Canola	cytosol	21.89	11.31
CDY71066	Canola	cytosol, mitochondrion	6.88	9.73
CDY70999	Canola	cytosol, mitochondrion	6.88	9.7
CDX99277	Canola	cytosol	23.42	9.06
CDY12957	Canola	cytosol	7.07	8.96
CDX92299	Canola	cytosol	23.33	8.94
CDY02395	Canola	nucleus	2.96	4.61

Protein Annotations

MapMan:20.1.3.4	Gene3D:3.40.850.10	GO:A0A078CKD6	EnsemblPlants:CDX77192	ProteinID:CDX77192	ProteinID:CDX77192.1
ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003774	GO:GO:0003777	GO:GO:0003824
GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0007018	GO:GO:0008017	GO:GO:0008150
GO:GO:0009987	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00127837001	InterPro:IPR001752	InterPro:IPR036961	InterPro:Kinesin-like_fam
InterPro:Kinesin_motor_CS	InterPro:Kinesin_motor_dom	InterPro:Kinesin_motor_dom_sf	InterPro:P-loop_NTPase	PFAM:PF00225	PRINTS:PR00380
ScanProsite:PS00411	PFscan:PS50067	PANTHER:PTHR24115	PANTHER:PTHR24115:SF517	SMART:SM00129	SUPFAM:SSF52540
UniParc:UPI0004EE3944	SEG:seg	:	:	:	:

Description

BnaC04g39870D

Coordinates

chrLK031809:-:1936530..1942007

Molecular Weight (calculated)

116464.0 Da

IEP (calculated)

6.108

GRAVY (calculated)

-0.661

Length

1046 amino acids

Sequence
(BLAST)

0001: MDANNGKRGG GSVKSPCQTP RSTDKSNRDL RSADGNSNSF NKSEKEKGVN IQVIVRCRPF NSEETRLQTP AVLTCNDRKK EVAVAQNIAG KQIDKTFLFD
0101: KVFGPTSQQK DLYHQAVSPI VFEVLDGYNC TIFAYGQTGT GKTYTMEGGA RKKNGEIPSD AGVIPRAVKQ IFDILEAQSA AEYSLKVSFL ELYNEELTDL
0201: LAPEETKFAD DKSKKPLALM EDGKGGVFVR GLEEEIVSTA DEIYKVLEKG SAKRRTAETL LNKQSSRSHS IFSVTIHIKE CTPEGEEIVK SGKLNLVDLA
0301: GSENISRSGA REGRAREAGE INKSLLTLGR VINALVEHSG HIPYRESKLT RLLRDSLGGK TKTCVIATVS PSVHCLEETL STLDYAHRAK HIKNKPEVNQ
0401: KMMKSAIMKD LYGEIERLKQ EVYAAREKNG IYIPKERYTQ EEAEKKAMAE KIEQMEVEGE AKDKQIIELQ ELYNAEQLVT AGLREKLDKT EKKLRETEQA
0501: LLDLEEKHRQ AVATIKEKEY LISNLLKSEK TLVDRAVELQ AELENAASDV SNLFAKIERK DKIEDSNRSL IQEFQSQLLT QLEVLNSSVA GSVTQQEKQL
0601: QDMEKVMASF VSAKTEATET LRGSLAQLKE RYNSGIKSLD DIAVTLDKDS QTTLNDLNSD VTKHSCALED MFKGFTSEAH SLLEGLQSSL HNQEEKLSAF
0701: TQQQRNLHSR SIESAKSVSE VMLDFFKTLD THACKLTKLA EDAQNVNEQK LSAFTKKFEE SIANEEKQML EKVAELLASS HARKKELVQI AVQDIREGSS
0801: SQTGALQQEM SAMQESASSV KVQWNAHMVQ AESHHLDNIS AVEVAKEDMQ KILLKCLEDS RTGTQQWKTA QESLVDLEKR NVGNADSLVR RAKENNEKLR
0901: AQLSSAVSNT LSEADSANRD ILSSIDNSLQ LDKDASADIN STIAPTYGSL KELRTHHDNN VVEIKENTGK CLGREYKVDE ATSSTPRKRQ YNIPTADSIE
1001: ELKTPSFEEL LKAFHDSSKS PKQMQQSNGE AKHVSNGGRP PLTAIN

Best Arabidopsis Sequence Match ( AT2G28620.2 )
(BLAST)

0001: MDSNNSKKGS SVKSPCQTPR STEKSNRDFR VDSNSNSNPV SKNEKEKGVN IQVIVRCRPF NSEETRLQTP AVLTCNDRKK EVAVAQNIAG KQIDKTFLFD
0101: KVFGPTSQQK DLYHQAVSPI VFEVLDGYNC TIFAYGQTGT GKTYTMEGGA RKKNGEIPSD AGVIPRAVKQ IFDILEAQSA AEYSLKVSFL ELYNEELTDL
0201: LAPEETKFAD DKSKKPLALM EDGKGGVFVR GLEEEIVSTA DEIYKVLEKG SAKRRTAETL LNKQSSRSHS IFSVTIHIKE CTPEGEEIVK SGKLNLVDLA
0301: GSENISRSGA REGRAREAGE INKSLLTLGR VINALVEHSG HIPYRESKLT RLLRDSLGGK TKTCVIATVS PSVHCLEETL STLDYAHRAK HIKNKPEVNQ
0401: KMMKSAIMKD LYSEIERLKQ EVYAAREKNG IYIPKERYTQ EEAEKKAMAD KIEQMEVEGE AKDKQIIDLQ ELYNSEQLVT AGLREKLDKT EKKLYETEQA
0501: LLDLEEKHRQ AVATIKEKEY LISNLLKSEK TLVDRAVELQ AELANAASDV SNLFAKIERK DKIEDSNRSL IQDFQSQLLR QLELLNNSVA GSVSQQEKQL
0601: QDMENVMVSF VSAKTKATET LRGSLAQLKE KYNTGIKSLD DIAGNLDKDS QSTLNDLNSE VTKHSCALED MFKGFTSEAY TLLEGLQGSL HNQEEKLSAF
0701: TQQQRDLHSR SMDSAKSVST VMLDFFKTLD THANKLTKLA EDAQNVNEQK LSAFTKKFEE SIANEEKQML EKVAELLASS NARKKELVQI AVQDIRQGSS
0801: SQTGALQQEM SAMQDSASSI KVQWNSHIVQ AESHHLDNIS AVEVAKEDMQ KMHLKCLENS KTGTQQWKTA QESLVDLEKR NVATADSIIR GAIENNEKLR
0901: TQFSSAVSTT LSDVDSSNRE IISSIDNSLQ LDKDASTDVN STIVPCSENL KELRTHHDDN VVEIKQNTGK CLGHEYKVDE ATSSTPRKRE YNIPTVGSIE
1001: ELKTPSFEEL LKAFHDCKSP KQMQNGEAKH VSNGRPPLTA IN

Arabidopsis Description

P-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:TAIR;Acc:AT2G28620]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.