CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 4
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d033112_P001	Maize	mitochondrion	89.34	93.06
Os03t0587200-01	Rice	cytosol	77.35	77.15
TraesCS5B01G037500.1	Wheat	mitochondrion	71.23	72.58
TraesCS5A01G036600.1	Wheat	mitochondrion	70.69	72.56
TraesCS5D01G044700.1	Wheat	mitochondrion	72.11	72.37
HORVU5Hr1G009350.3	Barley	mitochondrion	71.58	71.9
GSMUA_Achr10P...	Banana	cytosol, plastid	51.15	51.06
VIT_19s0090g01600.t01	Wine grape	cytosol, plastid	46.36	43.61
CDY36055	Canola	plastid	39.34	41.75
PGSC0003DMT400057119	Potato	plastid	43.87	41.51
Solyc07g065210.2.1	Tomato	plastid	43.52	41.14
AT3G20150.1	Thale cress	plastid	39.7	40.13
KRH14292	Soybean	cytosol, plastid	43.34	40.0
KRH73858	Soybean	plastid	43.16	39.9
KRG98582	Soybean	plastid	39.34	38.83
KRH46292	Soybean	plastid	39.43	38.81
CDX82261	Canola	plastid	39.79	36.69
Bra001776.1-P	Field mustard	plastid	40.05	36.55
KXG25952	Sorghum	cytosol, plastid	33.21	32.92
KXG28623	Sorghum	cytosol	12.43	22.01
OQU89071	Sorghum	cytosol	15.99	17.44
EES14087	Sorghum	cytosol	14.48	16.15
EES18930	Sorghum	cytosol	15.01	16.06
KXG31200	Sorghum	mitochondrion, plastid	14.03	15.85
OQU90984	Sorghum	cytosol	17.41	15.65
EES09071	Sorghum	plastid	15.19	15.59
KXG38192	Sorghum	plastid	14.12	15.16
OQU78566	Sorghum	cytosol	15.45	14.88
KXG31119	Sorghum	cytosol	11.46	14.63
KXG35645	Sorghum	cytosol	15.72	14.43
KXG36051	Sorghum	cytosol	11.72	14.3
EES12188	Sorghum	plastid	14.39	14.0
KXG26789	Sorghum	nucleus	11.63	13.78
KXG30782	Sorghum	cytosol	15.45	13.75
EER95074	Sorghum	cytosol, plastid	12.43	13.23
EER89062	Sorghum	cytosol	10.92	12.95
KXG25443	Sorghum	cytosol	11.46	12.59
KXG36788	Sorghum	plastid	19.89	11.63
OQU79463	Sorghum	cytosol	21.23	8.87

Protein Annotations

MapMan:20.1.3.10	Gene3D:3.40.850.10	EntrezGene:8063001	UniProt:C5WTD1	ncoils:Coil	EnsemblPlants:EER91274
ProteinID:EER91274	ProteinID:EER91274.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003774	GO:GO:0003777
GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005856	GO:GO:0005871	GO:GO:0007018	GO:GO:0008017	GO:GO:0008150
GO:GO:0008574	GO:GO:0009987	GO:GO:0016787	InterPro:IPR001752	InterPro:IPR036961	InterPro:Kinesin-like_fam
InterPro:Kinesin_motor_dom	InterPro:Kinesin_motor_dom_sf	InterPro:P-loop_NTPase	PFAM:PF00225	PRINTS:PR00380	PFscan:PS50067
PANTHER:PTHR24115	PANTHER:PTHR24115:SF529	SMART:SM00129	EnsemblPlantsGene:SORBI_3001G177900	SUPFAM:SSF52540	unigene:Sbi.20721
UniParc:UPI0001A82296	RefSeq:XP_002464276.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:14998605..15004589

Molecular Weight (calculated)

124643.0 Da

IEP (calculated)

5.358

GRAVY (calculated)

-0.669

Length

1126 amino acids

Sequence
(BLAST)

0001: MEMLRRNLKR QASRSLSAFA GAASPRAVDQ ENLHPNLASS PPASPAKGAS SPRPKQPAAA APPAATVVED HSTAATTAPA DDEPSVKVVV RVRPTVTRPV
0101: DGKDLWFVRK TAPDSVAVGD RFFPVDGVLE DRASQADAFD LVGLPMIENA LAGFNTSLVC YGQSGTGKTY TMWGPLGAMV DSGSDHADRG VVPRVFQNLF
0201: SRIQRMRESS PDKQTSYQCR CSFLEVHNEQ INDLLEPSQR DLQIKENAGN GIHVENLTDE YVSTVEDINQ ILMKGLSNRK VGTTSMNLKS SRSHVIFTCI
0301: IEAWSKGSSH GFSSSRTSRI TFVDLAGPDT DELDGAAKHS TKEERHLKKS LSRLGKLVNV LSETPESHKV DLPYEQSRLT HVLKDTLGGN SRVIFLCSIS
0401: SEHRCRSGTL STLRFGERAK LMPNKPVINE ISEDDVNGLS DQIRQLKDEL IRTKSGDTTT CKARYFSAQS ARESLHTLRV SLNRSLILPH IEVDSEEEMD
0501: VDEEDVQELR DQISKLHSSS EDTFDDFMDA ESGDENTPCS MGRSGEDDQV IIDDFDGPQQ EEHKEVSNNT NANEELGSDR KSSLSISASP RLSPIQDPTL
0601: CSSPKIHNKA RKSITSPGLS PSKLRVSDSP GDRNVEVCRN SAVRSSLQSS KLSPTDSLAA SLQRGLHIIE YHQQNPAPRK SFIGLSFDHF AVNPRQSTAK
0701: FSTVAQALPE DQGSNLCSSC KKPMDTNENQ AENVNSDKQI VLALGATSNE SASASIKDGS ITKEIASKRE TELEALCEEQ AAKIKELSTL IDQYKNRSED
0801: GPGSNGMAPA EELTSEGMVS EQCHDSKVSL GVSEREALLA EIESLKEQLK NQTIVSTTGS LLDQLRNGST DQEYELDKER QKWMESESKW ISLTEELRVD
0901: LESNRMHAEK TEMELCNEKK CTAELDDALQ RAMYGHARMV EHYVELQELY NDLLEKHRRV MEAISEVKRA AAKAGRKGCG TAFAAALAAE LSTVRIDREK
1001: ERGQLKEQNR RLRIQLRDTA EAVHAAGELL VRLREAEEAS TLEKERTAAL LQENEKLKKQ LEKLRKKHEM ELETMKVHLA ESRLPESALG AFYHHENERT
1101: PEYSCDAPLT HDDDQSWRAA FASAYE

Best Arabidopsis Sequence Match ( AT3G20150.1 )
(BLAST)

0001: MADNRIAGSL PTSSKWSFLP KSVSSHFKPS SNPRSSNPDI ENAPPQNPNI HNPRNQSVSS KSTAYKNQMD SPNCRSQVSA SRPRAISALK TRNEVEEEGA
0101: SNPHVKVVVR IKPTKEYCWK VKKVSKVSYS VRDRHFTFDS VLDSNLNQDD VFQQIGVPLV RDALSGYNTS VLSYGQNGSG KTYTMWGPAG SMLEDPSPKG
0201: EQGLAPRIFQ MLFSEIQREK IKSGGKEVNY QCRCSFLEIY NGQISDLIDQ TQRNLKIKDD AKNGIYVENL TEEYVDSYED VAQILMKGLS SRKVGATSTS
0301: FQSSRSHVIL SFIVESWNKG ASSRCFNTTR TSRINLVDLA GAGTNERDAT KHCVEEEKFL KKSLSELGHV VNSLAENVHP GISDRSLHKT SCLTHLLQES
0401: LGGNSKLTIL CNIFPSDKDT KRTMSTLRFG ERAKAMGNKP MINEISEEDV NDLSDQIRLL KEELSKVKAD ACHSVGSKND YFGAKNARES LNQLRVSLNR
0501: SLMLPKIDND EEEITVDEDD FKELHLQIKS LRGSFNQKLK KFPVNRDSVN SSFVTAFGES ELMDDDEICS EEVEVEENDF GESLEEHDSA ATVCKSSEKS
0601: RIEEFVSENS ISISPCRQSL ILQEPIQSES PKFRDSLRKS IALSSSCLRN QNSLAKSIKS TCFAESQHIR SSLRGSKIFT GSTESLAASL RRGLDIIDNP
0701: MNPASNRCSV SLSSDNLTMQ PPTDDRLPLS PLCPTCRICS SKLPSVVEGD GYHMEGVLEK QQELEKLCSE QAAKIEQLTR LVGQHKLQTE DETEKLMGAS
0801: NGERLPSANE NQLLSCITET YDVKQISDDD SKKTDFDIGE KEALLKEIED LKKKLQTPVT MSTNELRSSL LARSFQLRSK NAEKDIEEER LRCTEMESEW
0901: ISLTDEFRVE IETQRTRAEK AEAQLKQEKL SSEELEDALR RAVLGHARFV EHYTELQEKY NDLCSKHKAT VEWITELKKA VAKAGKKGCG SRFAKSLASE
1001: LSALRVERER ERDLLKKENI SLKIQLRNTA EAVHTAGEVL VRLREAEQSA SAAEEKFNEV EEENEKLKKK MEKLKRRHKL EVVTIKKSLK QNTLPESALQ
1101: PLHQRNSAIE EEGM

Arabidopsis Description

KIN12FKinesin-like protein KIN-12F [Source:UniProtKB/Swiss-Prot;Acc:F4JDI6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.