Factsheet for PGSC0003DMT400009519

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g081060.2.1	Tomato	nucleus	97.4	97.19
HORVU4Hr1G038080.1	Barley	cytosol	10.28	66.43
GSMUA_AchrUn_...	Banana	cytosol	22.08	65.38
HORVU2Hr1G021730.1	Barley	cytosol	19.16	62.32
CDY03483	Canola	cytosol	10.93	57.06
VIT_16s0050g02080.t01	Wine grape	cytosol, mitochondrion	12.77	51.75
GSMUA_Achr1P07780_001	Banana	cytosol	44.26	49.46
GSMUA_Achr2P03390_001	Banana	cytosol	45.24	47.23
VIT_18s0001g13580.t01	Wine grape	cytosol	49.68	47.22
Os09t0528000-01	Rice	cytosol	43.4	46.52
TraesCS5A01G317000.1	Wheat	cytosol	43.83	45.92
Os02t0645100-01	Rice	cytosol	43.83	45.81
TraesCS5D01G323300.1	Wheat	cytosol	43.72	45.8
KXG31119	Sorghum	cytosol	43.61	45.69
HORVU5Hr1G081070.1	Barley	cytosol	44.05	45.68
CDY34261	Canola	cytosol	41.77	45.57
Os04t0538800-01	Rice	nucleus	46.32	45.29
Zm00001d051308_P002	Maize	cytosol	43.07	45.23
TraesCS5B01G317600.1	Wheat	cytosol	43.4	45.16
KXG26789	Sorghum	nucleus	46.43	45.11
Zm00001d006197_P003	Maize	cytosol	43.72	45.04
TraesCS6A01G239100.1	Wheat	cytosol	42.42	45.01
TraesCS6B01G285500.3	Wheat	cytosol	42.42	45.01
TraesCS6D01G221400.1	Wheat	cytosol	42.42	45.01
TraesCS2B01G405200.1	Wheat	nucleus	45.67	44.99
GSMUA_Achr2P11920_001	Banana	nucleus	45.24	44.8
TraesCS2A01G387400.1	Wheat	nucleus	45.13	44.74
HORVU2Hr1G092250.1	Barley	nucleus	45.13	44.55
TraesCS2D01G385000.1	Wheat	nucleus	45.13	44.5
HORVU6Hr1G061060.2	Barley	cytosol	41.99	43.94
Zm00001d002817_P001	Maize	nucleus	44.91	43.82
KXG36051	Sorghum	cytosol	43.18	43.23
KRH61076	Soybean	cytosol	42.53	42.17
PGSC0003DMT400031343	Potato	nucleus	43.83	41.8
AT4G24170.1	Thale cress	cytosol	45.24	41.63
CDY03482	Canola	cytosol	42.86	41.47
PGSC0003DMT400009131	Potato	cytosol	45.56	41.15
GSMUA_Achr7P05800_001	Banana	cytosol	45.67	40.81
KXG25443	Sorghum	cytosol	45.02	40.59
GSMUA_Achr4P24730_001	Banana	cytosol	46.65	40.58
Os02t0644400-00	Rice	cytosol	27.6	40.48
Zm00001d025951_P008	Maize	nucleus	45.45	40.46
KRH51754	Soybean	cytosol	42.97	40.02
GSMUA_AchrUn_...	Banana	cytosol	25.76	40.0
Os08t0547500-01	Rice	cytosol	44.16	39.34
Zm00001d021269_P013	Maize	cytosol	43.61	39.32
TraesCS7A01G270800.2	Wheat	nucleus	43.51	39.22
TraesCS7D01G271200.2	Wheat	nucleus	43.61	38.94
PGSC0003DMT400007659	Potato	cytosol	14.07	38.92
HORVU7Hr1G057140.4	Barley	nucleus	43.83	38.76
TraesCS7B01G169100.2	Wheat	nucleus	43.83	38.76
Bra035302.1-P	Field mustard	cytosol	43.51	37.92
PGSC0003DMT400035325	Potato	plastid	38.2	36.89
Bra013771.1-P	Field mustard	cytosol	44.05	34.4
AT5G42490.1	Thale cress	cytosol	35.93	30.54
CDY12957	Canola	cytosol	24.57	27.48
PGSC0003DMT400014403	Potato	nucleus	12.01	22.47
PGSC0003DMT400012577	Potato	cytosol	18.83	21.01
CDY02395	Canola	nucleus	14.61	20.09
PGSC0003DMT400078142	Potato	cytosol, plastid	17.86	15.8
PGSC0003DMT400040181	Potato	cytosol, plastid	17.97	15.76
PGSC0003DMT400049453	Potato	cytosol	17.1	15.09
PGSC0003DMT400005133	Potato	cytosol, plastid	16.77	15.06
PGSC0003DMT400023094	Potato	cytosol	15.8	14.5
PGSC0003DMT400024240	Potato	cytosol	18.4	14.03
PGSC0003DMT400011905	Potato	cytosol, plastid	17.97	12.7
PGSC0003DMT400057119	Potato	plastid	15.15	11.76
PGSC0003DMT400008772	Potato	cytosol	2.6	5.01
PGSC0003DMT400042877	Potato	nucleus	4.22	4.66
PGSC0003DMT400020657	Potato	plastid	0.54	4.39
PGSC0003DMT400072611	Potato	cytosol	2.16	3.4

Protein Annotations

EntrezGene:102584230	MapMan:20.1.3.6	Gene3D:3.40.850.10	ncoils:Coil	GO:GO:0000166	GO:GO:0003674
GO:GO:0003774	GO:GO:0003777	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
GO:GO:0007018	GO:GO:0008017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016787	InterPro:IPR001752
InterPro:IPR036961	InterPro:Kinesin-like_fam	InterPro:Kinesin_motor_dom	InterPro:Kinesin_motor_dom_sf	UniProt:M0ZWE9	InterPro:NACK_C
InterPro:P-loop_NTPase	PFAM:PF00225	PFAM:PF11995	EnsemblPlantsGene:PGSC0003DMG400003713	PGSC:PGSC0003DMG400003713	EnsemblPlants:PGSC0003DMT400009519
PRINTS:PR00380	PFscan:PS50067	PANTHER:PTHR24115	PANTHER:PTHR24115:SF610	SMART:SM00129	SUPFAM:SSF52540
UniParc:UPI00029673E5	RefSeq:XP_006342007.1	SEG:seg	:	:	:

Description

ATP binding protein [Source:PGSC_GENE;Acc:PGSC0003DMG400003713]

Coordinates

chr4:+:70472197..70477995

Molecular Weight (calculated)

103628.0 Da

IEP (calculated)

5.321

GRAVY (calculated)

-0.611

Length

924 amino acids

Sequence
(BLAST)

001: MSSVYGEEAS QYGDDHGSVA HEEKEKIFVA VRLRPLNERE ITCNDVSDWE CINNTTILYK NSMSERSLFP TACAYDRVFG YDCSTRQVYE EAAKGVALSV
101: LSGINSSIFA YGQTSSGKTY TMSGITEYTL ADIYDHICRT VDREFTLKFS AMEIYNEVVR DLLTPEDTPL RLLDDPERGT VVEKLTEVTL KDWNHLKELL
201: SVCEAQRKIG ETALNEVSSR SHQILRLTVE STAKKFVGLN SSTLTAAVNF VDLAGSERAS QTMSANVRLK EGSHINRSLL TLGTVIRKLS KKGNGHIPFR
301: DSKLTRILQN SLGGNARTAI ICTMSPAHSH VEQSRNTLLF ATCAKNVITN AKVNVVMSEK ALVKQLRKEL ARLEAELRSL SALAASGGSA EALKEKEDLI
401: EKMSREIREL TQQRDLAQSR FHNFPSSGSW TELSSVSSPD KAQWLDDCAA SEVSECVYPF RPDGAVYQYG RYEGLNSNKL GEQIPEPPED QYLCDDTSPR
501: LFIEKYFGPD PCKGWENSAQ RTVQNLEDNC KEVQCVEVDS NTKSISSDKH SSPRKGDQES SFIDKDHNDK EPKQTSNLVV EHSSSSSSDT DSDSNNLPRS
601: RSSEAIMINV PVSEGSEVIK ENGDISSESE EESSIKKIDI EEKTSQPELS ADNVKVLSKE HNHSFTIEVK LKMSGEDSEK ICVEEPKMLG EDSTKICAEG
701: EVAKSVPEKQ SGDNLVQDNE PTSKDLGNFA GDSLNSENES ELSPSRQWME FEKQRQEIIE LWNACNVPLV HRTYFFLLFK GDPTDSVYME VELRRLSYLK
801: NAFSLGAKVV KDGQIFSQAA SLNALNRERE MLSKLLLKKL SSKERDNLYE KRGIGLKTKR RRLQLCHQLW KDTKDMDHIK ESAALISKLV GFEAQNEVPK
901: EMFELNFSPG PKNLRSFSWK PRKA

Best Arabidopsis Sequence Match ( AT2G21300.5 )
(BLAST)

001: MGAIAGEELK KMEKTQVHVA REEKILVLVR LRPLNEKEIL ANEAADWECI NDTTVLYRNT LREGSTFPSA YSFDRVYRGE CPTRQVYEDG PKEVALSVVK
101: GINSSIFAYG QTSSGKTYTM SGITEFAVAD IFDYIFKHED RAFVVKFSAI EIYNEAIRDL LSPDSTPLRL RDDPEKGAAV EKATEETLRD WNHLKELISV
201: CEAQRKIGET SLNERSSRSH QIIKLTVESS AREFLGKENS TTLMASVNFI DLAGSERASQ ALSAGARLKE GCHINRSLLT LGTVIRKLSN GRQGHINYRD
301: SKLTRILQPC LGGNARTAIV CTLSPARSHV EQTRNTLLFA CCAKEVTTKA QINVVMSDKA LVKQLQRELA RLESELRNPA PATSSCDCGV TLRKKDLQIQ
401: KMEKQLAEMT KQRDIAQSRL EDFMKMVEHD ASSKAGTPHF RNRTNKWEDG SVSEISGVVD PDRTSFISDG TSTPLSTARA HVRSHSDDDL EEEMSPRHSG
501: DQSEEYCKEV QCIEMEESTR DINNDSEERT DAETLLGHNA EANGETGSAQ HRIPSSVRSV RRRKSWSRGD TMTGTSTPPD ALETDYRGRP EGHGFAFPDL
601: EFGSGGKLLR NDSMTSRGSD STEAHSIGTP LVGEEGGITS IRSFVEGLKE MVSDPENSGK MRKDIGVDAM EEEVSGTMTN WSEEFERQRE QILGLWQTCH
701: VSLVHRTYFF LLFTGDQADS IYIGVELRRL SFMKESFSQG NHAFERGQTL TIASSLKALH RERRMLSKLV GKRFTGEERK RLYQKFGIAV NSKRRRLQLA
801: NQLWSKPNDI THAVESAAVV AKLVRFVEQG RAMKEMFGLS FTPPLPTTRR SLNWRKSMAT LF

Arabidopsis Description

KIN7EKinesin-like protein KIN-7E [Source:UniProtKB/Swiss-Prot;Acc:F4IGL2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.