Factsheet for Os03t0201100-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Os04t0654700-02

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G67530.1	Os04t0654700-02	AT1G22920.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER92686	Sorghum	cytosol	86.58	21.83
TraesCS4B01G260100.1	Wheat	cytosol	85.91	21.69
TraesCS4A01G045200.1	Wheat	cytosol	85.91	21.69
TraesCS4D01G259800.1	Wheat	cytosol	85.91	21.66
HORVU4Hr1G070330.9	Barley	cytosol	85.23	21.53
Bra024442.1-P	Field mustard	cytosol	79.87	19.93
CDY08725	Canola	cytosol	79.87	19.93
CDY36499	Canola	cytosol	79.19	19.77
VIT_07s0129g00040.t01	Wine grape	cytosol	79.19	19.77
AT5G67530.1	Thale cress	cytosol	78.52	19.66
Zm00001d028109_P006	Maize	cytosol	86.58	19.4
GSMUA_Achr1P22460_001	Banana	cytosol	77.18	19.33
KRH77127	Soybean	nucleus	76.51	19.1
KRH28354	Soybean	nucleus	76.51	19.1
Solyc02g092380.2.1	Tomato	nucleus	73.83	18.46
PGSC0003DMT400055240	Potato	cytosol	73.15	18.29
Os08t0557500-01	Rice	cytosol	16.11	4.77
Os06t0130500-01	Rice	cytosol	2.68	2.5
Os07t0476500-01	Rice	mitochondrion	2.68	1.7
Os01t0582400-01	Rice	extracellular	3.36	1.0
Os06t0670400-00	Rice	cytosol	2.68	0.85
Os06t0670500-01	Rice	cytosol	2.68	0.71
Os08t0559400-01	Rice	cytosol, nucleus	0.67	0.61
VIT_00s0513g00020.t01	Wine grape	cytosol	0.67	0.3

Protein Annotations

Gene3D:3.30.40.10	MapMan:35.1	UniProt:A0A0P0VUB1	ProteinID:BAS82820.1	GO:GO:0000413	GO:GO:0003674
GO:GO:0003755	GO:GO:0003824	GO:GO:0004842	GO:GO:0006457	GO:GO:0006464	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016567	GO:GO:0016740	GO:GO:0016853	GO:GO:0019538
InterPro:IPR003613	InterPro:IPR013083	EnsemblPlantsGene:Os03g0201100	EnsemblPlants:Os03t0201100-01	PFscan:PS51698	SMART:SM00504
SUPFAM:SSF57850	UniParc:UPI0003939678	InterPro:Ubox_domain	InterPro:Znf_RING/FYVE/PHD	:	:

Description

CYCLOPHILIN 65Similar to Cyclophilin-like protein PPIL3b. (Os03t0201100-01)

Coordinates

chr3:-:5297336..5301348

Molecular Weight (calculated)

16937.4 Da

IEP (calculated)

8.491

GRAVY (calculated)

-0.381

Length

149 amino acids

Sequence
(BLAST)

001: MGKKQHSKDR MFITRTEWAT EWGGAKQKEA GTPFKRLPFY CCALTFLPFE DPVCTADGSV FDLMSIIPYI KKFGKHPVTG TPLKQEDLMP LTFHKNSDGE
101: FQCPVLNKVF TEFTHIVAVK TTGNVFCYEV GFGNPRTQHQ AKELERIAN

Best Arabidopsis Sequence Match ( AT5G67530.1 )
(BLAST)

001: MGKKQHSKDR MFITKTEWAT EWGGAKSKEN RTPFKSLPYY CCALTFLPFE DPVCTIDGSV FEITTIVPYI RKFGKHPVTG APLKGEDLIP LIFHKNSEGE
101: YHCPVLNKVF TEFTHIVAVK TTGNVFCYEA IKELNIKTKN WKELLTEEPF TRADLITIQN PNAVDGKVTV EFDHVKNGLK IDDEELKKMN SDPAYNINVS
201: GDIKHMLADL GTDKAKEIAL HGGGGNKARN ERAAAIAAIL ESRSKIKEVS KAEQPKQTYS VVDAASASVF GRSADAAKAG SSDKTAARIA MHMAGDRTPV
301: NSKMVKSRYS SGAASRSFTS SAFTPVTKND FELIKVEKNP KKKGYVQFQT THGDLNIELH CDIAPRACEN FITLCERGYY NGVAFHRSIR NFMIQGGDPT
401: GTGKGGESIW GKPFKDEPNS KLLHSGRGVV SMANSGPHTN GSQFFVLYKS ATHLNYKHTV FGGVVGGLAT LAAMENVPVD ESDRPLEEIK IIEASVFVNP
501: YTELDEEEEK EKAEKEKNED KDIEKIGSWY SNPGSGTTEA GAGGGGVGKY LKAMSSTATK DTKGSLDSDI STIGVSKKRK TTASASTGFK DFSSW

Arabidopsis Description

CYP65Peptidyl-prolyl cis-trans isomerase CYP65 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJX0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.