Factsheet for PGSC0003DMT400012577

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
plasma membrane 1
cytosol 3
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g077540.2.1	Tomato	cytosol	96.5	96.5
VIT_18s0001g08700.t01	Wine grape	cytosol	69.2	68.21
KRG88751	Soybean	cytosol	60.14	60.44
KRH05550	Soybean	cytosol	59.54	59.9
Bra027851.1-P	Field mustard	cytosol	57.13	57.26
CDY67829	Canola	cytosol	57.13	57.26
CDY67820	Canola	cytosol	57.0	57.14
AT1G59540.1	Thale cress	cytosol	56.64	56.99
KXG28623	Sorghum	cytosol	43.6	56.76
TraesCS1A01G230600.1	Wheat	cytosol	43.72	56.65
HORVU1Hr1G053090.5	Barley	cytosol	43.6	56.49
TraesCS4D01G158800.1	Wheat	cytosol	43.48	56.34
PGSC0003DMT400007659	Potato	cytosol	22.22	55.09
GSMUA_Achr7P27470_001	Banana	cytosol	46.01	55.06
Zm00001d052615_P001	Maize	cytosol	43.48	53.89
CDY45884	Canola	cytosol, plastid	40.22	50.68
Os11t0552600-01	Rice	cytosol, extracellular	22.34	50.27
CDY27279	Canola	cytosol	47.58	48.28
PGSC0003DMT400035325	Potato	plastid	21.86	18.91
PGSC0003DMT400009519	Potato	nucleus	21.01	18.83
PGSC0003DMT400023094	Potato	cytosol	22.46	18.47
PGSC0003DMT400031343	Potato	nucleus	21.14	18.06
PGSC0003DMT400009131	Potato	cytosol	22.1	17.89
PGSC0003DMT400040181	Potato	cytosol, plastid	22.22	17.47
PGSC0003DMT400078142	Potato	cytosol, plastid	21.74	17.24
PGSC0003DMT400005133	Potato	cytosol, plastid	20.41	16.42
PGSC0003DMT400049453	Potato	cytosol	20.65	16.33
PGSC0003DMT400011905	Potato	cytosol, plastid	22.46	14.23
PGSC0003DMT400024240	Potato	cytosol	20.77	14.19
PGSC0003DMT400057119	Potato	plastid	18.72	13.03
PGSC0003DMT400072611	Potato	cytosol	4.11	5.77
PGSC0003DMT400008772	Potato	cytosol	3.14	5.43
PGSC0003DMT400042877	Potato	nucleus	4.35	4.3
PGSC0003DMT400014403	Potato	nucleus	2.54	4.25
PGSC0003DMT400020657	Potato	plastid	0.48	3.51

Protein Annotations

EntrezGene:102582775	MapMan:20.1.3.6	Gene3D:3.40.850.10	ncoils:Coil	GO:GO:0000166	GO:GO:0003674
GO:GO:0003774	GO:GO:0003777	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005856	GO:GO:0005874	GO:GO:0007018
GO:GO:0008017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016787	InterPro:IPR001752	InterPro:IPR036961
InterPro:Kinesin-like_fam	InterPro:Kinesin_motor_CS	InterPro:Kinesin_motor_dom	InterPro:Kinesin_motor_dom_sf	UniProt:M1A1G3	InterPro:P-loop_NTPase
PFAM:PF00225	EnsemblPlantsGene:PGSC0003DMG400004917	PGSC:PGSC0003DMG400004917	EnsemblPlants:PGSC0003DMT400012577	PRINTS:PR00380	ScanProsite:PS00411
PFscan:PS50067	PANTHER:PTHR24115	PANTHER:PTHR24115:SF490	SMART:SM00129	SUPFAM:SSF52540	UniParc:UPI0002947F56
RefSeq:XP_006356841.1	RefSeq:XP_006356842.1	SEG:seg	:	:	:

Description

ATP binding protein [Source:PGSC_GENE;Acc:PGSC0003DMG400004917]

Coordinates

chr4:-:66689345..66699317

Molecular Weight (calculated)

93827.7 Da

IEP (calculated)

5.535

GRAVY (calculated)

-0.588

Length

828 amino acids

Sequence
(BLAST)

001: MEKVSVAVRV RPARSNEENL NGTFWKVEDN RISLHKSLGT PISGVSYTFD HVFDQDCSNA RVYDLLTKDV IHAALEGFNG TAFAYGQTSS GKTFTMNGTQ
101: NDPGIIQRAV NEIFQKIEMT TNREFLIRVS YMEIYNEDIN DLFAVENQKL QIHESLDRGV FVAGLREEIV NDAEQVLELI QRGEVNRHFG ETNMNVRSSR
201: SHTIFRMVIE SKGKHNPDEA VRVSVLNLVD LAGSERIAKT GAGGVRLKEG KHINKSLMIL GNVINKLSEG GKQRGHIPYR DSKLTRILQP ALGGNAKTSI
301: ICTVAPEEVH IEESKGTLQF ASRAKRITNC VQVNEILNDA ALLKRQKREI EELRMKLQGS HSEVLEQEIL KLRNDLLTYE LEREKLAMEL EEERRSQKER
401: EQCIIEQQKN VHNLSNLTSV SGSNGHATQE ESGNSNSCQE DAFSTPCLKA APNAFVAKRS QRSQQTEYSP MPDAFSNFAD EDMWMKMNKG FVADLDSLHM
501: TPAVKVKSSL LDDENDDLST ENYKQEVQNL RRQLELVSEE RDELRRHHTE QVSLNKQLMS EVSELQQEAL LIREIPQRLC ESVTTCKDLY KDVFSVIQNF
601: VATDKSGMAK LLSTTNEIGT CLFSTLESHF SEAMDSDKSS IGNNSSIEAQ HVKVYDKLNR TISSLVLSDD EISSNPSLGS QYKDCTLGGE IACWKKKLDE
701: DIKTIQEKYQ NLEKELDLNN QLLATSRDRY NSLEREFHLL KEERDVLVQN VSSSSEKLEL FTNQNEKVLD TLNAEVKRRK HLEEEIKQFT AAFAFRQSSL
801: VSLRSDFDSV IDSFKAQKPI SISRSPGF

Best Arabidopsis Sequence Match ( AT1G59540.1 )
(BLAST)

001: MEKICVAVRV RPPAPENGAS LWKVEDNRIS LHKSLDTPIT TASHAFDHVF DESSTNASVY ELLTKDIIHA AVEGFNGTAF AYGQTSSGKT FTMTGSETDP
101: GIIRRSVRDV FERIHMISDR EFLIRVSYME IYNEEINDLL AVENQRLQIH EHLERGVFVA GLKEEIVSDA EQILKLIDSG EVNRHFGETN MNVHSSRSHT
201: IFRMVIESRG KDNSSSDAIR VSVLNLVDLA GSERIAKTGA GGVRLQEGKY INKSLMILGN VINKLSDSTK LRAHIPYRDS KLTRILQPAL GGNAKTCIIC
301: TIAPEEHHIE ESKGTLQFAS RAKRITNCAQ VNEILTDAAL LKRQKLEIEE LRMKLQGSHA EVLEQEILNL SNQMLKYELE CERLKTQLEE EKRKQKEQEN
401: CIKEQQMKIE NLNNFVTNSD FKRNQSEDFI ISRKTPDGLC NVNDTSDVPG TPCFKSASRS FVVARSNNYS GLSDFSPMVH SLGDVADEDT WMKLNKGFVA
501: DLDQIQFTPA VKCQPTPLSI ATTECPRENH SEVEDLKSRI QLLTNENDSL QVKFNEQVLL SNNLMQEMSE LKQETLTVKE IPNRLSESVA NCKDVYKDVI
601: VTMKSLITDK ESPTANLLLG TTEITTSLLA TLETQFSMIM DGQKTGSSID HPLSDHWETL RVNLKNTTTL LLSDAQAKDE FLNSHNKGQE TAALEEKKLK
701: SELIIIKERY NELEKELCLD KQLLEASRES HEKLIKEVQF LKEERDSLDR KISQSTQRLR VIASDKENAL KDLNVEVKRR KDMEEEIKHI SIAFATRHKS
801: FVSFHSEIKS KMQKLTTQNS KAP

Arabidopsis Description

KIN7NKinesin-like protein KIN-7N [Source:UniProtKB/Swiss-Prot;Acc:Q9S7P3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.