Factsheet for Zm00001d031937_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES14084	Sorghum	cytosol	82.76	87.8
TraesCS7D01G279100.1	Wheat	cytosol	77.59	82.32
TraesCS7B01G180900.1	Wheat	cytosol	77.59	82.32
Os08t0559400-01	Rice	cytosol, nucleus	77.59	82.32
TraesCS7A01G279300.1	Wheat	cytosol, nucleus	77.01	81.71
GSMUA_Achr8P32900_001	Banana	cytosol	73.56	78.05
KRH67956	Soybean	endoplasmic reticulum, nucleus	73.56	78.05
VIT_08s0007g02900.t01	Wine grape	cytosol	72.99	76.51
Solyc09g010190.2.1	Tomato	nucleus	70.69	75.0
PGSC0003DMT400022853	Potato	cytosol	70.69	75.0
Bra005297.1-P	Field mustard	cytosol	69.54	73.78
CDX84155	Canola	cytosol	69.54	73.78
CDX75068	Canola	cytosol	69.54	73.78
AT2G36130.1	Thale cress	cytosol	68.39	72.56
HORVU7Hr1G059320.3	Barley	plastid	77.59	67.16
KRG96215	Soybean	nucleus	72.41	57.01
Zm00001d036035_P001	Maize	cytosol	36.78	40.0
Zm00001d021332_P002	Maize	mitochondrion	22.99	17.17
Zm00001d044297_P002	Maize	nucleus	38.51	12.23
Zm00001d036620_P001	Maize	nucleus	30.46	11.86
Zm00001d049958_P002	Maize	cytosol	42.53	11.03
Zm00001d028109_P006	Maize	cytosol	35.63	9.32

Protein Annotations

MapMan:18.12.1	Gene3D:2.40.100.10	UniProt:A0A1D6KMF6	InterPro:Cyclophilin-like_dom_sf	InterPro:Cyclophilin-type_PPIase	InterPro:Cyclophilin-type_PPIase_dom
GO:GO:0000413	GO:GO:0003674	GO:GO:0003755	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016853	GO:GO:0019538	InterPro:IPR002130	InterPro:IPR029000	ProteinID:ONM04024.1
PFAM:PF00160	PIRSF:PIRSF001467	PRINTS:PR00153	PFscan:PS50072	PANTHER:PTHR11071	PANTHER:PTHR11071:SF213
SUPFAM:SSF50891	UniParc:UPI000842E815	EnsemblPlantsGene:Zm00001d031937	EnsemblPlants:Zm00001d031937_P001	EnsemblPlants:Zm00001d031937_T001	:

Description

Peptidyl-prolyl cis-trans isomerase CYP18-2

Coordinates

chr1:+:207438528..207441291

Molecular Weight (calculated)

19214.2 Da

IEP (calculated)

7.978

GRAVY (calculated)

-0.230

Length

174 amino acids

Sequence
(BLAST)

001: MWGSTDGGTP EVTLETSMGA VSVEMYYRHA PKTCRNFVEL ARRGYYDNVI FHRIIKVSPE FPISISLCKV GILQEPAEVA SPSMGEQAKF EDEIKTELKH
101: TGAGILSMAN AGPNTNGSQF FITLAPCQSL DGKHTIFGRV CRGMEIVKRL GSVQTDKNDR PIHEVKILRA VVKD

Best Arabidopsis Sequence Match ( AT2G36130.1 )
(BLAST)

001: MSARPEGSPP EVTLETSMGP FTVEMYYKHS PRTCRNFLEL SRRGYYDNVL FHRIVKDFIV QGGDPTGTGR GGESIYGSKF EDEINKELKH TGAGILSMAN
101: AGPNTNGSQF FITLAPQPSL DGKHTIFGRV CRGMEVIKRL GSVQTDNTDR PIHEVKILRT KVID

Arabidopsis Description

CYP18-2Peptidyl-prolyl cis-trans isomerase CYP18-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SIH1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.