CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 2
plastid 3
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX77491
CDX85120
CDY18100
CDY56229
CDY70999
CDY71066

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G23670.1	CDX77491	AT3G23670.1	15258761
AT3G23670.1	CDX85120	AT3G23670.1	15258761
AT3G23670.1	CDY18100	AT3G23670.1	15258761
AT3G23670.1	CDY56229	AT3G23670.1	15258761
AT3G23670.1	CDY70999	AT3G23670.1	15258761
AT3G23670.1	CDY71066	AT3G23670.1	15258761

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX77491	Canola	cytosol, plastid	85.47	96.71
GSMUA_Achr7P17300_001	Banana	cytosol	31.96	70.21
TraesCS6A01G389400.1	Wheat	cytosol	56.66	41.27
CDX75327	Canola	nucleus	26.39	40.37
HORVU6Hr1G090690.2	Barley	cytosol, plastid	56.9	36.89
Bra014969.1-P	Field mustard	cytosol, plastid	97.82	30.33
CDY18100	Canola	cytosol, plastid	91.77	29.0
CDY56229	Canola	cytosol, plastid	92.25	28.97
CDY03483	Canola	cytosol	12.11	28.25
AT3G23670.1	Thale cress	cytosol	89.1	28.03
GSMUA_Achr9P01650_001	Banana	cytosol	67.31	24.76
GSMUA_Achr9P07340_001	Banana	cytosol, plastid	66.83	23.69
KRH31548	Soybean	cytosol, plastid	71.43	23.68
KRG97368	Soybean	cytosol, plastid	71.19	23.61
VIT_05s0029g00400.t01	Wine grape	cytosol, plastid	75.79	23.36
PGSC0003DMT400011905	Potato	cytosol, plastid	73.85	23.34
Solyc12g098630.1.1	Tomato	cytosol, plastid	73.85	23.25
CDX68941	Canola	cytosol	26.88	23.22
KXG25952	Sorghum	cytosol, plastid	63.68	23.15
KRH58812	Soybean	plastid	64.65	22.82
KRH42707	Soybean	plastid	64.89	22.62
TraesCS2A01G275700.2	Wheat	cytosol, plastid	61.99	22.54
TraesCS2B01G293400.1	Wheat	cytosol, plastid	61.99	22.54
Zm00001d025149_P001	Maize	cytosol, plastid	60.77	22.04
Solyc09g097860.2.1	Tomato	cytosol	72.88	22.02
HORVU2Hr1G067290.2	Barley	cytosol, plastid	60.05	21.6
TraesCS2D01G274700.1	Wheat	plastid	57.63	20.95
CDY47900	Canola	cytosol	25.91	15.48
CDY36055	Canola	plastid	38.26	14.89
CDY67820	Canola	cytosol	29.3	14.65
CDY67829	Canola	cytosol	29.3	14.65
CDY22404	Canola	nucleus	26.39	14.19
CDX99601	Canola	nucleus	27.12	13.69
CDY34261	Canola	cytosol	27.6	13.46
CDX82016	Canola	nucleus	28.09	13.46
CDY13822	Canola	nucleus	28.09	13.46
CDX87944	Canola	cytosol	41.16	13.45
CDY41952	Canola	nucleus	26.39	13.41
CDY15900	Canola	nucleus	27.36	13.39
CDY55295	Canola	cytosol	40.92	13.32
CDY42594	Canola	nucleus	26.39	13.26
CDX82261	Canola	plastid	38.98	13.19
CDY45884	Canola	cytosol, plastid	20.34	12.79
CDY27279	Canola	cytosol	24.94	12.62
CDX77192	Canola	cytosol, plastid	31.96	12.62
CDY31717	Canola	cytosol, plastid	31.96	12.61
CDY08179	Canola	plastid	27.36	12.58
CDY44836	Canola	cytosol	27.6	12.54
CDY04671	Canola	plastid	27.12	12.47
CDY30956	Canola	cytosol, plastid	27.12	12.29
CDX73746	Canola	cytosol	28.81	12.29
CDX85308	Canola	cytosol	30.27	12.15
CDX86343	Canola	cytosol	30.27	12.15
CDY23691	Canola	cytosol, plastid	31.23	12.15
CDX77978	Canola	cytosol	28.81	12.06
CDX82979	Canola	cytosol, plastid	30.99	12.05
CDY03482	Canola	cytosol	27.84	12.04
CDY63235	Canola	cytosol	30.27	12.03
CDX90305	Canola	plastid	30.02	12.0
CDY12116	Canola	plastid	30.02	12.0
CDX75064	Canola	cytosol	29.3	11.99
CDY19973	Canola	cytosol	30.02	11.98
CDX84151	Canola	cytosol	29.3	11.91
CDY35769	Canola	cytosol	29.78	11.9
CDY30599	Canola	cytosol	29.54	11.89
CDY17754	Canola	cytosol	29.54	11.86
CDY04998	Canola	plastid	27.84	11.79
CDY14073	Canola	plastid	27.6	11.67
CDY45912	Canola	cytosol	29.06	11.66
CDX81870	Canola	plastid	26.88	11.65
CDX72718	Canola	plastid	28.57	11.6
CDY21709	Canola	plastid	26.63	11.59
CDY22394	Canola	plastid	29.06	11.57
CDX93381	Canola	cytosol, plastid	30.75	11.54
CDY26167	Canola	cytosol, plastid	27.36	11.53
CDY30779	Canola	cytosol	27.6	11.53
CDY01095	Canola	cytosol, plastid	27.12	11.52
CDY08463	Canola	cytosol, plastid	27.12	11.52
CDY19208	Canola	cytosol	27.12	11.5
CDY29004	Canola	cytosol	28.09	11.47
CDY18447	Canola	cytosol, plastid	30.75	11.31
CDX82022	Canola	plastid	29.3	11.3
CDY45220	Canola	cytosol	27.6	11.23
CDX90660	Canola	cytosol	27.6	11.13
CDY42843	Canola	cytosol	29.78	9.69
CDY47004	Canola	cytosol	29.3	9.59
CDX92129	Canola	cytosol	44.07	9.52
CDY58692	Canola	nucleus	29.06	9.37
CDX74009	Canola	cytosol	28.33	9.33
CDY02183	Canola	nucleus	28.81	9.22
CDY07951	Canola	cytosol	28.33	9.11
CDY43743	Canola	nucleus	20.58	8.98
CDX95855	Canola	cytosol	43.58	8.89
CDY71066	Canola	cytosol, mitochondrion	13.56	7.57
CDY70999	Canola	cytosol, mitochondrion	13.56	7.55
CDX72728	Canola	cytosol	12.83	7.19
CDX99277	Canola	cytosol	44.79	6.84
CDX92299	Canola	cytosol	44.79	6.78
CDY12957	Canola	cytosol	6.78	3.39
Os04t0350300-00	Rice	cytosol, plastid	1.94	1.14
CDX75326	Canola	cytosol	0.73	0.82
CDY02395	Canola	nucleus	0.0	0.0
Os02t0489800-00	Rice	cytosol	0.0	0.0
PGSC0003DMT400042877	Potato	nucleus	0.0	0.0

Protein Annotations

MapMan:20.1.3.10	Gene3D:3.40.850.10	GO:A0A078D7M3	EnsemblPlants:CDX85120	ProteinID:CDX85120	ProteinID:CDX85120.1
GO:GO:0000166	GO:GO:0003674	GO:GO:0003774	GO:GO:0003777	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0005524	GO:GO:0007018	GO:GO:0008017	GO:GO:0008150	GO:GO:0009987
GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00142642001	InterPro:IPR001752	InterPro:IPR036961	InterPro:Kinesin-like_fam	InterPro:Kinesin_motor_CS
InterPro:Kinesin_motor_dom	InterPro:Kinesin_motor_dom_sf	InterPro:P-loop_NTPase	PFAM:PF00225	PRINTS:PR00380	ScanProsite:PS00411
PFscan:PS50067	PANTHER:PTHR24115	PANTHER:PTHR24115:SF413	SMART:SM00129	SUPFAM:SSF52540	UniParc:UPI0004EE39CE
SEG:seg	:	:	:	:	:

Description

BnaC07g07860D

Coordinates

chrLK031840:+:835093..837507

Molecular Weight (calculated)

45153.8 Da

IEP (calculated)

9.027

GRAVY (calculated)

-0.492

Length

413 amino acids

Sequence
(BLAST)

001: MKHFMMPRNA VLRDVGEPQS PNPSSSKPKS QRKTRSAKEN APPPDLNSFP PDYKSSPAKM KCPLPPRPPS ANPLKRKLSA EAASENGVSG GVSDSGVKVI
101: VRVKPPSKGE EEEMIVKKIS SDSLTLNEHT FTFDSIADPE STQDEIFQLV GAPLVENCLA GFNSSVFAYG QTGSGKTYTM WGPANGLLEE HLSGDQRGLT
201: PRVFELLFAR ISEEQVKHAD RQLSYQCRCS FLEIYNEQIT DLLDPSQKNL MIREDVKLGV YVDNLTKGYV KNLKDLSQLL IKGLANRRTG ATSVNAESSR
301: SHCVFTCIVE SHCKNAADGL SSFKTSRINL VDLAGSEKQK STGAAGERLK EAGNINRSLS QLGNLINILA EISQTGKQRH IPYRDSRLTF LLQESLGGNA
401: KLAMVCAVSP SQR

Best Arabidopsis Sequence Match ( AT3G23670.1 )
(BLAST)

0001: MKHFMMPRNA ILRDIGESQS PNPSLTKSKS QRKIKSSKEN APPPDLNSLI PDHRSSPAKL KSPLPPRPPS SNPLKRKLIA EATADNGVAI GVSDSGVKVI
0101: VRMKPPSKGE EEEMIVKKIS NDALTINEQT FTFDSIADPE STQDEIFQLV GAPLVENCLA GFNSSVFAYG QTGSGKTYTM WGPANGLLEE HLSGDQRGLT
0201: PRVFELLFAR LSEEQAKHAE RQLKYQCRCS FLEIYNEQIT DLLDPSLKNL MIREDVKSGV YVENLTEEYV KNLKDLSKLL VKGLANRRTG ATSVNAESSR
0301: SHCVFTCVVE SHCKSVADGL SSFKTSRINL VDLAGSERQK LTGAAGDRLK EAGNINRSLS QLGNLINILA EISQTGKQRH IPYRDSRLTF LLQESLGGNA
0401: KLAMVCAVSP SQSCRSETFS TLRFAQRAKA IQNKAIVNEV MQDDVNFLRE VIRQLRDELQ RVKDDKGNNP TNPNAAYTTS WNARRSLSLL RSFGLGHPKS
0501: LPNGDDDGDT EMEIDEEAVE RLCAQMGLSP PAEDNNQEMS RVEKINSSLQ TVVLKDESYN NSHLKSSEAT DVNMEDACCQ TENNGSETDN ALTVAETMDD
0601: GSSVQPDSIT NSLHSCISDT NQGNSPSKAE NIPSCQDLVI EADVSAIVSV ADTSNNTEQV SVNPVSPCLS VAPVSVSPVL IPPTESASPK IRNSRKSLRT
0701: TSMSTASQKD IERANQLTPE VVEPSPAMST EVLNLYSALS TKKSEAFPVP TRQLAASLHR GMKLLDSYRQ STALRRSTFR LSYKALECKP STVLSKADVG
0801: VQTYPQADEI AEDNSKEVLC SRCKCRAECD AQEISDTSNL QLVPIDNSEG SEKSNFQVPK AVEKVLAGSI RREMAMEEFC TKQASEISQL NRLVQQYKHE
0901: RECNAIIGQT REDKIVRLES LMDGVLSKDD FLDEEFASLM HEHKLLKDMY ENHPEVLQTR IELKRVQEEL ESFKNFYGDM GEREVLLEEI HDLKAQLQCY
1001: TDSSLTSARR RGSLLKLTYA CDPNQAPQLN TIPESVDEGP EKTLEQERLR WTEAESNWIS LAEELRTELD TNRLLMEKQK RELDTEKRCA EELTEAMQMA
1101: MQGHARMIEQ YADLEEKHIQ LLARHRRIRE GIDDVKKAAA RAGVKGAESR FINALAAEIS ALKVQREKEV RYFRDENKSL QSQLRDTAEA VQAAGELLVR
1201: FKEAEEGLTF AQKRAMDAEY EASEAYKKVD KLKRKYETEI STVNQQHNAE PQNPIESLQA SCNDDAMAKY DEPSASDGDN QWREEFQPFY KKDEELSKLA
1301: EPSWFSGYDR CNI

Arabidopsis Description

KIN12BKinesin-like protein KIN-12B [Source:UniProtKB/Swiss-Prot;Acc:Q8L7Y8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.