Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G279100.1 | Wheat | cytosol | 98.78 | 98.78 |
| TraesCS7A01G279300.1 | Wheat | cytosol, nucleus | 96.95 | 96.95 |
| EES14084 | Sorghum | cytosol | 92.07 | 92.07 |
| Os08t0559400-01 | Rice | cytosol, nucleus | 90.24 | 90.24 |
| KRH67956 | Soybean | endoplasmic reticulum, nucleus | 87.2 | 87.2 |
| GSMUA_Achr8P32900_001 | Banana | cytosol | 86.59 | 86.59 |
| VIT_08s0007g02900.t01 | Wine grape | cytosol | 87.2 | 86.14 |
| Solyc09g010190.2.1 | Tomato | nucleus | 84.15 | 84.15 |
| PGSC0003DMT400022853 | Potato | cytosol | 84.15 | 84.15 |
| Bra005297.1-P | Field mustard | cytosol | 83.54 | 83.54 |
| CDX84155 | Canola | cytosol | 83.54 | 83.54 |
| CDX75068 | Canola | cytosol | 83.54 | 83.54 |
| AT2G36130.1 | Thale cress | cytosol | 81.71 | 81.71 |
| HORVU7Hr1G059320.3 | Barley | plastid | 96.95 | 79.1 |
| Zm00001d031937_P001 | Maize | cytosol | 82.32 | 77.59 |
| KRG96215 | Soybean | nucleus | 87.2 | 64.71 |
| TraesCS2B01G255000.1 | Wheat | mitochondrion | 26.22 | 18.45 |
| TraesCS3B01G239300.1 | Wheat | nucleus | 47.56 | 15.6 |
| TraesCS4B01G241800.1 | Wheat | nucleus | 38.41 | 13.52 |
| TraesCS7B01G175400.1 | Wheat | cytosol | 48.78 | 12.35 |
| TraesCS4B01G260100.1 | Wheat | cytosol | 42.07 | 11.69 |
| TraesCS7B01G371900.1 | Wheat | nucleus | 39.63 | 11.63 |
Protein Annotations
| MapMan:18.12.1 | Gene3D:2.40.100.10 | InterPro:Cyclophilin-like_dom_sf | InterPro:Cyclophilin-type_PPIase | InterPro:Cyclophilin-type_PPIase_CS | InterPro:Cyclophilin-type_PPIase_dom |
| GO:GO:0000413 | GO:GO:0003674 | GO:GO:0003755 | GO:GO:0003824 | GO:GO:0006457 | GO:GO:0006464 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0019538 | InterPro:IPR002130 | InterPro:IPR029000 |
| PFAM:PF00160 | PIRSF:PIRSF001467 | PRINTS:PR00153 | ScanProsite:PS00170 | PFscan:PS50072 | PANTHER:PTHR11071 |
| PANTHER:PTHR11071:SF213 | SUPFAM:SSF50891 | EnsemblPlantsGene:TraesCS7B01G180900 | EnsemblPlants:TraesCS7B01G180900.1 | : | : |
Description
No Description!
Coordinates
chr7B:-:271298256..271317232
Molecular Weight (calculated)
18121.7 Da
IEP (calculated)
8.481
GRAVY (calculated)
-0.450
Length
164 amino acids
Sequence
(BLAST)
(BLAST)
001: MWGGDDGGTP EVTLETSMGS FTVEMYHKHA PKTCRNFVEL ARRKYYDNVV FHRIIKDFIV QGGDPSGTGR GGESIYGAKF EDEIKPELKH TGAGILSMAN
101: AGPNTNGSQF FITLAPCQSL DGKHTIFGRV CRGMEIVKRL GSIQTDKNDR PINEVKILRT VVKD
101: AGPNTNGSQF FITLAPCQSL DGKHTIFGRV CRGMEIVKRL GSIQTDKNDR PINEVKILRT VVKD
001: MSARPEGSPP EVTLETSMGP FTVEMYYKHS PRTCRNFLEL SRRGYYDNVL FHRIVKDFIV QGGDPTGTGR GGESIYGSKF EDEINKELKH TGAGILSMAN
101: AGPNTNGSQF FITLAPQPSL DGKHTIFGRV CRGMEVIKRL GSVQTDNTDR PIHEVKILRT KVID
101: AGPNTNGSQF FITLAPQPSL DGKHTIFGRV CRGMEVIKRL GSVQTDNTDR PIHEVKILRT KVID
Arabidopsis Description
CYP18-2Peptidyl-prolyl cis-trans isomerase CYP18-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SIH1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.