Skip to main content
crop-pal logo
Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 2
  • cytosol 3
  • mitochondrion 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, mitochondrion, nucleus, secretory
BaCelLo:nucleus
EpiLoc:cytosol
iPSORT:mitochondrion
MultiLoc:cytosol
Predotar:secretory
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
plasma membrane: 18260611
msms PMID: 18260611 doi
SH Natera, KL Ford, AM Cassin, JH Patterson, EJ Newbigin, A Bacic
Plant Cell Biology Research Centre, VIC, Australia. s.natera@unimelb.edu.au
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU2Hr1G076000.48 Barley cytosol 83.08 77.79
TraesCS2B01G322300.2 Wheat cytosol, plastid 83.68 72.63
TraesCS2A01G305500.2 Wheat plastid 83.48 72.46
TraesCS2D01G304000.1 Wheat plastid 83.38 72.37
EES12188 Sorghum plastid 83.48 72.08
Zm00001d003644_P002 Maize extracellular 82.68 71.64
GSMUA_Achr11P... Banana endoplasmic reticulum 54.05 63.16
Os06t0206700-01 Rice cytosol 19.52 60.56
AT1G21730.1 Thale cress plastid 51.05 57.3
VIT_18s0001g02380.t01 Wine grape plastid 64.06 56.54
CDY04671 Canola plastid 50.45 56.12
CDY08179 Canola plastid 50.35 56.01
Bra017946.1-P Field mustard plastid 50.05 55.99
KRH17972 Soybean plastid 62.86 55.67
Solyc06g060140.2.1 Tomato plastid 61.46 53.95
Os02t0775400-01 Rice mitochondrion 29.03 53.02
Os10t0512800-01 Rice plastid 45.15 42.59
Os02t0742900-01 Rice cytosol 7.91 25.99
Os02t0645100-01 Rice cytosol 17.02 19.23
Os09t0528000-01 Rice cytosol 16.42 19.03
Os04t0538800-01 Rice nucleus 17.32 18.31
Os01t0513900-01 Rice cytosol, plastid 17.32 18.13
Os05t0117798-01 Rice cytosol 18.02 17.05
Os09t0114500-01 Rice cytosol 17.12 16.52
Os08t0547500-01 Rice cytosol 17.12 16.49
Os02t0644400-00 Rice cytosol 10.21 16.19
Os11t0552600-01 Rice cytosol, extracellular 5.71 15.49
Os04t0350300-00 Rice cytosol, plastid 8.51 12.13
Os03t0587200-01 Rice cytosol 13.21 11.69
Os02t0489800-00 Rice cytosol 5.51 9.2
Os12t0590500-00 Rice cytosol 20.32 7.86
Os09t0421200-01 Rice cytosol, nucleus 2.3 6.46
Os08t0558400-02 Rice cytosol 2.4 5.87
Os03t0279816-00 Rice cytosol, nucleus, plastid 0.3 5.08
Os02t0742800-01 Rice plasma membrane 2.3 4.17
Os07t0638000-01 Rice cytosol, nucleus 1.0 2.49
Protein Annotations
MapMan:20.1.3.6Gene3D:3.40.850.10ncoils:CoilGO:GO:0000166GO:GO:0003674GO:GO:0003774
GO:GO:0003777GO:GO:0003824GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005856GO:GO:0005874GO:GO:0005886
GO:GO:0007018GO:GO:0008017GO:GO:0008150GO:GO:0009507GO:GO:0009536GO:GO:0009987
GO:GO:0016020GO:GO:0016787InterPro:IPR001752InterPro:IPR036961InterPro:Kinesin-like_famInterPro:Kinesin_motor_CS
InterPro:Kinesin_motor_domInterPro:Kinesin_motor_dom_sfEnsemblPlantsGene:Os04g0434600EnsemblPlants:Os04t0434600-00InterPro:P-loop_NTPasePFAM:PF00225
PRINTS:PR00380ScanProsite:PS00411PFscan:PS50067PANTHER:PTHR24115PANTHER:PTHR24115:SF70SMART:SM00129
SUPFAM:SSF52540SignalP:SignalP-noTMUniParc:UPI0003938715SEG:seg::
Description
Similar to OSIGBa0102D10.3 protein. (Os04t0434600-00)
Coordinates
chr4:-:21609873..21620083
Molecular Weight (calculated)
111402.0 Da
IEP (calculated)
5.587
GRAVY (calculated)
-0.632
Length
999 amino acids
Sequence
(BLAST)
001: MGVPWALLGF WSSRCLRVSW CSPREINKGD EVAWYANGDN MVRNEYNPSI AYAFDKVFGP ATTTRHVYDI AAQHVVSGAM EGINGTVFAY GVTSSGKTHT
101: MHGEQKSPGI IPLAVKDVFS IIQDTPGREF LLRVSYLEIY NEVINDLLDP IGQNLRIRED AQGTYVEGIK EEVVLSPAHA LSLIASGEDS NTTQTIESSP
201: SGENDEGEVK LSQLNLIDLA GSESSKTETT GLRRKEGSYI NKSLLTLGTV IAKLTDGKAT HIPYRDSKLT RLLQSSLSGH GRISLICTVT PASSNSEETH
301: NTLKFAHRSK HIEIKASQNK IIDEKSLIKK YQKEITCLKE ELQQLRRGMM GNGYIPPTDQ EDLVSLKLQL EAGQVKLQSR LEEEEEAKAA LMGRIQRLTK
401: LILVSTKSSI SSNVSGKASL RRRHSFGEDE LAYLPDRKRE YSMEDDDVSL DSEFSVEGKL DSNNPDESLR FDRRNRRRGM LGWFKLKKSD QLSGLSTSVD
501: SESTASGSPS FSRSSQQKHP LLDLKDGRRK SMTRKGDDPA LTDSFPGRTQ AGDLFSAASR ARHHLPSGTT IVDQIDLLQE QVKMLAGEVA LCTSSLKRLS
601: EQAANNPDDS QIQEQIEKLK NEIDEKKSHI RVLEQRMAQS LETTEDPAIR TEMSQTFSKL STQLSEKTFE LEVSENAELV ETVAQLRQEI DNLLKTAKNE
701: DNVASMQSSE PSSTSSNPRD LANEVASHSK MPSRTTEDHT ESPLKSQVLL QAAEIENLKL DKLRLAEEKD GLEIHSQKLA EESSYAKELA AAAAVELKNL
801: AEEVTRLSYE NAKLNADLAA AKDQTRSSIQ SDTKRRDQEN GIFVEELQKE LVASCQREAV LEDTLSQRAR REKLKKENSQ EDLFQFKATQ NGYHSSKSDT
901: GRMMSGMEAS DNRNWDGVSV STYEEAKAAY NVQRRRCKEL EGIVSRLKGE DLRGLDVKVL EELQNFHVEA LSKICQEKYL SAPAWLIFIY ASQMANQVL
Best Arabidopsis Sequence Match ( AT1G21730.1 )
(BLAST)
001: MSATRSQRSS TISPARPRRS PATIPMKRPE TPSSSHFSAS PVTSSSPLLR SSPSPSTSSA AASSTAVAST KLKENITVTI RFRPLSPREV NNGDEIAWYA
101: DGDYTIRNEY NPSLCYGFDR VFGPPTTTRR VYDIAAQQVV SGAMSGINGT VFAYGVTSSG KTHTMHGEQR SPGIIPLAVK DVFSIIQETP EREFLLRVSY
201: LEIYNEVIND LLDPTGQNLR IREDSQGTYV EGIKDEVVLS PAHALSLIAS GEEHRHVGSN NVNLFSSRSH TMFTLTIESS PHGKGDDGED VSLSQLHLID
301: LAGSESSKTE ITGQRRKEGS SINKSLLTLG TVISKLTDTK AAHIPYRDSK LTRLLQSTLS GHGRVSLICT ITPASSTSEE THNTLKFAQR CKHVEIKASR
401: NKIMDEKSLI KKYQKEISCL QEELTQLRHG NQDDLADRKL QVKLQSRLED DEEAKAALMG RIQRLTKLIL VSTKSSLQAA SVKPDHIWRQ AFGEDELAYL
501: PDRRRENMAD DGAVSTVSEH LKEPRDGNSS LDEMTKDRRK NKTRGMLGWL KLKKSDGVAG TLPTDGNQSQ ASGSPSSSSK YTQTKTTRRE NAAAIKSIPE
601: KTVAGDLFSA TVGPEDSSPT GTTIADQMDL LHEQTKILVG EVALRTSSLN RLSEQAARNP EDFHIRDQIQ KLEDEISEKK DQIRVLEQQI IEIFGMTPYA
701: SDSLGMPQVL SKLTMQLNEK IFEHEIKSAD NRILQEQLQM TKSENAEMQE TIILLRQQLD SLAERQSTQQ IAGDESSGKN IHNRNGEESE IYSGAGTPTS
801: VMSLNRVFAQ EETKEIYNET ALNSQALEIE NLKKEKMRLI EEKDELGKLN KKLTEEASYA KELASAAAVE LQNLAEEVTR LCNENAKLSR
Arabidopsis Description
KIN7CKinesin-like protein KIN-7C, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8W5R6]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.