Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G065600.1 | Wheat | cytosol | 72.35 | 87.72 |
| Zm00001d036620_P001 | Maize | nucleus | 63.21 | 57.27 |
| TraesCS4A01G064400.1 | Wheat | nucleus | 63.21 | 53.56 |
| PGSC0003DMT400011164 | Potato | cytosol | 24.44 | 53.51 |
| PGSC0003DMT400056014 | Potato | cytosol | 23.46 | 52.78 |
| EER88795 | Sorghum | cytosol | 70.62 | 51.16 |
| Os06t0670500-01 | Rice | cytosol | 70.12 | 50.35 |
| Os06t0670400-00 | Rice | cytosol | 57.28 | 49.47 |
| TraesCS7A01G469800.1 | Wheat | nucleus | 68.15 | 49.37 |
| PGSC0003DMT400011166 | Potato | nucleus | 35.06 | 48.63 |
| PGSC0003DMT400069100 | Potato | cytosol | 39.26 | 46.36 |
| AT1G53720.1 | Thale cress | nucleus | 57.78 | 46.25 |
| GSMUA_Achr10P... | Banana | cytosol | 62.22 | 45.49 |
| CDY72459 | Canola | cytosol, extracellular, plastid | 13.09 | 45.3 |
| Bra030819.1-P | Field mustard | cytosol | 56.54 | 42.1 |
| Solyc07g066420.2.1 | Tomato | nucleus | 57.78 | 39.86 |
| TraesCS4A01G423000.1 | Wheat | cytosol | 15.56 | 39.38 |
| TraesCS7A01G066500.1 | Wheat | cytosol | 15.56 | 39.38 |
| TraesCS7A01G279300.1 | Wheat | cytosol, nucleus | 15.31 | 37.8 |
| VIT_19s0027g01660.t01 | Wine grape | nucleus | 59.26 | 37.62 |
| KRH13056 | Soybean | nucleus | 57.78 | 36.97 |
| KRG93223 | Soybean | nucleus | 58.02 | 36.72 |
| CDY10512 | Canola | nucleus | 56.05 | 22.88 |
| TraesCS3A01G209000.1 | Wheat | nucleus | 23.21 | 18.99 |
| TraesCS4A01G045200.1 | Wheat | cytosol | 17.78 | 12.2 |
| TraesCS7A01G277700.1 | Wheat | cytosol | 15.31 | 9.57 |
Protein Annotations
| MapMan:18.12.1 | Gene3D:2.40.100.10 | Gene3D:3.30.70.330 | InterPro:CRIP | InterPro:Cyclophilin-like_dom_sf | InterPro:Cyclophilin-type_PPIase |
| InterPro:Cyclophilin-type_PPIase_dom | InterPro:Cyclophilin_PPIL4 | GO:GO:0000413 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003755 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0019538 | InterPro:IPR000504 | InterPro:IPR002130 | InterPro:IPR012677 | InterPro:IPR029000 | InterPro:Nucleotide-bd_a/b_plait_sf |
| PFAM:PF00076 | PFAM:PF00160 | PRINTS:PR00153 | PFscan:PS50072 | PFscan:PS50102 | PANTHER:PTHR11071 |
| PANTHER:PTHR11071:SF156 | InterPro:RBD_domain_sf | InterPro:RRM_dom | SMART:SM00360 | SUPFAM:SSF50891 | SUPFAM:SSF54928 |
| EnsemblPlantsGene:TraesCS3A01G064900 | EnsemblPlants:TraesCS3A01G064900.1 | TIGR:cd01921 | TIGR:cd12235 | SEG:seg | : |
Description
No Description!
Coordinates
chr3A:+:38316443..38317941
Molecular Weight (calculated)
45043.4 Da
IEP (calculated)
4.509
GRAVY (calculated)
-0.590
Length
405 amino acids
Sequence
(BLAST)
(BLAST)
001: MSVLIVTSVG DIDVDLHTEE CPITTKNFLK LCKIKYYNGC LFHKVERDFL AQTGDPTGTG TGGHSVYKIL HGDQDRFFDD EIRPDLRHSN AGTVAMAGGS
101: QFYFTLRDGV DGLDGKHTVF GMIAEGESFD TLAKINESCL DDKGRPFMDI RIKHTYVLDD PFDEPPRLAE LIPGNSPVGK PRDETAEERS QVPFDETVDC
201: SEDALSNNVV IVSCDHCGGG IPGVEQPDNV LYVSKLNPIT QDEDLHTIFS RFGTVTSAEI IRECKTGDSL CYAFIEFETK EDCERAYFKM ENSLIHDRRI
301: QVDFAQNVPK LWGRFRQSKL NADKDDGCLL KCGAPDHLPR DCDQGVEEEN KGTNYVVKDQ NTHGGGNNRR SYDLAFDDEG NNADLEDHPG ADRNKILKVE
401: ASPSG
101: QFYFTLRDGV DGLDGKHTVF GMIAEGESFD TLAKINESCL DDKGRPFMDI RIKHTYVLDD PFDEPPRLAE LIPGNSPVGK PRDETAEERS QVPFDETVDC
201: SEDALSNNVV IVSCDHCGGG IPGVEQPDNV LYVSKLNPIT QDEDLHTIFS RFGTVTSAEI IRECKTGDSL CYAFIEFETK EDCERAYFKM ENSLIHDRRI
301: QVDFAQNVPK LWGRFRQSKL NADKDDGCLL KCGAPDHLPR DCDQGVEEEN KGTNYVVKDQ NTHGGGNNRR SYDLAFDDEG NNADLEDHPG ADRNKILKVE
401: ASPSG
001: MSVLIVTSLG DIVIDLHSDK CPLTCKNFLK LCKIKYYNGC LFHTVQKDFT AQTGDPTGTG AGGDSIYKFL YGEQARFYKD EIHLDLKHSK TGTVAMASGG
101: ENLNASQFYF TLRDDLDYLD GKHTVFGQIA EGFDTLTRIN EAYVDPKNRP YKNIRIKHTH ILDDPFDDPP QLAEMMPDAS PEGKPKEEVK DDVRLEDDWV
201: PMDEELGAQE LEEVIREKAA HSSAVVLESI GDIPEAEVKP PDNVLFVCKL NPVTEDEDLH TIFSRFGTVV SADVIRDFKT GDSLCYAFIE FENKESCEQA
301: YFKMDNALID DRRIHVDFSQ SVSKLWSQFR QKDSQKGKGN GCFKCGSTDH IAKDCVGGPS SKFIVKDQNR QHGGGEGYEM VFEGDVHETP KHNSHERERS
401: EKIQRRSPHG NGEGKRQHRD ERDDGRRQHD REDARELERK HRERKERESR EDEDRRRRRR REESRDKESR RERDEDDHRS HRDYKERRRE RDDRHGREAR
501: HERRDR
101: ENLNASQFYF TLRDDLDYLD GKHTVFGQIA EGFDTLTRIN EAYVDPKNRP YKNIRIKHTH ILDDPFDDPP QLAEMMPDAS PEGKPKEEVK DDVRLEDDWV
201: PMDEELGAQE LEEVIREKAA HSSAVVLESI GDIPEAEVKP PDNVLFVCKL NPVTEDEDLH TIFSRFGTVV SADVIRDFKT GDSLCYAFIE FENKESCEQA
301: YFKMDNALID DRRIHVDFSQ SVSKLWSQFR QKDSQKGKGN GCFKCGSTDH IAKDCVGGPS SKFIVKDQNR QHGGGEGYEM VFEGDVHETP KHNSHERERS
401: EKIQRRSPHG NGEGKRQHRD ERDDGRRQHD REDARELERK HRERKERESR EDEDRRRRRR REESRDKESR RERDEDDHRS HRDYKERRRE RDDRHGREAR
501: HERRDR
Arabidopsis Description
CYP59Peptidyl-prolyl cis-trans isomerase CYP59 [Source:UniProtKB/Swiss-Prot;Acc:Q6Q151]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.