Factsheet for TraesCS7A01G279300.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus, cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

nucleus: 26228564

msms PMID: 26228564 doi

E Bancel, T Bonnot, M Davanture, G Branlard, M Zivy, P Martre

Blaise Pascal University, UMR1095 Genetics, Diversity and Ecophysiology of Cereals, Avenue des Landais, F-63 170 Aubière, France., CNRS, PAPPSO, UMR 0320/8120 Génétique Quantitative et Évolution - Le Moulon, F-91190 Gif-sur-Yvette, France., INRA, UMR1095 Genetics, Diversity and Ecophysiology of Cereals, 5 chemin de Beaulieu, F-63 039 Clermont-Ferrand, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G279100.1	Wheat	cytosol	98.17	98.17
TraesCS7B01G180900.1	Wheat	cytosol	96.95	96.95
Os08t0559400-01	Rice	cytosol, nucleus	92.07	92.07
EES14084	Sorghum	cytosol	91.46	91.46
GSMUA_Achr8P32900_001	Banana	cytosol	86.59	86.59
KRH67956	Soybean	endoplasmic reticulum, nucleus	85.37	85.37
VIT_08s0007g02900.t01	Wine grape	cytosol	85.37	84.34
PGSC0003DMT400022853	Potato	cytosol	83.54	83.54
Solyc09g010190.2.1	Tomato	nucleus	83.54	83.54
Bra005297.1-P	Field mustard	cytosol	82.32	82.32
CDX75068	Canola	cytosol	82.32	82.32
CDX84155	Canola	cytosol	82.32	82.32
AT2G36130.1	Thale cress	cytosol	81.1	81.1
HORVU7Hr1G059320.3	Barley	plastid	97.56	79.6
Zm00001d031937_P001	Maize	cytosol	81.71	77.01
KRG96215	Soybean	nucleus	85.37	63.35
TraesCS7A01G066500.1	Wheat	cytosol	46.95	48.12
TraesCS4A01G423000.1	Wheat	cytosol	46.34	47.5
TraesCS3A01G209000.1	Wheat	nucleus	47.56	15.76
TraesCS3A01G064900.1	Wheat	cytosol	37.8	15.31
TraesCS4A01G064400.1	Wheat	nucleus	39.63	13.6
TraesCS7A01G277700.1	Wheat	cytosol	48.78	12.35
TraesCS4A01G045200.1	Wheat	cytosol	42.07	11.69
TraesCS7A01G469800.1	Wheat	nucleus	39.02	11.45

Protein Annotations

MapMan:18.12.1	Gene3D:2.40.100.10	InterPro:Cyclophilin-like_dom_sf	InterPro:Cyclophilin-type_PPIase	InterPro:Cyclophilin-type_PPIase_CS	InterPro:Cyclophilin-type_PPIase_dom
GO:GO:0000413	GO:GO:0003674	GO:GO:0003755	GO:GO:0003824	GO:GO:0006457	GO:GO:0006464
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0019538	InterPro:IPR002130	InterPro:IPR029000
PFAM:PF00160	PIRSF:PIRSF001467	PRINTS:PR00153	ScanProsite:PS00170	PFscan:PS50072	PANTHER:PTHR11071
PANTHER:PTHR11071:SF213	SUPFAM:SSF50891	EnsemblPlantsGene:TraesCS7A01G279300	EnsemblPlants:TraesCS7A01G279300.1	:	:

Description

No Description!

Coordinates

chr7A:+:297941974..297943977

Molecular Weight (calculated)

18126.7 Da

IEP (calculated)

8.706

GRAVY (calculated)

-0.456

Length

164 amino acids

Sequence
(BLAST)

001: MWGGDDGGTP EVTLETSMGA FTVEMYHKHA PKTCRNFVEL ARRKYYDNVV FHRIIKDFIV QGGDPSGTGR GGESIYGAKF EDEIRPDLKH TGAGILSMAN
101: AGPNTNGSQF FITLAPCQSL DGKHTIFGRV SRGMEIVKRL GSIQTDKNDR PIHEVKILRT VVKD

Best Arabidopsis Sequence Match ( AT2G36130.1 )
(BLAST)

001: MSARPEGSPP EVTLETSMGP FTVEMYYKHS PRTCRNFLEL SRRGYYDNVL FHRIVKDFIV QGGDPTGTGR GGESIYGSKF EDEINKELKH TGAGILSMAN
101: AGPNTNGSQF FITLAPQPSL DGKHTIFGRV CRGMEVIKRL GSVQTDNTDR PIHEVKILRT KVID

Arabidopsis Description

CYP18-2Peptidyl-prolyl cis-trans isomerase CYP18-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SIH1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.