Factsheet for Os10t0512800-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0785700-01
Os02t0119700-01
Os02t0639900-01
Os03t0201100-01
Os03t0632800-01
Os03t0701100-01
Os03t0741700-00
Os04t0165200-01
Os04t0530600-01
Os07t0571900-01
Os08t0242800-01
Os08t0562300-01
Os11t0148600-01
Os11t0689500-01
Os11t0689650-00
Os12t0146400-01
Os12t0242500-01
Os12t0502300-01
Os12t0566200-01
Os12t0600200-03

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G39050.1	Os03t0701100-01	AT1G03140.1	21798944
AT4G39050.1	Os07t0571900-01	AT1G03140.1	21798944
AT4G39050.1	Os12t0502300-01	AT1G15570.1	21798944
AT4G39050.1	Os01t0785700-01	AT1G55890.1	21798944
AT4G39050.1	Os02t0119700-01	AT2G17670.1	21798944
AT4G39050.1	Os03t0632800-01	AT2G30580.1	21798944
AT4G39050.1	Os03t0741700-00	AT2G30580.1	21798944
AT4G39050.1	Os12t0600200-03	AT2G30580.1	21798944
AT4G39050.1	Os08t0242800-01	AT2G36990.1	21798944
AT4G39050.1	Os02t0639900-01	AT3G15360.1	21798944
AT4G39050.1	Os04t0530600-01	AT3G15360.1	21798944
AT4G39050.1	Os11t0689500-01	AT4G24680.1	21798944
AT4G39050.1	Os11t0689650-00	AT4G24680.1	21798944
AT4G39050.1	Os12t0566200-01	AT4G24680.1	21798944
AT4G39050.1	Os04t0165200-01	AT5G22890.1	21798944
AT4G39050.1	Os08t0562300-01	AT5G22890.1	21798944
AT4G39050.1	Os11t0148600-01	AT5G49210.1	21798944
AT4G39050.1	Os12t0146400-01	AT5G49210.1	21798944
AT4G39050.1	Os12t0242500-01	AT5G63350.1	21798944
AT4G39050.1	Os03t0201100-01	AT5G67530.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G177600.1	Wheat	plastid	86.5	87.99
TraesCS1B01G202600.1	Wheat	plastid	86.31	87.8
TraesCS1D01G176100.1	Wheat	plastid	86.21	87.7
KXG38192	Sorghum	plastid	86.4	87.23
HORVU1Hr1G047110.10	Barley	plastid	82.63	83.73
Zm00001d032464_P008	Maize	plastid	83.85	82.76
Zm00001d013859_P002	Maize	plastid	83.29	82.2
Os06t0206700-01	Rice	cytosol	20.11	66.15
VIT_03s0038g00350.t01	Wine grape	plastid	68.74	66.12
CDY12116	Canola	plastid	64.21	65.83
CDX72718	Canola	plastid	63.17	65.78
CDX90305	Canola	plastid	63.83	65.44
CDY22394	Canola	plastid	63.74	65.09
Solyc10g054080.1.1	Tomato	plastid	65.34	64.98
Solyc11g044880.1.1	Tomato	plastid	65.44	64.95
AT4G39050.1	Thale cress	plastid	64.31	64.55
Bra010714.1-P	Field mustard	plastid	64.02	64.51
AT2G21380.2	Thale cress	plastid	62.61	62.67
CDX82022	Canola	plastid	62.04	61.34
Bra031184.1-P	Field mustard	plastid	62.04	61.29
Solyc01g110190.2.1	Tomato	plastid	58.36	57.81
Os02t0775400-01	Rice	mitochondrion	29.08	56.31
Bra033597.1-P	Field mustard	cytosol	63.93	55.54
GSMUA_Achr8P11730_001	Banana	plastid	68.37	54.85
PGSC0003DMT400008772	Potato	cytosol	24.55	54.28
GSMUA_Achr11P...	Banana	endoplasmic reticulum, plasma membrane	48.82	54.25
Os04t0434600-00	Rice	plasma membrane	42.59	45.15
Os02t0742900-01	Rice	cytosol	9.07	31.58
KRH16381	Soybean	cytosol	19.26	30.77
Os02t0645100-01	Rice	cytosol	17.56	21.04
Os09t0528000-01	Rice	cytosol	16.52	20.3
Os01t0513900-01	Rice	cytosol, plastid	18.22	20.23
Os04t0538800-01	Rice	nucleus	17.66	19.79
Os05t0117798-01	Rice	cytosol	17.94	17.99
Os09t0114500-01	Rice	cytosol	17.56	17.97
Os11t0552600-01	Rice	cytosol, extracellular	5.95	17.12
Os08t0547500-01	Rice	cytosol	16.71	17.07
Os02t0644400-00	Rice	cytosol	9.44	15.87
Os03t0587200-01	Rice	cytosol	14.83	13.91
Os04t0350300-00	Rice	cytosol, plastid	6.99	10.56
Os02t0489800-00	Rice	cytosol	5.57	9.87
Os08t0558400-02	Rice	cytosol	3.31	8.56
Os03t0279816-00	Rice	cytosol, nucleus, plastid	0.47	8.47
Os12t0590500-00	Rice	cytosol	19.74	8.09
Os09t0421200-01	Rice	cytosol, nucleus	2.64	7.87
Os07t0638000-01	Rice	cytosol, nucleus	1.98	5.24
Os02t0742800-01	Rice	plasma membrane	2.27	4.36

Protein Annotations

MapMan:20.1.3.6	Gene3D:3.30.40.10	Gene3D:3.40.850.10	EntrezGene:4349100	ProteinID:AAG13527.1	ProteinID:AAP54589.2
EMBL:AK242756	ProteinID:BAT11636.1	ncoils:Coil	ProteinID:EAZ16667.1	GO:GO:0000166	GO:GO:0000287
GO:GO:0003674	GO:GO:0003774	GO:GO:0003777	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005856
GO:GO:0005871	GO:GO:0005874	GO:GO:0007018	GO:GO:0008017	GO:GO:0008150	GO:GO:0009507
GO:GO:0009536	GO:GO:0009987	GO:GO:0016787	GO:GO:0016887	GO:GO:0042803	GO:GO:0043531
GO:GO:0046872	InterPro:IPR001752	InterPro:IPR001841	InterPro:IPR013083	InterPro:IPR036961	InterPro:Kinesin-like_fam
InterPro:Kinesin_motor_CS	InterPro:Kinesin_motor_dom	InterPro:Kinesin_motor_dom_sf	EnsemblPlantsGene:Os10g0512800	EnsemblPlants:Os10t0512800-01	InterPro:P-loop_NTPase
PFAM:PF00225	PFAM:PF13920	PRINTS:PR00380	ScanProsite:PS00411	PFscan:PS50067	PFscan:PS50089
PANTHER:PTHR24115	PANTHER:PTHR24115:SF497	UniProt:Q9FW70	SMART:SM00129	SUPFAM:SSF52540	SUPFAM:SSF57850
UniParc:UPI0001C7A554	RefSeq:XP_015615027.1	InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD	SEG:seg	:

Description

RING finger protein OsRFPHC-10, RING-HC protein 10, SKIP interacting protein 13, SKIPa-interacting protein 13, SKIPa-interacting protein 13Similar to predicted protein. (Os10t0512800-01)

Coordinates

chr10:-:19756786..19768053

Molecular Weight (calculated)

116823.0 Da

IEP (calculated)

5.862

GRAVY (calculated)

-0.556

Length

1059 amino acids

Sequence
(BLAST)

0001: MSSRPSSSAS SRRSSSPFSA GSRRPPTSSS SSAGSYLTGR LMPRSYSTAS SVSSSSHFFG GGGGSGGGSR STTPGRRGSS SSSLVGPVPS PPSPVPFPSA
0101: EELVIEDTSR SGDSISVTIR FRPLSEREIQ RGDEISWYAD GERLVRCEYN PATAYGYDRV FGPKTTTEAV YDVAARPVVK GAMEGINGTV FAYGVTSSGK
0201: THTMHGDQNC PGIIPLAIKD VFSLIQDTPG REFLLRVSYL EIYNEVINDL LDPTGQNLRV REDAQGTYVE GIKEEVVLSP GHALSFIAAG EEHRHVGSNN
0301: FNLFSSRSHT IFTLMIESSA HGDEYDGVMY SQLNLIDLAG SESSKTETTG LRRREGSYIN KSLLTLGTVI GKLSEGRATH IPYRDSKLTR LLQSSLSGHG
0401: HVSLICTITP ASSNMEETHN TLKFASRAKR VEIYAARNRM IDEKSLIKKY QREISSLKQE LDQLRRGLIG GASQEEIMIL RQQLEEGQVK MQSRLEEEEE
0501: AKAALMSRIQ RLTKLILVST KNNIPALTDT SSHQRHNSVN EEDKVSTSQD SSMLVQNDSA TKDSLSSASP DAVDEINQLR CASGDHSSIA GSGPDEMQGG
0601: ITASDQMDLL IEQVKMLAGE IAFGTSSLKR LIEQSIEDPE GTKNQIDNLE REIREKRRHM RALEQKLMES GEASVANASM MDMQQTITKL TAQCSEKAFE
0701: LELRSADNRV LQEQLQQKNV EINELQEKVL RLEQQLTTNT EASPEQCTEH ELHDLKSKLQ LKEAESEKLK YEHMKITEEN RELVNQNSTL CEEVAYAKEL
0801: ASSAAVELKN LAEEVTKLSV QNAKQAKELL IAQELAHSRV PGRKGRSAGR GRDEVGTWSL DLEDMKMELQ ARKQREAALE AALAEKEHLE EEYKKKFDEA
0901: KKKELSLEND LAGMWVLVAK LKRGALGISD LNVDDRSINL ADITNGTKEN KADKNVAVVE KQLSDNTVKS LTAEEYRNPE FEPLLVRLKA KIQEMKEKET
1001: DSLGDKDGNS HVCKVCFESA TAAVLLPCRH FCLCKPCSLA CSECPLCRTR IADRIITFT

Best Arabidopsis Sequence Match ( AT4G39050.1 )
(BLAST)

0001: MASSSSRTRS SRPPSPASST SSSHLSNRLI PRSNSTSASS LITSAAGIAS RSMTPSRTFS DSGLIGSGSF GIGSPVPYPS EELLGDPMDD TISSERDSIS
0101: VTVRFRPLSD REYQRGDEVA WYPDGDTLVR HEYNPLTAYA FDKVFGPQAT TIDVYDVAAR PVVKAAMEGV NGTVFAYGVT SSGKTHTMHG DQESPGIIPL
0201: AIKDVFSIIQ DTPGREFLLR VSYLEIYNEV INDLLDPTGQ NLRVREDSQG TYVEGIKEEV VLSPGHALSF IAAGEEHRHV GSNNFNLLSS RSHTIFTLMV
0301: ESSATGDEYD GVIFSQLNLI DLAGSESSKT ETTGLRRKEG SYINKSLLTL GTVIGKLSEG KATHIPYRDS KLTRLLQSSL SGHGHVSLIC TITPASSSSE
0401: ETHNTLKFAS RAKSIEIYAS RNQIIDEKSL IKKYQREIST LKLELDQLRR GMLVGVSHEE LMSLKQQLEE GQVKMQSRLE EEEEAKAALM SRIQKLTKLI
0501: LVSTKNSIPG YSGDIPTHQR SLSAGKDDKF DSLLLESDNL GSPSSTLALL SEGSLGFNHR RSSSKLNDEN SPGAEFTQGV MTPDEIDLLV EQVKMLAGEI
0601: AFSTSTLKRL VDQSVNDPEN SQTQIQNLER EIHEKQRQMR GLEQLIIESG EASIANASLV EMQQKVMSLM TQCNEKSFEL EIKSADNCIL QEQLQEKCTE
0701: NKELHEKVNL LEQRLNAVSS EKSSPSCSNK AVSGEYADEL KKKIQSQEIE NEELKLEHVQ IVEENSGLRV QNQKLAEEAS YAKELASAAA VELKNLASEV
0801: TKLSLQNTKL EKELAAARDL AQTRNPMNGV NRKYNDGARS GRKGRISSSR SSGDEFDAWN LDPEDLKMEL QVRKQREVAL ESALAEKEFI EDEYRKKAEE
0901: AKRREEALEN DLANMWVLVA KLKKDNGALP EPNGTDPGRE LEKSQSHAVL KERQVSSAPR QPEVVVVAKT EETPKEEPLV ARLKARMQEM KEKEMKSQAN
1001: GDANSHICKV CFESPTAAIL LPCRHFCLCK SCSLACSECP ICRTKISDRL FAFPS

Arabidopsis Description

KIN7DKinesin-like protein KIN-7D, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8W5R5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.