CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 2
plastid 3
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX77491
CDX85120
CDY18100
CDY56229
CDY70999
CDY71066

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G23670.1	CDX77491	AT3G23670.1	15258761
AT3G23670.1	CDX85120	AT3G23670.1	15258761
AT3G23670.1	CDY18100	AT3G23670.1	15258761
AT3G23670.1	CDY56229	AT3G23670.1	15258761
AT3G23670.1	CDY70999	AT3G23670.1	15258761
AT3G23670.1	CDY71066	AT3G23670.1	15258761

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY18100	Canola	cytosol, plastid	95.67	96.25
CDX85120	Canola	cytosol, plastid	28.97	92.25
CDX77491	Canola	cytosol, plastid	25.02	90.14
CDY70999	Canola	cytosol, mitochondrion	48.59	86.12
CDY71066	Canola	cytosol, mitochondrion	47.76	84.86
AT3G23670.1	Thale cress	cytosol	84.49	84.62
GSMUA_Achr7P17300_001	Banana	cytosol	10.04	70.21
VIT_05s0029g00400.t01	Wine grape	cytosol, plastid	62.43	61.27
KRG97368	Soybean	cytosol, plastid	56.05	59.2
KRH31548	Soybean	cytosol, plastid	55.97	59.07
GSMUA_Achr9P01650_001	Banana	cytosol	50.42	59.04
Solyc12g098630.1.1	Tomato	cytosol, plastid	57.19	57.32
PGSC0003DMT400011905	Potato	cytosol, plastid	56.96	57.31
KRH58812	Soybean	plastid	49.89	56.07
KRH42707	Soybean	plastid	49.58	55.02
Solyc09g097860.2.1	Tomato	cytosol	57.11	54.94
TraesCS6A01G389400.1	Wheat	cytosol	23.42	54.32
GSMUA_Achr9P07340_001	Banana	cytosol, plastid	47.91	54.08
KXG25952	Sorghum	cytosol, plastid	43.5	50.35
TraesCS2A01G275700.2	Wheat	cytosol, plastid	42.81	49.56
TraesCS2B01G293400.1	Wheat	cytosol, plastid	42.81	49.56
HORVU6Hr1G090690.2	Barley	cytosol, plastid	23.95	49.45
Zm00001d025149_P001	Maize	cytosol, plastid	42.36	48.9
HORVU2Hr1G067290.2	Barley	cytosol, plastid	42.21	48.34
Os04t0350300-00	Rice	cytosol, plastid	25.63	48.07
TraesCS2D01G274700.1	Wheat	plastid	41.37	47.89
PGSC0003DMT400042877	Potato	nucleus	29.73	46.71
Os02t0489800-00	Rice	cytosol	20.91	45.99
CDX75327	Canola	nucleus	8.52	41.48
CDY36055	Canola	plastid	28.36	35.16
CDX82261	Canola	plastid	29.2	31.45
CDX68941	Canola	cytosol	10.65	29.29
CDY03483	Canola	cytosol	3.8	28.25
CDY67820	Canola	cytosol	14.22	22.64
CDY67829	Canola	cytosol	14.07	22.4
CDX85308	Canola	cytosol	17.03	21.77
CDX87944	Canola	cytosol	20.76	21.6
CDX86343	Canola	cytosol	16.88	21.57
CDY55295	Canola	cytosol	20.68	21.43
CDY35769	Canola	cytosol	16.81	21.37
CDY19973	Canola	cytosol	16.81	21.35
CDY63235	Canola	cytosol	16.81	21.27
CDY45912	Canola	cytosol	16.5	21.09
CDY30599	Canola	cytosol	16.43	21.05
CDY17754	Canola	cytosol	16.43	20.99
CDY47900	Canola	cytosol	11.03	20.98
CDY22404	Canola	nucleus	12.24	20.96
CDX99601	Canola	nucleus	12.85	20.66
CDY41952	Canola	nucleus	12.7	20.54
CDY15900	Canola	nucleus	13.08	20.38
CDX82016	Canola	nucleus	13.31	20.3
CDY13822	Canola	nucleus	13.31	20.3
CDY31717	Canola	cytosol, plastid	16.12	20.25
CDY42594	Canola	nucleus	12.62	20.19
CDX77192	Canola	cytosol, plastid	16.05	20.17
CDY08463	Canola	cytosol, plastid	14.9	20.16
CDY27279	Canola	cytosol	12.47	20.1
CDY01095	Canola	cytosol, plastid	14.83	20.06
CDY23691	Canola	cytosol, plastid	16.2	20.06
CDX82979	Canola	cytosol, plastid	16.05	19.87
CDX75064	Canola	cytosol	15.13	19.72
CDX84151	Canola	cytosol	15.21	19.68
CDY44836	Canola	cytosol	13.46	19.47
CDY14073	Canola	plastid	14.45	19.45
CDY30956	Canola	cytosol, plastid	13.38	19.32
CDY04998	Canola	plastid	14.3	19.28
CDY34261	Canola	cytosol	12.24	19.01
CDY12116	Canola	plastid	14.9	18.97
CDX90305	Canola	plastid	14.83	18.88
CDX72718	Canola	plastid	14.52	18.78
CDY22394	Canola	plastid	14.6	18.51
CDX73746	Canola	cytosol	13.61	18.49
CDY21709	Canola	plastid	13.31	18.44
CDX82022	Canola	plastid	14.9	18.3
CDY19208	Canola	cytosol	13.54	18.28
CDY26167	Canola	cytosol, plastid	13.61	18.27
CDY08179	Canola	plastid	12.47	18.26
CDX81870	Canola	plastid	13.23	18.26
CDY04671	Canola	plastid	12.4	18.15
CDX77978	Canola	cytosol	13.61	18.14
CDY45884	Canola	cytosol, plastid	8.9	17.81
CDX93381	Canola	cytosol, plastid	14.75	17.62
CDY30779	Canola	cytosol	13.23	17.59
CDY29004	Canola	cytosol	13.38	17.41
CDY03482	Canola	cytosol	12.55	17.28
CDY18447	Canola	cytosol, plastid	14.75	17.28
CDY45220	Canola	cytosol	13.31	17.24
CDY43743	Canola	nucleus	12.32	17.11
CDY42843	Canola	cytosol	16.5	17.1
CDY47004	Canola	cytosol	16.35	17.04
CDX90660	Canola	cytosol	13.16	16.89
CDX74009	Canola	cytosol	16.05	16.83
CDY58692	Canola	nucleus	16.35	16.78
CDY02183	Canola	nucleus	16.27	16.58
CDY07951	Canola	cytosol	15.97	16.34
CDX95855	Canola	cytosol	23.12	15.02
CDX92129	Canola	cytosol	20.76	14.29
CDX72728	Canola	cytosol	7.83	13.98
CDX99277	Canola	cytosol	26.08	12.68
CDX92299	Canola	cytosol	26.24	12.65
CDX75326	Canola	cytosol	2.89	10.44
CDY12957	Canola	cytosol	6.24	9.93
CDY02395	Canola	nucleus	2.97	5.8

Protein Annotations

MapMan:20.1.3.10	Gene3D:3.40.850.10	GO:A0A078J077	UniProt:A0A078J077	EnsemblPlants:CDY56229	ProteinID:CDY56229
ProteinID:CDY56229.1	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003774	GO:GO:0003777
GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0007018	GO:GO:0008017
GO:GO:0008150	GO:GO:0009987	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00017992001	InterPro:IPR001752	InterPro:IPR036961
InterPro:Kinesin-like_fam	InterPro:Kinesin_motor_CS	InterPro:Kinesin_motor_dom	InterPro:Kinesin_motor_dom_sf	InterPro:P-loop_NTPase	PFAM:PF00225
PRINTS:PR00380	ScanProsite:PS00411	PFscan:PS50067	PANTHER:PTHR24115	PANTHER:PTHR24115:SF413	SMART:SM00129
SUPFAM:SSF52540	UniParc:UPI0004EEE4B9	SEG:seg	:	:	:

Description

BnaCnng29910DBnaCnng29910D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J077]

Coordinates

chrLK033470:+:14144..20255

Molecular Weight (calculated)

146015.0 Da

IEP (calculated)

5.187

GRAVY (calculated)

-0.629

Length

1315 amino acids

Sequence
(BLAST)

0001: MKHFMMPRNA VVRDIGEPQS PNPSLTKSKS QRKTRSAKEN APPPDPNSLP PDYRSSPAKL KSPLPPRPPS ANPLKRKLIA EAASDNGVAG VSDSGVKVIV
0101: RVKPPSKGEE EEMIVKKISS DALTINDHTF TFDSIADPDS TQDEIFQLVG APLVENCLAG FNSSVFAYGQ TGSGKTYTMW GPANGLLEEH LIGDQRGLTP
0201: RVFELLFARI SEEQVKHAER QLSYQCRCSF LEIYNEQITD LLDPSQKNLM IREDVKSGVY VEYLTEENVK NLKDLSGLLI KGLANRRTGA TSVNAESSRS
0301: HCVFTCVVES HCKSAADGLS NFKTSRINLV DLAGSERQKS TGAAGERLKE AGNINRSLSQ LGNLINILAE ISQTGKQRHI PYRDSRLTFL LQESLGGNAK
0401: LAMVCAVSPS QSCRSETFST LRFAQRAKAI QNKAVVNEVM QDDVNFLREV IRQLREELQR VKNNGNNPAN PNAAYATSWN ARRSMSLLRS FGLSHPKSLA
0501: NGDDDGDTEM EIDEEAVERL CAQIGLQSSP PAEENNPDTS RNSHLQSSDG QSTGKQFPEN TDVNMEDASC QTENHEAVTI NNEPTVEETG ITAAVQTMDH
0601: GSSVLPHLIT NSLGSPISDT DHDNSLGKAE NIPSCQDLVP GALASSIASV ADASDDTEHF SIIPASPCLS IDPASASHVL ITPTESVSPR IRNSRKSLRT
0701: SSMSTASQKY IERANQVTTE IVEPSSAVST EMLNLPSALS TQKSGAFPVP TNQLAASLHR GMKILDSYRQ STAQRRSTFG FSYKALECKP STVLSKADVG
0801: VQTYPEADII AEENPKEVVC IKCKCIAECD VQETSDISNR QSVTVDNSEK SSFQVPKAVE KVLAGSIRRE MALEEYCTKQ ASEISQLNRL VQQYKHEREC
0901: NAIIGQTRED KIVRLEGLMD GVLSKDDFLD EEFASLMHEH KLLKDMYENH PEVLQTRIEL KRAQEELESF KNFYGEMGER EVLLEEIQDL KAHVHCYTDT
1001: SLTSSRKRGS LLKLTYTCDP NPAPPLNAIP ESVEESPEKT LEQERLRWTE AERNWISLAE ELKNELDTNR KLMEKQKREL DTEKRCTEEL TEAMQMAMKG
1101: HARMIEQYAD LEEKHIQLLA RHRRIREGID DVKKAAARAG VKGAESRFIN ALAAEISALK VQREKEAQYF RDENKSLQSQ LRDTAEAVEA AGELLARLKE
1201: AEEGLKIAQK RATDAEYQAS EAYKQIEKLK SKQETGISTL NQQQHIAESH NHIESLQASL HGDDMAKYDE PVEEPSASSG DEQWREEFEP FYKKDAELAK
1301: LAEPSWFSGY DRCNI

Best Arabidopsis Sequence Match ( AT3G23670.1 )
(BLAST)

0001: MKHFMMPRNA ILRDIGESQS PNPSLTKSKS QRKIKSSKEN APPPDLNSLI PDHRSSPAKL KSPLPPRPPS SNPLKRKLIA EATADNGVAI GVSDSGVKVI
0101: VRMKPPSKGE EEEMIVKKIS NDALTINEQT FTFDSIADPE STQDEIFQLV GAPLVENCLA GFNSSVFAYG QTGSGKTYTM WGPANGLLEE HLSGDQRGLT
0201: PRVFELLFAR LSEEQAKHAE RQLKYQCRCS FLEIYNEQIT DLLDPSLKNL MIREDVKSGV YVENLTEEYV KNLKDLSKLL VKGLANRRTG ATSVNAESSR
0301: SHCVFTCVVE SHCKSVADGL SSFKTSRINL VDLAGSERQK LTGAAGDRLK EAGNINRSLS QLGNLINILA EISQTGKQRH IPYRDSRLTF LLQESLGGNA
0401: KLAMVCAVSP SQSCRSETFS TLRFAQRAKA IQNKAIVNEV MQDDVNFLRE VIRQLRDELQ RVKDDKGNNP TNPNAAYTTS WNARRSLSLL RSFGLGHPKS
0501: LPNGDDDGDT EMEIDEEAVE RLCAQMGLSP PAEDNNQEMS RVEKINSSLQ TVVLKDESYN NSHLKSSEAT DVNMEDACCQ TENNGSETDN ALTVAETMDD
0601: GSSVQPDSIT NSLHSCISDT NQGNSPSKAE NIPSCQDLVI EADVSAIVSV ADTSNNTEQV SVNPVSPCLS VAPVSVSPVL IPPTESASPK IRNSRKSLRT
0701: TSMSTASQKD IERANQLTPE VVEPSPAMST EVLNLYSALS TKKSEAFPVP TRQLAASLHR GMKLLDSYRQ STALRRSTFR LSYKALECKP STVLSKADVG
0801: VQTYPQADEI AEDNSKEVLC SRCKCRAECD AQEISDTSNL QLVPIDNSEG SEKSNFQVPK AVEKVLAGSI RREMAMEEFC TKQASEISQL NRLVQQYKHE
0901: RECNAIIGQT REDKIVRLES LMDGVLSKDD FLDEEFASLM HEHKLLKDMY ENHPEVLQTR IELKRVQEEL ESFKNFYGDM GEREVLLEEI HDLKAQLQCY
1001: TDSSLTSARR RGSLLKLTYA CDPNQAPQLN TIPESVDEGP EKTLEQERLR WTEAESNWIS LAEELRTELD TNRLLMEKQK RELDTEKRCA EELTEAMQMA
1101: MQGHARMIEQ YADLEEKHIQ LLARHRRIRE GIDDVKKAAA RAGVKGAESR FINALAAEIS ALKVQREKEV RYFRDENKSL QSQLRDTAEA VQAAGELLVR
1201: FKEAEEGLTF AQKRAMDAEY EASEAYKKVD KLKRKYETEI STVNQQHNAE PQNPIESLQA SCNDDAMAKY DEPSASDGDN QWREEFQPFY KKDEELSKLA
1301: EPSWFSGYDR CNI

Arabidopsis Description

KIN12BKinesin-like protein KIN-12B [Source:UniProtKB/Swiss-Prot;Acc:Q8L7Y8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.