Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G064900.1 | Wheat | cytosol | 87.72 | 72.35 |
| Zm00001d036620_P001 | Maize | nucleus | 67.66 | 50.56 |
| PGSC0003DMT400011164 | Potato | cytosol | 26.65 | 48.11 |
| TraesCS4D01G241400.1 | Wheat | nucleus | 68.26 | 47.4 |
| EER88795 | Sorghum | cytosol | 76.35 | 45.62 |
| Os06t0670500-01 | Rice | cytosol | 75.75 | 44.86 |
| PGSC0003DMT400056014 | Potato | cytosol | 23.95 | 44.44 |
| TraesCS7D01G457200.1 | Wheat | nucleus | 73.95 | 44.19 |
| CDY72459 | Canola | cytosol, extracellular, plastid | 15.27 | 43.59 |
| Os06t0670400-00 | Rice | cytosol | 61.08 | 43.5 |
| AT1G53720.1 | Thale cress | nucleus | 62.87 | 41.5 |
| PGSC0003DMT400011166 | Potato | nucleus | 35.63 | 40.75 |
| PGSC0003DMT400069100 | Potato | cytosol | 41.62 | 40.52 |
| GSMUA_Achr10P... | Banana | cytosol | 66.47 | 40.07 |
| Bra030819.1-P | Field mustard | cytosol | 61.38 | 37.68 |
| Solyc07g066420.2.1 | Tomato | nucleus | 63.47 | 36.12 |
| TraesCS7D01G060700.1 | Wheat | cytosol | 17.07 | 35.62 |
| VIT_19s0027g01660.t01 | Wine grape | nucleus | 64.67 | 33.86 |
| KRH13056 | Soybean | nucleus | 62.28 | 32.86 |
| KRG93223 | Soybean | nucleus | 62.57 | 32.66 |
| TraesCS7D01G279100.1 | Wheat | cytosol | 15.27 | 31.1 |
| CDY10512 | Canola | nucleus | 60.78 | 20.46 |
| TraesCS3D01G211900.1 | Wheat | nucleus | 24.55 | 16.43 |
| TraesCS2D01G237600.1 | Wheat | mitochondrion | 8.08 | 11.59 |
| TraesCS4D01G259800.1 | Wheat | cytosol | 18.26 | 10.32 |
| TraesCS7D01G277600.1 | Wheat | nucleus | 15.87 | 8.18 |
Protein Annotations
| MapMan:18.12.1 | Gene3D:2.40.100.10 | Gene3D:3.30.70.330 | InterPro:CRIP | InterPro:Cyclophilin-like_dom_sf | InterPro:Cyclophilin-type_PPIase |
| InterPro:Cyclophilin-type_PPIase_dom | GO:GO:0000413 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003755 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0019538 |
| InterPro:IPR000504 | InterPro:IPR002130 | InterPro:IPR012677 | InterPro:IPR029000 | InterPro:Nucleotide-bd_a/b_plait_sf | PFAM:PF00076 |
| PFAM:PF00160 | PFscan:PS50072 | PFscan:PS50102 | PANTHER:PTHR11071 | PANTHER:PTHR11071:SF156 | InterPro:RBD_domain_sf |
| InterPro:RRM_dom | SMART:SM00360 | SUPFAM:SSF50891 | SUPFAM:SSF54928 | EnsemblPlantsGene:TraesCS3D01G065600 | EnsemblPlants:TraesCS3D01G065600.1 |
| TIGR:cd12235 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr3D:+:28965940..28967059
Molecular Weight (calculated)
37693.9 Da
IEP (calculated)
4.554
GRAVY (calculated)
-0.585
Length
334 amino acids
Sequence
(BLAST)
(BLAST)
001: MSVLIVTSVG DIEVDLHTDE LPITTKNFLK LCKIKYYNGC LFHKVERDFL AHTGDPTGIG TGGDSVYKIL HGDQDRFFDD EFRPDLRHSK AGTVAMAGGS
101: QFYFTLRDGV DGLDGKHTVP FMDIRIKHTY VLDDPFDDPP QLAELIPGDS PIGKPRAEIA EDRLDVPSDD ALANIPGVEQ ADNVLYISKL NPITEDEDLR
201: TIFSRFGTMT SAEIIRDCKT GDSLCYAFIE FEAKEDCERA YFKMEDSLIH DRRIQVDFAQ NVSKLWGRFR QSTRNADKDG RLKCGAPDHL ARDCDQGVEE
301: ENKGTNYVLE DQNTHRGGNN RRSYDLVFDD DGTY
101: QFYFTLRDGV DGLDGKHTVP FMDIRIKHTY VLDDPFDDPP QLAELIPGDS PIGKPRAEIA EDRLDVPSDD ALANIPGVEQ ADNVLYISKL NPITEDEDLR
201: TIFSRFGTMT SAEIIRDCKT GDSLCYAFIE FEAKEDCERA YFKMEDSLIH DRRIQVDFAQ NVSKLWGRFR QSTRNADKDG RLKCGAPDHL ARDCDQGVEE
301: ENKGTNYVLE DQNTHRGGNN RRSYDLVFDD DGTY
001: MSVLIVTSLG DIVIDLHSDK CPLTCKNFLK LCKIKYYNGC LFHTVQKDFT AQTGDPTGTG AGGDSIYKFL YGEQARFYKD EIHLDLKHSK TGTVAMASGG
101: ENLNASQFYF TLRDDLDYLD GKHTVFGQIA EGFDTLTRIN EAYVDPKNRP YKNIRIKHTH ILDDPFDDPP QLAEMMPDAS PEGKPKEEVK DDVRLEDDWV
201: PMDEELGAQE LEEVIREKAA HSSAVVLESI GDIPEAEVKP PDNVLFVCKL NPVTEDEDLH TIFSRFGTVV SADVIRDFKT GDSLCYAFIE FENKESCEQA
301: YFKMDNALID DRRIHVDFSQ SVSKLWSQFR QKDSQKGKGN GCFKCGSTDH IAKDCVGGPS SKFIVKDQNR QHGGGEGYEM VFEGDVHETP KHNSHERERS
401: EKIQRRSPHG NGEGKRQHRD ERDDGRRQHD REDARELERK HRERKERESR EDEDRRRRRR REESRDKESR RERDEDDHRS HRDYKERRRE RDDRHGREAR
501: HERRDR
101: ENLNASQFYF TLRDDLDYLD GKHTVFGQIA EGFDTLTRIN EAYVDPKNRP YKNIRIKHTH ILDDPFDDPP QLAEMMPDAS PEGKPKEEVK DDVRLEDDWV
201: PMDEELGAQE LEEVIREKAA HSSAVVLESI GDIPEAEVKP PDNVLFVCKL NPVTEDEDLH TIFSRFGTVV SADVIRDFKT GDSLCYAFIE FENKESCEQA
301: YFKMDNALID DRRIHVDFSQ SVSKLWSQFR QKDSQKGKGN GCFKCGSTDH IAKDCVGGPS SKFIVKDQNR QHGGGEGYEM VFEGDVHETP KHNSHERERS
401: EKIQRRSPHG NGEGKRQHRD ERDDGRRQHD REDARELERK HRERKERESR EDEDRRRRRR REESRDKESR RERDEDDHRS HRDYKERRRE RDDRHGREAR
501: HERRDR
Arabidopsis Description
CYP59Peptidyl-prolyl cis-trans isomerase CYP59 [Source:UniProtKB/Swiss-Prot;Acc:Q6Q151]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.