Factsheet for PGSC0003DMT400057119

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
plasma membrane 1
mitochondrion 2
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc07g065210.2.1	Tomato	plastid	96.97	96.89
VIT_19s0090g01600.t01	Wine grape	cytosol, plastid	57.23	56.89
KRH73858	Soybean	plastid	53.87	52.63
KRH14292	Soybean	cytosol, plastid	53.53	52.21
KRH46292	Soybean	plastid	49.08	51.05
KRG98582	Soybean	plastid	48.57	50.66
AT3G20150.1	Thale cress	plastid	44.37	47.4
CDY36055	Canola	plastid	42.1	47.22
GSMUA_Achr10P...	Banana	cytosol, plastid	42.77	45.12
Zm00001d033112_P001	Maize	mitochondrion	40.17	44.22
TraesCS5B01G037500.1	Wheat	mitochondrion	41.01	44.16
EER91274	Sorghum	mitochondrion	41.51	43.87
Os03t0587200-01	Rice	cytosol	41.51	43.76
TraesCS5A01G036600.1	Wheat	mitochondrion	40.25	43.66
HORVU5Hr1G009350.3	Barley	mitochondrion	41.09	43.62
TraesCS5D01G044700.1	Wheat	mitochondrion	40.84	43.32
Bra001776.1-P	Field mustard	plastid	43.61	42.06
CDX82261	Canola	plastid	42.94	41.85
PGSC0003DMT400007659	Potato	cytosol	9.08	32.34
PGSC0003DMT400011905	Potato	cytosol, plastid	34.96	31.83
PGSC0003DMT400042877	Potato	nucleus	18.32	26.05
PGSC0003DMT400012577	Potato	cytosol	13.03	18.72
PGSC0003DMT400040181	Potato	cytosol, plastid	15.8	17.85
PGSC0003DMT400005133	Potato	cytosol, plastid	15.21	17.59
PGSC0003DMT400078142	Potato	cytosol, plastid	15.38	17.53
PGSC0003DMT400049453	Potato	cytosol	14.2	16.14
PGSC0003DMT400023094	Potato	cytosol	13.45	15.89
PGSC0003DMT400009519	Potato	nucleus	11.76	15.15
PGSC0003DMT400024240	Potato	cytosol	15.38	15.1
PGSC0003DMT400035325	Potato	plastid	12.1	15.05
PGSC0003DMT400031343	Potato	nucleus	11.76	14.45
PGSC0003DMT400009131	Potato	cytosol	11.76	13.69
PGSC0003DMT400008772	Potato	cytosol	3.87	9.6
PGSC0003DMT400014403	Potato	nucleus	2.94	7.09
PGSC0003DMT400072611	Potato	cytosol	3.36	6.79
PGSC0003DMT400020657	Potato	plastid	0.34	3.51

Protein Annotations

EntrezGene:102592999	MapMan:20.1.3.10	Gene3D:3.40.850.10	ncoils:Coil	GO:GO:0000166	GO:GO:0003674
GO:GO:0003774	GO:GO:0003777	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
GO:GO:0007018	GO:GO:0008017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016787	InterPro:IPR001752
InterPro:IPR036961	InterPro:Kinesin-like_fam	InterPro:Kinesin_motor_dom	InterPro:Kinesin_motor_dom_sf	UniProt:M1C0G0	InterPro:P-loop_NTPase
PFAM:PF00225	EnsemblPlantsGene:PGSC0003DMG400022190	PGSC:PGSC0003DMG400022190	EnsemblPlants:PGSC0003DMT400057119	PRINTS:PR00380	PFscan:PS50067
PANTHER:PTHR24115	PANTHER:PTHR24115:SF529	SMART:SM00129	SUPFAM:SSF52540	UniParc:UPI0002961B30	RefSeq:XP_006346165.1
SEG:seg	:	:	:	:	:

Description

Chromosome-associated kinesin KIF4A [Source:PGSC_GENE;Acc:PGSC0003DMG400022190]

Coordinates

chr7:-:55293713..55300284

Molecular Weight (calculated)

132836.0 Da

IEP (calculated)

5.195

GRAVY (calculated)

-0.654

Length

1190 amino acids

Sequence
(BLAST)

0001: MSENRFLGNI SASSFRNLLP KSVSTKKKLS SSRFKHKMNS ENVAPIDPNI QISDPPLLPT SSILKKPVLK TIDSDVSAEL TRSVAQEQTS EAPDPPVKVV
0101: ARIRPANGIE SGSQAVRKVS DTSVCVADRK FNFDMVFGSN SNQEDIFQSV GAPLVKDALA GYNTSLLAYG QTGSGKTYTM WGPPSSIVEV PSPNGLQGIV
0201: PRIFQTLFSS IQKEQENSEG KQINYQCRCS FLEIYDEHIG DLLDPTQRNL KIMDDPRVGF YVENITEEYV STYEDVSQML IKGLSSRKVG STSINSKSSR
0301: SHIVFTCVIE SWCKESSSTC FGSSKMSRMS LVDLAGFDKN IPDDAGKQFV KEGKYVKKST SLLGHLVNVL SERSQSRKLE DVSYSSSTLT HLMRESLGGN
0401: AKLSVICAIS PENKHNSETV STLRFGKRVK LIPNEPLVNE ITEDDVNGLS DQIRQLKEEL IRARSSASIS VGSNYGSFRG PNVRESLNQL RVSLNRSLIL
0501: PNIDNEREEE EVHINEDDIK ELQLQIDNLR GSRGNNSNSL KYSSGESEHY ISCSEESEGE EINSEEILEE TLDADHEMET LQPEYCSSIS IGPSRHSADL
0601: PGPVLSESPK FRNMQRKSLI ISSEDNIQCS SKSSELPSLP QKQDLVQSSL RSSRIFPGPT ESLAASLHRG LEIIDYHQRN SASNKSLVSF SFEHLAVNPS
0701: SMSNDKANAS IQTSSEEGQT SPFVATSFLC PKCKTKATSS SVVKDSTGTW MVPMEGASTE QDSEKVLFQA LEREKQLESV CKDQADKLEQ LNQLLAHCKC
0801: TKEQSSLVDC GNDVVDLHDN ENQASLIYQN GSQSPNIPKL LKWDDESPEP EAAGEKYETK EIQGNVENCG GKKMFDMAER EALLEEIGGL RSQLKSDGAS
0901: TNKSIERTRS SLLAQSMQLR KSGVYAATSS GEELEKERER WTEMESEWIC LTDELRIDLE AYRQRAEKVA MELMLEKKCT DELDDALKRS VFGQARIIEH
1001: YAELQEKYND LAEKHKLILQ GIQDVKNAAA KAGKKGHGAR FAKSLAAELS ALRVERERER EMLKKENKSL RVQLKDTAEA VHAAGELLVR LREAEETASL
1101: AEENFTQSKE ENERLKKQIE KLKRKHKMEM ITMKQYLAES RLPEAALRPP IYRQDSDVAN NDNNNTIQHS EYDDDQSWRA EFGAIYQEHI

Best Arabidopsis Sequence Match ( AT3G20150.1 )
(BLAST)

0001: MADNRIAGSL PTSSKWSFLP KSVSSHFKPS SNPRSSNPDI ENAPPQNPNI HNPRNQSVSS KSTAYKNQMD SPNCRSQVSA SRPRAISALK TRNEVEEEGA
0101: SNPHVKVVVR IKPTKEYCWK VKKVSKVSYS VRDRHFTFDS VLDSNLNQDD VFQQIGVPLV RDALSGYNTS VLSYGQNGSG KTYTMWGPAG SMLEDPSPKG
0201: EQGLAPRIFQ MLFSEIQREK IKSGGKEVNY QCRCSFLEIY NGQISDLIDQ TQRNLKIKDD AKNGIYVENL TEEYVDSYED VAQILMKGLS SRKVGATSTS
0301: FQSSRSHVIL SFIVESWNKG ASSRCFNTTR TSRINLVDLA GAGTNERDAT KHCVEEEKFL KKSLSELGHV VNSLAENVHP GISDRSLHKT SCLTHLLQES
0401: LGGNSKLTIL CNIFPSDKDT KRTMSTLRFG ERAKAMGNKP MINEISEEDV NDLSDQIRLL KEELSKVKAD ACHSVGSKND YFGAKNARES LNQLRVSLNR
0501: SLMLPKIDND EEEITVDEDD FKELHLQIKS LRGSFNQKLK KFPVNRDSVN SSFVTAFGES ELMDDDEICS EEVEVEENDF GESLEEHDSA ATVCKSSEKS
0601: RIEEFVSENS ISISPCRQSL ILQEPIQSES PKFRDSLRKS IALSSSCLRN QNSLAKSIKS TCFAESQHIR SSLRGSKIFT GSTESLAASL RRGLDIIDNP
0701: MNPASNRCSV SLSSDNLTMQ PPTDDRLPLS PLCPTCRICS SKLPSVVEGD GYHMEGVLEK QQELEKLCSE QAAKIEQLTR LVGQHKLQTE DETEKLMGAS
0801: NGERLPSANE NQLLSCITET YDVKQISDDD SKKTDFDIGE KEALLKEIED LKKKLQTPVT MSTNELRSSL LARSFQLRSK NAEKDIEEER LRCTEMESEW
0901: ISLTDEFRVE IETQRTRAEK AEAQLKQEKL SSEELEDALR RAVLGHARFV EHYTELQEKY NDLCSKHKAT VEWITELKKA VAKAGKKGCG SRFAKSLASE
1001: LSALRVERER ERDLLKKENI SLKIQLRNTA EAVHTAGEVL VRLREAEQSA SAAEEKFNEV EEENEKLKKK MEKLKRRHKL EVVTIKKSLK QNTLPESALQ
1101: PLHQRNSAIE EEGM

Arabidopsis Description

KIN12FKinesin-like protein KIN-12F [Source:UniProtKB/Swiss-Prot;Acc:F4JDI6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.