Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G371900.1 | Wheat | nucleus | 96.96 | 96.96 |
| TraesCS7D01G457200.1 | Wheat | nucleus | 96.6 | 96.6 |
| HORVU7Hr1G107520.5 | Barley | nucleus | 96.42 | 96.42 |
| HORVU1Hr1G040970.1 | Barley | cytosol, endoplasmic reticulum, mitochondrion | 35.96 | 83.4 |
| HORVU1Hr1G015670.5 | Barley | cytosol | 35.42 | 81.82 |
| Zm00001d036620_P001 | Maize | nucleus | 65.3 | 81.66 |
| HORVU6Hr1G042040.1 | Barley | endoplasmic reticulum | 29.87 | 81.07 |
| EER88795 | Sorghum | cytosol | 78.71 | 78.71 |
| Os06t0670500-01 | Rice | cytosol | 79.07 | 78.37 |
| Os06t0670400-00 | Rice | cytosol | 62.61 | 74.63 |
| TraesCS4A01G064400.1 | Wheat | nucleus | 59.93 | 70.08 |
| TraesCS3A01G064900.1 | Wheat | cytosol | 49.37 | 68.15 |
| PGSC0003DMT400011164 | Potato | cytosol | 21.65 | 65.41 |
| PGSC0003DMT400056014 | Potato | cytosol | 20.57 | 63.89 |
| GSMUA_Achr10P... | Banana | cytosol | 62.61 | 63.18 |
| PGSC0003DMT400011166 | Potato | nucleus | 32.2 | 61.64 |
| AT1G53720.1 | Thale cress | nucleus | 54.56 | 60.28 |
| PGSC0003DMT400069100 | Potato | cytosol | 35.42 | 57.73 |
| Bra030819.1-P | Field mustard | cytosol | 54.02 | 55.51 |
| Solyc07g066420.2.1 | Tomato | nucleus | 57.25 | 54.51 |
| VIT_19s0027g01660.t01 | Wine grape | nucleus | 61.36 | 53.76 |
| KRG93223 | Soybean | nucleus | 59.75 | 52.19 |
| KRH13056 | Soybean | nucleus | 58.86 | 51.97 |
| CDY72459 | Canola | cytosol, extracellular, plastid | 9.48 | 45.3 |
| TraesCS4A01G423000.1 | Wheat | cytosol | 11.99 | 41.88 |
| TraesCS7A01G066500.1 | Wheat | cytosol | 11.99 | 41.88 |
| TraesCS7A01G279300.1 | Wheat | cytosol, nucleus | 11.45 | 39.02 |
| CDY10512 | Canola | nucleus | 55.81 | 31.45 |
| TraesCS3A01G209000.1 | Wheat | nucleus | 19.14 | 21.62 |
| TraesCS4A01G045200.1 | Wheat | cytosol | 13.77 | 13.05 |
| TraesCS7A01G277700.1 | Wheat | cytosol | 11.81 | 10.19 |
Protein Annotations
| MapMan:18.12.1 | Gene3D:2.40.100.10 | Gene3D:3.30.70.330 | Gene3D:4.10.60.10 | InterPro:CRIP | InterPro:Cyclophilin-like_dom_sf |
| InterPro:Cyclophilin-type_PPIase | InterPro:Cyclophilin-type_PPIase_dom | InterPro:Cyclophilin_PPIL4 | GO:GO:0000413 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003755 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008270 | GO:GO:0009987 | GO:GO:0019538 | InterPro:IPR000504 | InterPro:IPR001878 | InterPro:IPR002130 |
| InterPro:IPR012677 | InterPro:IPR029000 | InterPro:Nucleotide-bd_a/b_plait_sf | PFAM:PF00076 | PFAM:PF00098 | PFAM:PF00160 |
| PRINTS:PR00153 | PFscan:PS50072 | PFscan:PS50102 | PFscan:PS50158 | PANTHER:PTHR11071 | PANTHER:PTHR11071:SF156 |
| InterPro:RBD_domain_sf | InterPro:RRM_dom | SMART:SM00343 | SMART:SM00360 | SUPFAM:SSF50891 | SUPFAM:SSF54928 |
| SUPFAM:SSF57756 | EnsemblPlantsGene:TraesCS7A01G469800 | EnsemblPlants:TraesCS7A01G469800.1 | InterPro:Znf_CCHC | InterPro:Znf_CCHC_sf | TIGR:cd01921 |
| TIGR:cd12235 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr7A:-:666184103..666189827
Molecular Weight (calculated)
64201.8 Da
IEP (calculated)
6.194
GRAVY (calculated)
-1.193
Length
559 amino acids
Sequence
(BLAST)
(BLAST)
001: MSVLMVTSVG DIELDLHTDL CPLTTKNFLK LCKMKYYNGC LFHKVEKDFL AQSGDPTGTG SGGDSVYKYL YGDQARFFND EIRAELRHSK TGTIAMASAG
101: ENCNASQFYI TLRDDVDYLD DKHTVFGTVA EGLDTLTKIN EAYVDDKGRP FKDIRIKHTY ILDDPFDDPP QLAELIPENS PLGKPRDEVA EERLEDSWVP
201: LDETVDPGQL EELIRSKEAH ANAVILESVG DIPDAEVKPP DNVLFVCKLN PVTQDEDLYT IFSRFGSVTS AEIIRDFKTG DSLCYAFIEF EAKEACERAY
301: FKMDNCLIDD RRIHVDFSQS VSKLWGQFRQ SKRNGNKDGC FKCGAPDHIA RDCDQDGEQK PKAPNYVLKD DNTQRGGNNR RSYDFVFEDD TAHRNTDRRK
401: VQKVDDQRSQ LPPRGDRDRN SSRERSQTDE KGGRQSKEGV VSRGGRRPED HHSHDRSGGR GSGRHDDRDY SKQHSRSRNM DGGEEDYKRR SGAGRYDRDD
501: KPDGDRRHRD DDDRGKGDRH RRDERDRRAR SPDADRHRRE DAGHREVSRH RERRHRDDR
101: ENCNASQFYI TLRDDVDYLD DKHTVFGTVA EGLDTLTKIN EAYVDDKGRP FKDIRIKHTY ILDDPFDDPP QLAELIPENS PLGKPRDEVA EERLEDSWVP
201: LDETVDPGQL EELIRSKEAH ANAVILESVG DIPDAEVKPP DNVLFVCKLN PVTQDEDLYT IFSRFGSVTS AEIIRDFKTG DSLCYAFIEF EAKEACERAY
301: FKMDNCLIDD RRIHVDFSQS VSKLWGQFRQ SKRNGNKDGC FKCGAPDHIA RDCDQDGEQK PKAPNYVLKD DNTQRGGNNR RSYDFVFEDD TAHRNTDRRK
401: VQKVDDQRSQ LPPRGDRDRN SSRERSQTDE KGGRQSKEGV VSRGGRRPED HHSHDRSGGR GSGRHDDRDY SKQHSRSRNM DGGEEDYKRR SGAGRYDRDD
501: KPDGDRRHRD DDDRGKGDRH RRDERDRRAR SPDADRHRRE DAGHREVSRH RERRHRDDR
001: MSVLIVTSLG DIVIDLHSDK CPLTCKNFLK LCKIKYYNGC LFHTVQKDFT AQTGDPTGTG AGGDSIYKFL YGEQARFYKD EIHLDLKHSK TGTVAMASGG
101: ENLNASQFYF TLRDDLDYLD GKHTVFGQIA EGFDTLTRIN EAYVDPKNRP YKNIRIKHTH ILDDPFDDPP QLAEMMPDAS PEGKPKEEVK DDVRLEDDWV
201: PMDEELGAQE LEEVIREKAA HSSAVVLESI GDIPEAEVKP PDNVLFVCKL NPVTEDEDLH TIFSRFGTVV SADVIRDFKT GDSLCYAFIE FENKESCEQA
301: YFKMDNALID DRRIHVDFSQ SVSKLWSQFR QKDSQKGKGN GCFKCGSTDH IAKDCVGGPS SKFIVKDQNR QHGGGEGYEM VFEGDVHETP KHNSHERERS
401: EKIQRRSPHG NGEGKRQHRD ERDDGRRQHD REDARELERK HRERKERESR EDEDRRRRRR REESRDKESR RERDEDDHRS HRDYKERRRE RDDRHGREAR
501: HERRDR
101: ENLNASQFYF TLRDDLDYLD GKHTVFGQIA EGFDTLTRIN EAYVDPKNRP YKNIRIKHTH ILDDPFDDPP QLAEMMPDAS PEGKPKEEVK DDVRLEDDWV
201: PMDEELGAQE LEEVIREKAA HSSAVVLESI GDIPEAEVKP PDNVLFVCKL NPVTEDEDLH TIFSRFGTVV SADVIRDFKT GDSLCYAFIE FENKESCEQA
301: YFKMDNALID DRRIHVDFSQ SVSKLWSQFR QKDSQKGKGN GCFKCGSTDH IAKDCVGGPS SKFIVKDQNR QHGGGEGYEM VFEGDVHETP KHNSHERERS
401: EKIQRRSPHG NGEGKRQHRD ERDDGRRQHD REDARELERK HRERKERESR EDEDRRRRRR REESRDKESR RERDEDDHRS HRDYKERRRE RDDRHGREAR
501: HERRDR
Arabidopsis Description
CYP59Peptidyl-prolyl cis-trans isomerase CYP59 [Source:UniProtKB/Swiss-Prot;Acc:Q6Q151]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.