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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 3
  • cytosol 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra017256.1-P Field mustard cytosol 98.84 92.77
CDX75064 Canola cytosol 93.56 87.81
CDX84151 Canola cytosol 92.92 86.61
AT2G36200.2 Thale cress cytosol 90.6 82.5
VIT_08s0007g03090.t01 Wine grape nucleus 68.53 64.32
Solyc09g010060.2.1 Tomato cytosol 67.16 63.16
PGSC0003DMT400023094 Potato cytosol 66.74 62.76
KRG96202 Soybean cytosol 66.21 62.33
KRH67944 Soybean cytosol 65.89 62.03
Solyc10g083310.1.1 Tomato cytosol 64.31 60.3
GSMUA_Achr10P... Banana cytosol 61.35 57.58
EES14087 Sorghum cytosol 60.93 57.19
Zm00001d031943_P002 Maize cytosol 60.72 56.82
TraesCS7D01G278800.1 Wheat cytosol 60.3 56.76
TraesCS7A01G279000.1 Wheat cytosol 60.3 56.76
TraesCS7B01G181200.1 Wheat cytosol 60.08 56.56
Zm00001d049938_P011 Maize cytosol 60.08 54.45
HORVU7Hr1G059220.43 Barley cytosol 60.4 54.06
PGSC0003DMT400072611 Potato cytosol 32.42 52.12
CDY31717 Canola cytosol, plastid 42.77 38.68
CDX77192 Canola cytosol, plastid 42.56 38.53
CDY23691 Canola cytosol, plastid 42.13 37.57
CDX82979 Canola cytosol, plastid 41.92 37.38
CDX93381 Canola cytosol, plastid 37.49 32.24
CDY18447 Canola cytosol, plastid 37.49 31.61
CDY03483 Canola cytosol 5.81 31.07
CDX75327 Canola nucleus 7.29 25.56
CDX77491 Canola cytosol, plastid 8.66 22.47
CDX68941 Canola cytosol 10.88 21.55
CDX85120 Canola cytosol, plastid 8.98 20.58
CDY47900 Canola cytosol 12.99 17.8
CDY22404 Canola nucleus 13.62 16.8
CDY41952 Canola nucleus 14.26 16.61
CDY42594 Canola nucleus 14.04 16.18
CDY34261 Canola cytosol 14.26 15.94
CDY67820 Canola cytosol 13.83 15.86
CDY67829 Canola cytosol 13.83 15.86
CDY19973 Canola cytosol 17.32 15.85
CDX85308 Canola cytosol 17.21 15.84
CDX99601 Canola nucleus 13.62 15.77
CDY15900 Canola nucleus 14.04 15.76
CDY45912 Canola cytosol 17.11 15.74
CDX86343 Canola cytosol 17.0 15.65
CDY63235 Canola cytosol 17.11 15.59
CDY35769 Canola cytosol 17.0 15.57
CDX82016 Canola nucleus 14.04 15.43
CDY13822 Canola nucleus 14.04 15.43
CDY03482 Canola cytosol 14.99 14.87
CDY08463 Canola cytosol, plastid 15.1 14.71
CDY01095 Canola cytosol, plastid 14.99 14.61
CDY04671 Canola plastid 13.83 14.59
CDY08179 Canola plastid 13.83 14.59
CDY04998 Canola plastid 14.99 14.56
CDY30599 Canola cytosol 15.73 14.52
CDY17754 Canola cytosol 15.73 14.48
CDX72718 Canola plastid 15.52 14.45
CDY14073 Canola plastid 14.89 14.43
CDX90305 Canola plastid 15.52 14.23
CDY22394 Canola plastid 15.52 14.18
CDY12116 Canola plastid 15.42 14.13
CDX81870 Canola plastid 14.15 14.06
CDY21709 Canola plastid 13.94 13.91
CDY26167 Canola cytosol, plastid 14.26 13.78
CDY19208 Canola cytosol 14.15 13.76
CDY30956 Canola cytosol, plastid 13.2 13.72
CDX82022 Canola plastid 15.42 13.63
CDX87944 Canola cytosol 18.16 13.61
CDY42843 Canola cytosol 18.16 13.55
CDY47004 Canola cytosol 18.06 13.55
CDY44836 Canola cytosol 12.99 13.53
CDY55295 Canola cytosol 18.06 13.48
CDY27279 Canola cytosol 11.4 13.24
CDY45884 Canola cytosol, plastid 9.08 13.09
CDY58692 Canola nucleus 17.63 13.04
CDY02183 Canola nucleus 17.63 12.94
CDX77978 Canola cytosol 13.09 12.56
CDY45220 Canola cytosol 13.41 12.51
CDX73746 Canola cytosol 12.78 12.5
CDY30779 Canola cytosol 12.99 12.44
CDY18100 Canola cytosol, plastid 17.11 12.39
CDY56229 Canola cytosol, plastid 17.11 12.32
CDY36055 Canola plastid 13.73 12.25
CDX74009 Canola cytosol 16.16 12.2
CDY29004 Canola cytosol 12.99 12.17
CDX90660 Canola cytosol 12.88 11.91
CDY07951 Canola cytosol 16.05 11.83
CDX82261 Canola plastid 13.83 10.73
CDX72728 Canola cytosol 8.03 10.31
CDX75326 Canola cytosol 3.7 9.62
CDX92129 Canola cytosol 17.11 8.48
CDX95855 Canola cytosol 17.74 8.3
CDY12957 Canola cytosol 6.65 7.63
CDY70999 Canola cytosol, mitochondrion 5.49 7.01
CDY71066 Canola cytosol, mitochondrion 5.39 6.89
CDX99277 Canola cytosol 19.22 6.73
CDX92299 Canola cytosol 19.11 6.63
CDY02395 Canola nucleus 4.44 6.25
Protein Annotations
MapMan:20.1.3.4Gene3D:3.40.850.10GO:A0A078I3P6UniProt:A0A078I3P6EnsemblPlants:CDY43743ProteinID:CDY43743
ProteinID:CDY43743.1ncoils:CoilGO:GO:0000166GO:GO:0003674GO:GO:0003774GO:GO:0003777
GO:GO:0003824GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0007018GO:GO:0008017
GO:GO:0008150GO:GO:0009987GO:GO:0016787EnsemblPlantsGene:GSBRNA2T00077236001InterPro:IPR001752InterPro:IPR036961
InterPro:Kinesin-like_famInterPro:Kinesin_motor_domInterPro:Kinesin_motor_dom_sfInterPro:P-loop_NTPasePFAM:PF00225PRINTS:PR00380
PFscan:PS50067PANTHER:PTHR24115PANTHER:PTHR24115:SF591SMART:SM00129SUPFAM:SSF52540UniParc:UPI0004EE96E5
SEG:seg:::::
Description
BnaAnng07580DBnaAnng07580D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I3P6]
Coordinates
chrLK032567:+:168212..174416
Molecular Weight (calculated)
106860.0 Da
IEP (calculated)
5.279
GRAVY (calculated)
-0.709
Length
947 amino acids
Sequence
(BLAST)
001: MSSRHDKEKG VNVQVLLRCR PFSDDELRSN APQVLTCNDL QREVAVSQNI AGKHTDRVFT FDKVFGPSAK QKELYDQAVV PIVNEVLEGF NCTIFAYGQT
101: GTGKTYTMEG ECRRSKGGHS GGLPAEAGVI PRAVKQIFDT LEGQEAEYSV KVTFLELYNE EITDLLAPED ISRVASEDKQ KKPLPLMEDG KGGVLVRGLE
201: EEIVTSANEI FTLLERGSSK RRTAETFLNK QSSRSHSLFS ITIHIKEATP EGEELIKLVS HSSTETKTCI IATVSPAVHC LEETLSTLDY AHRAKHIRNK
301: PEVNQKMMKS TLIKDLYGEI ERLKAEVYAS REKNGVYMPK ERYYQEESER KAMAEQIEQM GGQIENYQKK LEELQDKYTG QVRECSDLTS RLDSTEKSLS
401: QTSKMLASTD EELKKSQYAM KEKDFIISEQ KKSENVLVQQ ACVLQSNLEK ATKENESLHQ KIGKENKLSA DNRKVVDNYQ AELSEQISNL FSMVASCLSQ
501: QNAQLHGVNK LSQSRLEAHN KAILEMKKKV GASRDLYSSH LEAVQNVVRL HKANSNACLE EVSALTTSSA SSIDEFLASG EETTSSLFDE LQNALTSHQR
601: EMALFARELR QKFHTTMEQT QEMSEYTSTF FQKLMQESKN AENRAAEAND NQINSIIDFQ KTYEAQSKYD TEKLIADLTN LVSCHVRRQH ELVDSRLSNF
701: KDAVSSNKTF LDEHVSTVNT LAKDAKRKWE TFSMQAENDA REGADFSAAK HCQMELLLQQ SVGHAESAFK HCKLTHESLK EMNSKQVADV SSLVKSACDN
801: NEQHDGEVES ARTAAEEDVT KNSDEIIQQI DGMSEDEKVF VSQILENVKT HEKSLESFQH DHCCQARCIE DKAQETFQQR YMEYEPTGTT PSKSEPDVPT
901: KDTIESLRAM PVETLVEVFR ENNSYESFAA KESKPQQLTR SPLSQVN
Best Arabidopsis Sequence Match ( AT2G36200.2 )
(BLAST)
0001: MSSRHDKEKG VNVQVLLRCR PFSDDELRSN APQVLTCNDL QREVAVSQNI AGKHIDRVFT FDKVFGPSAQ QKDLYDQAVV PIVNEVLEGF NCTIFAYGQT
0101: GTGKTYTMEG ECRRSKSAPC GGLPAEAGVI PRAVKQIFDT LEGQQAEYSV KVTFLELYNE EITDLLAPED LSRVAAEEKQ KKPLPLMEDG KGGVLVRGLE
0201: EEIVTSANEI FTLLERGSSK RRTAETFLNK QSSRSHSLFS ITIHIKEATP EGEELIKCGK LNLVDLAGSE NISRSGARDG RAREAGEINK SLLTLGRVIS
0301: ALVEHLGHVP YRDSKLTRLL RDSLGGRTKT CIIATVSPAV HCLEETLSTL DYAHRAKNIR NKPEVNQKMM KSTLIKDLYG EIERLKAEVY ASREKNGVYM
0401: PKERYYQEES ERKVMAEQIE QMGGQIENYQ KVSFFLLCRS KFYTYMWELH VNNGYLHICC DQQLEELQDK YVGQVRECSD LTTKLDITEK NLSQTCKVLA
0501: STNEELKKSQ YAMKEKDFII SEQKKSENVL VQQACILQSN LEKATKDNSS LHQKIGREDK LSADNRKVVD NYQVELSEQI SNLFNRVASC LSQQNVHLQG
0601: VNKLSQSRLE AHNKAILEMK KKVKASRDLY SSHLEAVQNV VRLHKANANA CLEEVSALTT SSACSIDEFL ASGDETTSSL FDELQSALSS HQGEMALFAR
0701: ELRQRFHTTM EQTQEMSEYT STFFQKLMEE SKNAETRAAE ANDSQINSII DFQKTYEAQS KSDTDKLIAD LTNLVSSHIR RQHELVDSRL HNFKDAVSSN
0801: KTFLDEHVSA VNNLTKDAKR KWETFSMQAE NEAREGADFS AAKHCRMELL LQQSVGHAES AFKHCKITHE SLKEMTSKQV TDVSSLVRSA CDSNEQHDAE
0901: VDSARTAAEK DVTKNSDDII QQIERMSEDE KASVSKILEN VRSHEKTLES FQQDQCCQAR CIEDKAQETF QQQYMEYEPT GATPTKNEPE IPTKATIESL
1001: RAMPIETLVE EFRENNSYES FATKETKPQQ LTRSPLSQVN
Arabidopsis Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4ILV6]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.