CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 4
cytosol 3
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG97368
KRH31548
KRH42707
KRH58812

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G23670.1	KRG97368	AT3G23670.1	15258761
AT3G23670.1	KRH31548	AT3G23670.1	15258761
AT3G23670.1	KRH42707	AT3G23670.1	15258761
AT3G23670.1	KRH58812	AT3G23670.1	15258761
AT4G14150.1	KRG97368	AT3G23670.1	15258761
AT4G14150.1	KRH31548	AT3G23670.1	15258761
AT4G14150.1	KRH42707	AT3G23670.1	15258761
AT4G14150.1	KRH58812	AT3G23670.1	15258761
AT4G14150.1	KRG97368	AT4G14150.1	15258761
AT4G14150.1	KRH31548	AT4G14150.1	15258761
AT4G14150.1	KRH42707	AT4G14150.1	15258761
AT4G14150.1	KRH58812	AT4G14150.1	15258761

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG97368	Soybean	cytosol, plastid	93.5	93.57
CDX85120	Canola	cytosol, plastid	23.68	71.43
KRH58812	Soybean	plastid	66.77	71.11
KRH42707	Soybean	plastid	65.97	69.37
CDX77491	Canola	cytosol, plastid	19.82	67.67
GSMUA_Achr7P17300_001	Banana	cytosol	10.03	66.49
VIT_05s0029g00400.t01	Wine grape	cytosol, plastid	64.53	60.0
GSMUA_Achr9P01650_001	Banana	cytosol	53.69	59.57
AT4G14150.1	Thale cress	cytosol, plastid	59.55	57.43
AT3G23670.1	Thale cress	cytosol	60.35	57.27
PGSC0003DMT400011905	Potato	cytosol, plastid	59.79	57.0
Solyc12g098630.1.1	Tomato	cytosol, plastid	59.95	56.94
CDY18100	Canola	cytosol, plastid	59.55	56.77
CDY56229	Canola	cytosol, plastid	59.07	55.97
Solyc09g097860.2.1	Tomato	cytosol	61.16	55.74
Bra014969.1-P	Field mustard	cytosol, plastid	59.07	55.26
Bra028334.1-P	Field mustard	plastid	56.9	54.79
TraesCS6A01G389400.1	Wheat	cytosol	24.8	54.5
GSMUA_Achr9P07340_001	Banana	cytosol, plastid	50.8	54.33
KXG25952	Sorghum	cytosol, plastid	46.63	51.14
TraesCS2B01G293400.1	Wheat	cytosol, plastid	46.23	50.7
TraesCS2A01G275700.2	Wheat	cytosol, plastid	46.23	50.7
HORVU6Hr1G090690.2	Barley	cytosol, plastid	25.76	50.39
HORVU2Hr1G067290.2	Barley	cytosol, plastid	45.75	49.65
TraesCS2D01G274700.1	Wheat	plastid	44.78	49.12
Zm00001d025149_P001	Maize	cytosol, plastid	44.78	48.99
Os04t0350300-00	Rice	cytosol, plastid	27.37	48.64
Os02t0489800-00	Rice	cytosol	23.19	48.33
PGSC0003DMT400042877	Potato	nucleus	32.42	48.27
CDY70999	Canola	cytosol, mitochondrion	28.65	48.11
CDY71066	Canola	cytosol, mitochondrion	28.57	48.11
KRH71192	Soybean	cytosol	13.24	37.41
KRH73858	Soybean	plastid	36.28	37.11
KRH14292	Soybean	cytosol, plastid	35.96	36.72
KRG98582	Soybean	plastid	32.66	35.67
KRH46292	Soybean	plastid	32.74	35.66
KRH12754	Soybean	cytosol	3.21	29.41
KRH02555	Soybean	cytosol	7.87	28.82
KRH38089	Soybean	cytosol	8.11	26.3
KRH05550	Soybean	cytosol	15.09	22.84
KRG88751	Soybean	cytosol	14.93	22.57
KRH33183	Soybean	cytosol	7.78	22.3
KRH04551	Soybean	cytosol	18.38	22.23
KRH57809	Soybean	cytosol	18.38	22.21
KRH15399	Soybean	cytosol	17.58	21.28
KRH05644	Soybean	cytosol	17.58	21.26
KRH61333	Soybean	cytosol	17.42	21.13
KRH52032	Soybean	cytosol	17.09	20.82
KRH10347	Soybean	plastid	17.5	20.74
KRH22970	Soybean	cytosol, plastid	17.42	20.65
KRG88692	Soybean	cytosol	17.26	20.5
KRH26741	Soybean	cytosol	22.31	20.46
KRH22593	Soybean	cytosol	22.31	20.46
KRH24979	Soybean	cytosol	17.09	20.44
KRH24371	Soybean	nucleus	14.53	20.34
KRH05116	Soybean	cytosol	18.06	20.27
KRG95428	Soybean	plastid	16.45	20.22
KRH51460	Soybean	cytosol	14.21	20.11
KRH67102	Soybean	plastid	16.29	20.02
KRH29342	Soybean	nucleus	14.37	19.93
KRH32336	Soybean	plastid	16.69	19.89
KRH71812	Soybean	cytosol, plastid	15.73	19.82
KRH19743	Soybean	cytosol, plastid	16.45	19.64
KRH67944	Soybean	cytosol	15.65	19.38
KRH08108	Soybean	nucleus	14.53	19.34
KRH60786	Soybean	plastid	16.53	19.25
KRH69811	Soybean	nucleus	14.61	19.18
KRH29374	Soybean	plastid	16.53	19.16
KRH60764	Soybean	cytosol	13.8	19.13
KRG96202	Soybean	cytosol	15.41	19.09
KRH24392	Soybean	plastid	16.53	18.92
KRH51475	Soybean	plastid	16.05	18.69
KRH48554	Soybean	cytosol	14.29	18.5
KRH28771	Soybean	nucleus	14.13	18.47
KRH39148	Soybean	cytosol, plastid	14.13	18.3
KRH76685	Soybean	nucleus	14.13	18.22
KRH19384	Soybean	cytosol	13.64	17.89
KRH61076	Soybean	cytosol	13.16	17.6
KRH17972	Soybean	plastid	15.89	17.55
KRH38060	Soybean	plastid	8.51	16.93
KRH51754	Soybean	cytosol	13.32	16.73
KRH72462	Soybean	cytosol	17.26	16.58
KRH16847	Soybean	cytosol	17.01	16.41
KRH38250	Soybean	cytosol, plastid	5.38	16.34
KRH62222	Soybean	nucleus	16.61	16.26
KRH02434	Soybean	cytosol	24.88	14.19
KRH50230	Soybean	cytosol, nucleus	27.85	12.43
KRH15784	Soybean	cytosol	12.68	9.18
KRH16381	Soybean	cytosol	4.65	8.75

Protein Annotations

EntrezGene:100785790	MapMan:20.1.3.10	Gene3D:3.40.850.10	EMBL:ACUP02007146	ncoils:Coil	EnsemblPlantsGene:GLYMA_11G253200
GO:GO:0000166	GO:GO:0003674	GO:GO:0003774	GO:GO:0003777	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005856
GO:GO:0005871	GO:GO:0007018	GO:GO:0008017	GO:GO:0008150	GO:GO:0008574	GO:GO:0009987
GO:GO:0016787	UniProt:I1LN45	InterPro:IPR001752	InterPro:IPR036961	EnsemblPlants:KRH31548	ProteinID:KRH31548
ProteinID:KRH31548.1	InterPro:Kinesin-like_fam	InterPro:Kinesin_motor_CS	InterPro:Kinesin_motor_dom	InterPro:Kinesin_motor_dom_sf	InterPro:P-loop_NTPase
PFAM:PF00225	PRINTS:PR00380	ScanProsite:PS00411	PFscan:PS50067	PANTHER:PTHR24115	PANTHER:PTHR24115:SF413
SMART:SM00129	SUPFAM:SSF52540	UniParc:UPI000233D271	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr11:-:34404329..34410760

Molecular Weight (calculated)

139237.0 Da

IEP (calculated)

5.238

GRAVY (calculated)

-0.660

Length

1246 amino acids

Sequence
(BLAST)

0001: MKHFMLPRNP LRDAAELPSS PSPTPTTSSA KPRSSSRKHK PSKENDPPSD PNLVTPSPAK LKSPLPPRPP SSNPLKRKLT AADALTDNSL PAPSDSGVKV
0101: IVRMRPLSPD KDNVDPTVQK VSNDSLSING HNFTFDSVAD MAATQLDIFE HIGVPLVEHC LAGFNSSVFA YGQTGSGKTY TMWGPANCLS EENDQQGLAP
0201: RVFQRLFARI SEEQTKHSGN QLNYQCHCSF LEIYNEQIMD LLDPNQKNLQ IREDVKSGVY VENLTEEDVS SINDVTQLLI KGLSNRRTGA TSINSESSRS
0301: HTVFICVVES RCKSAADGMS RFKTSRINLV DLAGSERQKS TGAAGERLKE AGNINRSLSQ LGNLINILAE VSQTGKQRHI PYRDSRLTFL LQESLGGNAK
0401: LAMICAISPA QSCRSETFST LRFAQRAKAI KNKAVVNEVM EDNVKHLRQV IRQLRDELHR IKANGYNPTE SSGGHSAAWI RQSLNLLQSS LNRPPPLSRL
0501: DEDGDEEMEI DEEGVEDHDG VSCTANMPSN CNIVDNNDNE MNTDDQDLAQ PGVEKNIPSC SGSKGLNEEP SRAMVQNSFS CPIGESDSPS AATNCVSPAG
0601: LSIVQCDLSP ILKSPAPSVS PRISTSRKSL RTSTGLSPSE NDLHVEKDLD MKTITKKSST SALSSQTSPN FLSKTENLAA SIRHGLEIMD SYKRNSALRQ
0701: SPYRFSLQPR ESRLIFPTNK VDVGLQTSLD DIVGEDSVLF TCSNCKNRAH LDANETDNDS NLQLIPVDCL EFADKPKKQV IKAVEKVLAG SIRREMALEE
0801: FCAKQTSEIM QLNRLVQQYK HERECNAIIA QTREDKILRL ESLMDGVLPT EEFMEEELVA LTHEHKILKD KYENHPEVLK MEIELKKVQE ELEKYQNFYK
0901: LGEREVLMEE IQSLRSQLQF YVDSSSTSAR KQYPLLQLTY SSEPSMAATL TVIPESTEER EETNETLASS RNDTEAQFEQ ERIKWTEAES RWISLSEELR
1001: AELESSRLLA EKRKQELDAE RECTQELQEA MHMAIEGHAR LLEQYADLEE KHIHLLARHR QIQDGIEDVK KAASRAGVRG AESKFINALA AEISALKAER
1101: EKERRILRDE NKGLQSQLKD TAEAVQAAGE LLLRLKEAEE AVTTAQKRAM DAEQEAAKAY KQIDKLKNKH EKEIITLNEL LLEARLPKES VRPTYDDDVV
1201: MPSYDDSKEP KSVNDQFEPF TNNAEYGELA KVTESSWFSG YDRCNI

Best Arabidopsis Sequence Match ( AT3G23670.1 )
(BLAST)

0001: MKHFMMPRNA ILRDIGESQS PNPSLTKSKS QRKIKSSKEN APPPDLNSLI PDHRSSPAKL KSPLPPRPPS SNPLKRKLIA EATADNGVAI GVSDSGVKVI
0101: VRMKPPSKGE EEEMIVKKIS NDALTINEQT FTFDSIADPE STQDEIFQLV GAPLVENCLA GFNSSVFAYG QTGSGKTYTM WGPANGLLEE HLSGDQRGLT
0201: PRVFELLFAR LSEEQAKHAE RQLKYQCRCS FLEIYNEQIT DLLDPSLKNL MIREDVKSGV YVENLTEEYV KNLKDLSKLL VKGLANRRTG ATSVNAESSR
0301: SHCVFTCVVE SHCKSVADGL SSFKTSRINL VDLAGSERQK LTGAAGDRLK EAGNINRSLS QLGNLINILA EISQTGKQRH IPYRDSRLTF LLQESLGGNA
0401: KLAMVCAVSP SQSCRSETFS TLRFAQRAKA IQNKAIVNEV MQDDVNFLRE VIRQLRDELQ RVKDDKGNNP TNPNAAYTTS WNARRSLSLL RSFGLGHPKS
0501: LPNGDDDGDT EMEIDEEAVE RLCAQMGLSP PAEDNNQEMS RVEKINSSLQ TVVLKDESYN NSHLKSSEAT DVNMEDACCQ TENNGSETDN ALTVAETMDD
0601: GSSVQPDSIT NSLHSCISDT NQGNSPSKAE NIPSCQDLVI EADVSAIVSV ADTSNNTEQV SVNPVSPCLS VAPVSVSPVL IPPTESASPK IRNSRKSLRT
0701: TSMSTASQKD IERANQLTPE VVEPSPAMST EVLNLYSALS TKKSEAFPVP TRQLAASLHR GMKLLDSYRQ STALRRSTFR LSYKALECKP STVLSKADVG
0801: VQTYPQADEI AEDNSKEVLC SRCKCRAECD AQEISDTSNL QLVPIDNSEG SEKSNFQVPK AVEKVLAGSI RREMAMEEFC TKQASEISQL NRLVQQYKHE
0901: RECNAIIGQT REDKIVRLES LMDGVLSKDD FLDEEFASLM HEHKLLKDMY ENHPEVLQTR IELKRVQEEL ESFKNFYGDM GEREVLLEEI HDLKAQLQCY
1001: TDSSLTSARR RGSLLKLTYA CDPNQAPQLN TIPESVDEGP EKTLEQERLR WTEAESNWIS LAEELRTELD TNRLLMEKQK RELDTEKRCA EELTEAMQMA
1101: MQGHARMIEQ YADLEEKHIQ LLARHRRIRE GIDDVKKAAA RAGVKGAESR FINALAAEIS ALKVQREKEV RYFRDENKSL QSQLRDTAEA VQAAGELLVR
1201: FKEAEEGLTF AQKRAMDAEY EASEAYKKVD KLKRKYETEI STVNQQHNAE PQNPIESLQA SCNDDAMAKY DEPSASDGDN QWREEFQPFY KKDEELSKLA
1301: EPSWFSGYDR CNI

Arabidopsis Description

KIN12BKinesin-like protein KIN-12B [Source:UniProtKB/Swiss-Prot;Acc:Q8L7Y8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.