Factsheet for Os06t0670400-00

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytoskeleton, cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol, nucleus
PProwler:	secretory
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0155600-01
Os01t0316600-01
Os03t0285900-01
Os03t0344100-02
Os03t0374575-01
Os04t0118900-01
Os05t0120100-01
Os05t0151000-00
Os05t0162600-01
Os05t0364600-01
Os07t0623300-01
Os07t0633200-02
Os07t0673500-01
Os09t0520700-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G53720.1	Os01t0316600-01	AT1G09140.1	16497658
AT1G53720.1	Os03t0344100-02	AT1G09140.1	16497658
AT1G53720.1	Os05t0364600-01	AT1G09140.1	16497658
AT1G53720.1	Os07t0673500-01	AT1G09140.1	16497658
AT1G53720.1	Os01t0155600-01	AT2G37340.1	16497658
AT1G53720.1	Os03t0285900-01	AT2G37340.1	16497658
AT1G53720.1	Os05t0120100-01	AT2G37340.1	16497658
AT1G53720.1	Os05t0162600-01	AT2G37340.1	16497658
AT1G53720.1	Os03t0374575-01	AT3G13570.1	16497658
AT1G53720.1	Os07t0633200-02	AT3G13570.1	16497658
AT1G53720.1	Os04t0118900-01	AT3G61860.1	16497658
AT1G53720.1	Os05t0151000-00	AT4G35800.1	16497658
AT1G53720.1	Os09t0520700-01	AT5G62190.1	16497658
AT1G53720.1	Os07t0623300-01	AT5G64200.2	16497658

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G042040.1	Barley	endoplasmic reticulum	31.98	72.82
Os06t0670500-01	Rice	cytosol	86.57	71.99
HORVU1Hr1G040970.1	Barley	cytosol, endoplasmic reticulum, mitochondrion	36.67	71.37
HORVU1Hr1G015670.5	Barley	cytosol	36.46	70.66
Zm00001d036620_P001	Maize	nucleus	66.74	70.02
EER88795	Sorghum	cytosol	74.84	62.79
TraesCS7A01G469800.1	Wheat	nucleus	74.63	62.61
HORVU7Hr1G107520.5	Barley	nucleus	74.63	62.61
TraesCS7B01G371900.1	Wheat	nucleus	74.2	62.25
TraesCS7D01G457200.1	Wheat	nucleus	74.2	62.25
PGSC0003DMT400056014	Potato	cytosol	23.88	62.22
TraesCS3D01G065600.1	Wheat	cytosol	43.5	61.08
TraesCS4D01G241400.1	Wheat	nucleus	62.05	60.5
TraesCS4A01G064400.1	Wheat	nucleus	61.41	60.25
TraesCS4B01G241800.1	Wheat	nucleus	59.7	60.09
TraesCS3A01G064900.1	Wheat	cytosol	49.47	57.28
GSMUA_Achr10P...	Banana	cytosol	61.19	51.81
AT1G53720.1	Thale cress	nucleus	51.81	48.02
PGSC0003DMT400011164	Potato	cytosol	18.76	47.57
PGSC0003DMT400069100	Potato	cytosol	34.54	47.23
CDY72459	Canola	cytosol, extracellular, plastid	11.3	45.3
Bra030819.1-P	Field mustard	cytosol	52.24	45.04
PGSC0003DMT400011166	Potato	nucleus	27.93	44.86
Solyc07g066420.2.1	Tomato	nucleus	55.86	44.63
KRH13056	Soybean	nucleus	57.78	42.81
KRG93223	Soybean	nucleus	57.57	42.19
Os08t0559400-01	Rice	cytosol, nucleus	14.5	41.46
VIT_19s0027g01660.t01	Wine grape	nucleus	56.08	41.22
Os06t0130500-01	Rice	cytosol	13.22	38.75
CDY10512	Canola	nucleus	52.45	24.8
Os01t0582400-01	Rice	extracellular	20.26	19.04
Os07t0476500-01	Rice	mitochondrion	8.74	17.45
Os03t0201100-01	Rice	cytosol	0.85	2.68
Os08t0557500-01	Rice	cytosol	0.43	0.4

Protein Annotations

MapMan:18.12.1	Gene3D:2.40.100.10	Gene3D:3.30.70.330	UniProt:A0A0P0WZZ1	ProteinID:BAS99070.1	InterPro:CRIP
InterPro:Cyclophilin-like_dom_sf	InterPro:Cyclophilin-type_PPIase	InterPro:Cyclophilin-type_PPIase_dom	InterPro:Cyclophilin_PPIL4	GO:GO:0000413	GO:GO:0003674
GO:GO:0003676	GO:GO:0003723	GO:GO:0003755	GO:GO:0003824	GO:GO:0005488	GO:GO:0006139
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016853
GO:GO:0019538	GO:GO:1901407	InterPro:IPR000504	InterPro:IPR002130	InterPro:IPR012677	InterPro:IPR029000
InterPro:Nucleotide-bd_a/b_plait_sf	EnsemblPlantsGene:Os06g0670400	EnsemblPlants:Os06t0670400-00	PFAM:PF00076	PFAM:PF00160	PRINTS:PR00153
PFscan:PS50072	PFscan:PS50102	PANTHER:PTHR11071	PANTHER:PTHR11071:SF156	InterPro:RBD_domain_sf	InterPro:RRM_dom
SUPFAM:SSF50891	SUPFAM:SSF54928	UniParc:UPI000393B1D1	SEG:seg	:	:

Description

CYCLOPHILIN 59ASimilar to CYP59 (CYCLOPHILIN 59); RNA binding / nucleic acid binding / peptidyl-prolyl cis-trans isomerase. (Os06t0670400-00)

Coordinates

chr6:+:27782932..27791010

Molecular Weight (calculated)

53867.1 Da

IEP (calculated)

5.329

GRAVY (calculated)

-1.059

Length

469 amino acids

Sequence
(BLAST)

001: MSVLIVTSVG DIEVDLHTDM CPLTTKNFLK LCKMKYYNGC LFHKIEKDFL AQTGDSTGTG AGGDSVYKFL YGDQARFFDD EIHPELRHSK MGTIAMASAG
101: ENCNASQFYI TLRDGVDYLD DKHTVFGMVA EGFDTITKIN ETYVDDKGRP FKDIRIRHTY VLDDPFDDPP QLSKLIPENS PVGKPQDEIA EERLEDNWVP
201: PDETVAPEEL EDTIRSKEAH TNAVILQSLG DIPDAEIKPQ DNVLFVRELN KDEDLYTIFS HFGSVTSAEI IRDYKTGDSL CFAFIDGCFK CGALDLIARD
301: CDQRAEQKNK GPNYILKDEN TQRSGNKRRS YDLVFEDGEN YNGQQDLRSA DRRKIHKIDD RRSGLPPRGD RDRISRERTH IDENDKEGNR DRGNQKHEDY
401: NRYCKPGERS SSRHDDRGYS KHESRSKYRD GDDDYRRQSG GSRYGRDKCD GERRYRGDDD HGRSNRHTR

Best Arabidopsis Sequence Match ( AT1G53720.1 )
(BLAST)

001: MSVLIVTSLG DIVIDLHSDK CPLTCKNFLK LCKIKYYNGC LFHTVQKDFT AQTGDPTGTG AGGDSIYKFL YGEQARFYKD EIHLDLKHSK TGTVAMASGG
101: ENLNASQFYF TLRDDLDYLD GKHTVFGQIA EGFDTLTRIN EAYVDPKNRP YKNIRIKHTH ILDDPFDDPP QLAEMMPDAS PEGKPKEEVK DDVRLEDDWV
201: PMDEELGAQE LEEVIREKAA HSSAVVLESI GDIPEAEVKP PDNVLFVCKL NPVTEDEDLH TIFSRFGTVV SADVIRDFKT GDSLCYAFIE FENKESCEQA
301: YFKMDNALID DRRIHVDFSQ SVSKLWSQFR QKDSQKGKGN GCFKCGSTDH IAKDCVGGPS SKFIVKDQNR QHGGGEGYEM VFEGDVHETP KHNSHERERS
401: EKIQRRSPHG NGEGKRQHRD ERDDGRRQHD REDARELERK HRERKERESR EDEDRRRRRR REESRDKESR RERDEDDHRS HRDYKERRRE RDDRHGREAR
501: HERRDR

Arabidopsis Description

CYP59Peptidyl-prolyl cis-trans isomerase CYP59 [Source:UniProtKB/Swiss-Prot;Acc:Q6Q151]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.