Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G371900.1 | Wheat | nucleus | 97.32 | 97.32 |
| TraesCS7A01G469800.1 | Wheat | nucleus | 96.6 | 96.6 |
| HORVU7Hr1G107520.5 | Barley | nucleus | 95.89 | 95.89 |
| HORVU1Hr1G040970.1 | Barley | cytosol, endoplasmic reticulum, mitochondrion | 36.14 | 83.82 |
| HORVU1Hr1G015670.5 | Barley | cytosol | 35.6 | 82.23 |
| Zm00001d036620_P001 | Maize | nucleus | 65.47 | 81.88 |
| HORVU6Hr1G042040.1 | Barley | endoplasmic reticulum | 30.05 | 81.55 |
| EER88795 | Sorghum | cytosol | 78.89 | 78.89 |
| Os06t0670500-01 | Rice | cytosol | 78.35 | 77.66 |
| Os06t0670400-00 | Rice | cytosol | 62.25 | 74.2 |
| TraesCS3D01G065600.1 | Wheat | cytosol | 44.19 | 73.95 |
| TraesCS4D01G241400.1 | Wheat | nucleus | 60.29 | 70.06 |
| PGSC0003DMT400011164 | Potato | cytosol | 21.65 | 65.41 |
| PGSC0003DMT400056014 | Potato | cytosol | 20.57 | 63.89 |
| GSMUA_Achr10P... | Banana | cytosol | 62.79 | 63.36 |
| PGSC0003DMT400011166 | Potato | nucleus | 32.2 | 61.64 |
| AT1G53720.1 | Thale cress | nucleus | 54.56 | 60.28 |
| PGSC0003DMT400069100 | Potato | cytosol | 35.6 | 58.02 |
| Bra030819.1-P | Field mustard | cytosol | 54.2 | 55.7 |
| Solyc07g066420.2.1 | Tomato | nucleus | 56.89 | 54.17 |
| VIT_19s0027g01660.t01 | Wine grape | nucleus | 60.64 | 53.13 |
| KRG93223 | Soybean | nucleus | 59.75 | 52.19 |
| KRH13056 | Soybean | nucleus | 58.86 | 51.97 |
| CDY72459 | Canola | cytosol, extracellular, plastid | 9.48 | 45.3 |
| TraesCS7D01G060700.1 | Wheat | cytosol | 12.16 | 42.5 |
| TraesCS7D01G279100.1 | Wheat | cytosol | 11.81 | 40.24 |
| CDY10512 | Canola | nucleus | 56.17 | 31.65 |
| TraesCS3D01G211900.1 | Wheat | nucleus | 18.96 | 21.24 |
| TraesCS2D01G237600.1 | Wheat | mitochondrion | 7.16 | 17.17 |
| TraesCS4D01G259800.1 | Wheat | cytosol | 13.77 | 13.03 |
| TraesCS7D01G277600.1 | Wheat | nucleus | 11.81 | 10.19 |
Protein Annotations
| MapMan:18.12.1 | Gene3D:2.40.100.10 | Gene3D:3.30.70.330 | Gene3D:4.10.60.10 | InterPro:CRIP | InterPro:Cyclophilin-like_dom_sf |
| InterPro:Cyclophilin-type_PPIase | InterPro:Cyclophilin-type_PPIase_dom | InterPro:Cyclophilin_PPIL4 | GO:GO:0000413 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003755 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008270 | GO:GO:0009987 | GO:GO:0019538 | InterPro:IPR000504 | InterPro:IPR001878 | InterPro:IPR002130 |
| InterPro:IPR012677 | InterPro:IPR029000 | InterPro:Nucleotide-bd_a/b_plait_sf | PFAM:PF00076 | PFAM:PF00098 | PFAM:PF00160 |
| PRINTS:PR00153 | PFscan:PS50072 | PFscan:PS50102 | PFscan:PS50158 | PANTHER:PTHR11071 | PANTHER:PTHR11071:SF156 |
| InterPro:RBD_domain_sf | InterPro:RRM_dom | SMART:SM00343 | SMART:SM00360 | SUPFAM:SSF50891 | SUPFAM:SSF54928 |
| SUPFAM:SSF57756 | EnsemblPlantsGene:TraesCS7D01G457200 | EnsemblPlants:TraesCS7D01G457200.1 | InterPro:Znf_CCHC | InterPro:Znf_CCHC_sf | TIGR:cd01921 |
| TIGR:cd12235 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr7D:-:575680098..575685910
Molecular Weight (calculated)
64475.0 Da
IEP (calculated)
5.892
GRAVY (calculated)
-1.230
Length
559 amino acids
Sequence
(BLAST)
(BLAST)
001: MSVLMVTSVG DIELDLHTDL CPLTTKNFLK LCKMKYYNGC LFHKVEKDFL AQSGDPTGTG SGGDSVYKYL YGDQARFFND EIRPELRHSK TGTIAMASAG
101: ENCNASQFYI TLRDDVDYLD DKHTVFGTVA EGLDTLTKIN EAYVDDKGRP FKDIRIKHTY ILDDPFDDPP QLAELIPENS PLGKPRDEVA EERLEDSWVP
201: LDETVDPGQL EELIRSKEAH ANAVILESVG DIPDAEVKPP DNVLFVCKLN PVTQDEDLYT IFSRFGSVTS AEIIRDFKTG DSLCYAFIEF EEKEACERAY
301: FKMDNCLIDD RRIHVDFSQS VSKLWGQFRQ SKRNGNKDGC FKCGAPDHIA RDCDQDGEQK PKAPNYVLKD DNTQRGGNNR RSYDFVFEDD TARRNTDRRK
401: VQKVDDQRSQ LPPRGDRDRN SSRERSQNDE KGVRQSKESA VSRGGRRPDD QHNHDRSSGR SSGRHDDRDY SKQHSRSRNM DDGEEEYKRR SGAGRYDRDD
501: KPNGERRHRD DDDRGKGDRH RRDERDRRAR SPDADRHRRE EAGHREASRD RERRHRDDR
101: ENCNASQFYI TLRDDVDYLD DKHTVFGTVA EGLDTLTKIN EAYVDDKGRP FKDIRIKHTY ILDDPFDDPP QLAELIPENS PLGKPRDEVA EERLEDSWVP
201: LDETVDPGQL EELIRSKEAH ANAVILESVG DIPDAEVKPP DNVLFVCKLN PVTQDEDLYT IFSRFGSVTS AEIIRDFKTG DSLCYAFIEF EEKEACERAY
301: FKMDNCLIDD RRIHVDFSQS VSKLWGQFRQ SKRNGNKDGC FKCGAPDHIA RDCDQDGEQK PKAPNYVLKD DNTQRGGNNR RSYDFVFEDD TARRNTDRRK
401: VQKVDDQRSQ LPPRGDRDRN SSRERSQNDE KGVRQSKESA VSRGGRRPDD QHNHDRSSGR SSGRHDDRDY SKQHSRSRNM DDGEEEYKRR SGAGRYDRDD
501: KPNGERRHRD DDDRGKGDRH RRDERDRRAR SPDADRHRRE EAGHREASRD RERRHRDDR
001: MSVLIVTSLG DIVIDLHSDK CPLTCKNFLK LCKIKYYNGC LFHTVQKDFT AQTGDPTGTG AGGDSIYKFL YGEQARFYKD EIHLDLKHSK TGTVAMASGG
101: ENLNASQFYF TLRDDLDYLD GKHTVFGQIA EGFDTLTRIN EAYVDPKNRP YKNIRIKHTH ILDDPFDDPP QLAEMMPDAS PEGKPKEEVK DDVRLEDDWV
201: PMDEELGAQE LEEVIREKAA HSSAVVLESI GDIPEAEVKP PDNVLFVCKL NPVTEDEDLH TIFSRFGTVV SADVIRDFKT GDSLCYAFIE FENKESCEQA
301: YFKMDNALID DRRIHVDFSQ SVSKLWSQFR QKDSQKGKGN GCFKCGSTDH IAKDCVGGPS SKFIVKDQNR QHGGGEGYEM VFEGDVHETP KHNSHERERS
401: EKIQRRSPHG NGEGKRQHRD ERDDGRRQHD REDARELERK HRERKERESR EDEDRRRRRR REESRDKESR RERDEDDHRS HRDYKERRRE RDDRHGREAR
501: HERRDR
101: ENLNASQFYF TLRDDLDYLD GKHTVFGQIA EGFDTLTRIN EAYVDPKNRP YKNIRIKHTH ILDDPFDDPP QLAEMMPDAS PEGKPKEEVK DDVRLEDDWV
201: PMDEELGAQE LEEVIREKAA HSSAVVLESI GDIPEAEVKP PDNVLFVCKL NPVTEDEDLH TIFSRFGTVV SADVIRDFKT GDSLCYAFIE FENKESCEQA
301: YFKMDNALID DRRIHVDFSQ SVSKLWSQFR QKDSQKGKGN GCFKCGSTDH IAKDCVGGPS SKFIVKDQNR QHGGGEGYEM VFEGDVHETP KHNSHERERS
401: EKIQRRSPHG NGEGKRQHRD ERDDGRRQHD REDARELERK HRERKERESR EDEDRRRRRR REESRDKESR RERDEDDHRS HRDYKERRRE RDDRHGREAR
501: HERRDR
Arabidopsis Description
CYP59Peptidyl-prolyl cis-trans isomerase CYP59 [Source:UniProtKB/Swiss-Prot;Acc:Q6Q151]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.