Factsheet for Os06t0130500-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 4
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytoskeleton, cytosol, mitochondrion, secretory
BaCelLo:	secretory
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER87777	Sorghum	cytosol	96.88	96.88
Zm00001d036035_P001	Maize	cytosol	94.38	94.38
TraesCS7A01G066500.1	Wheat	cytosol	90.0	90.0
TraesCS4A01G423000.1	Wheat	cytosol	90.0	90.0
Bra032657.1-P	Field mustard	cytosol	89.38	89.38
VIT_15s0048g01780.t01	Wine grape	cytosol	89.38	89.38
TraesCS7D01G060700.1	Wheat	cytosol	89.38	89.38
Solyc08g006090.2.1	Tomato	cytosol, nucleus	89.38	89.38
AT1G01940.1	Thale cress	cytosol	89.38	89.38
PGSC0003DMT400038471	Potato	cytosol	88.75	88.75
KRH76297	Soybean	cytosol	90.0	87.27
CDY38037	Canola	mitochondrion, plastid	88.75	73.58
Os08t0559400-01	Rice	cytosol, nucleus	48.75	47.56
Os07t0476500-01	Rice	mitochondrion	28.75	19.57
Os01t0582400-01	Rice	extracellular	43.12	13.83
Os06t0670400-00	Rice	cytosol	38.75	13.22
Os06t0670500-01	Rice	cytosol	40.62	11.52
Os03t0201100-01	Rice	cytosol	2.5	2.68
Os08t0557500-01	Rice	cytosol	1.88	0.6

Protein Annotations

MapMan:18.12.1	Gene3D:2.40.100.10	EntrezGene:4340003	EMBL:AK105360	ProteinID:BAA84791.1	ProteinID:BAF18604.1
ProteinID:BAS95975.1	InterPro:Cyclophilin-like_dom_sf	InterPro:Cyclophilin-type_PPIase	InterPro:Cyclophilin-type_PPIase_CS	InterPro:Cyclophilin-type_PPIase_dom	ProteinID:EAZ35707.1
GO:GO:0000209	GO:GO:0000413	GO:GO:0003674	GO:GO:0003755	GO:GO:0003824	GO:GO:0004842
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006457	GO:GO:0006464
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016567	GO:GO:0016740	GO:GO:0016853
GO:GO:0019538	GO:GO:0034450	InterPro:IPR002130	InterPro:IPR029000	EnsemblPlantsGene:Os06g0130500	EnsemblPlants:Os06t0130500-01
PFAM:PF00160	PIRSF:PIRSF001467	PRINTS:PR00153	ScanProsite:PS00170	PFscan:PS50072	PANTHER:PTHR11071
PANTHER:PTHR11071:SF147	UniProt:Q9SNN7	SUPFAM:SSF50891	UniParc:UPI00000A0DEE	RefSeq:XP_015641711.1	SEG:seg

Description

CYCLOPHILIN 18-1Similar to Cyclophilin-like protein PPIL3b. (Os06t0130500-01)

Coordinates

chr6:+:1635098..1635912

Molecular Weight (calculated)

17517.9 Da

IEP (calculated)

8.494

GRAVY (calculated)

-0.328

Length

160 amino acids

Sequence
(BLAST)

001: MSVTLHTNLG DIKCEVFCDQ APRTAENFLA LCASGYYDGT IFHRNIKGFM IQGGDPTGTG KGGTSIWGKK FADEFRESLK HNARGVMSMA NSGPNTNGSQ
101: FFITYAKQPH LNGHYTVFAK VIHGFEVLDL MEKAQTGPGD RPLAEIRLNR VTIHANPLAN

Best Arabidopsis Sequence Match ( AT1G01940.1 )
(BLAST)

001: MSVTLHTNLG DIKCEIFCDE VPKSAENFLA LCASGYYDGT IFHRNIKGFM IQGGDPKGTG KGGTSIWGKK FNDEIRDSLK HNARGMLSMA NSGPNTNGSQ
101: FFITYAKQPH LNGLYTIFGK VIHGFEVLDI MEKTQTGPGD RPLAEIRLNR VTIHANPLAG

Arabidopsis Description

CYP18-1Peptidyl-prolyl cis-trans isomerase CYP18-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPC7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.