Factsheet for Zm00001d044297_P002

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES03161	Sorghum	nucleus	88.5	94.54
Os01t0582400-01	Rice	extracellular	75.0	82.36
TraesCS3A01G209000.1	Wheat	nucleus	71.9	79.6
TraesCS3B01G239300.1	Wheat	nucleus	72.08	79.0
TraesCS3D01G211900.1	Wheat	nucleus	71.53	78.56
HORVU3Hr1G050400.5	Barley	cytosol, nucleus	50.91	71.36
KRH05304	Soybean	nucleus	57.85	64.3
VIT_04s0008g01370.t01	Wine grape	cytosol	58.21	64.06
CDX68936	Canola	nucleus	52.74	61.88
Solyc08g062700.2.1	Tomato	nucleus	54.56	60.77
GSMUA_Achr8P05680_001	Banana	endoplasmic reticulum	62.59	60.71
CDX75321	Canola	nucleus	53.83	59.96
Bra011410.1-P	Field mustard	nucleus	54.01	59.92
AT4G33060.1	Thale cress	nucleus	53.83	58.53
Zm00001d036035_P001	Maize	cytosol	12.77	43.75
Zm00001d031937_P001	Maize	cytosol	12.23	38.51
Zm00001d036620_P001	Maize	nucleus	18.61	22.82
Zm00001d021332_P002	Maize	mitochondrion	6.93	16.31
Zm00001d028109_P006	Maize	cytosol	17.34	14.29
Zm00001d049958_P002	Maize	cytosol	13.69	11.18

Protein Annotations

MapMan:18.12.1	Gene3D:2.40.100.10	UniProt:A0A1D6NKN6	ncoils:Coil	InterPro:Cyclophilin-like_dom_sf	InterPro:Cyclophilin-type_PPIase
InterPro:Cyclophilin-type_PPIase_CS	InterPro:Cyclophilin-type_PPIase_dom	GO:GO:0000413	GO:GO:0003674	GO:GO:0003755	GO:GO:0003824
GO:GO:0005575	GO:GO:0006457	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009506
GO:GO:0009987	GO:GO:0016853	GO:GO:0019538	InterPro:IPR002130	InterPro:IPR029000	ProteinID:ONM40801.1
PFAM:PF00160	PRINTS:PR00153	ScanProsite:PS00170	PFscan:PS50072	PANTHER:PTHR11071	PANTHER:PTHR11071:SF152
SUPFAM:SSF50891	UniParc:UPI000844287F	EnsemblPlantsGene:Zm00001d044297	EnsemblPlants:Zm00001d044297_P002	EnsemblPlants:Zm00001d044297_T002	SEG:seg

Description

Peptidyl-prolyl cis-trans isomerase CYP57

Coordinates

chr3:-:224484376..224492604

Molecular Weight (calculated)

62699.5 Da

IEP (calculated)

6.047

GRAVY (calculated)

-0.875

Length

548 amino acids

Sequence
(BLAST)

001: MSSVYVLEPP TKGKVVVQTT AGPLDIELWP KEAPKAARNF VQLCLEGYYD GTLFHRVIKN FLVQGGDPTG SGTGGESIYG APFADEFHSR LRFNHRGLVA
101: CANAGTSHSN GSQFFITLDR CDWLDKKNTI FGKVMWSSSR LESFFQCMSW YSVPFLWNYH GWLHVFLQVT GDSIFNLLSL ADVETDKDDR PVYVQKILSV
201: EVLWDPFEDI VPRQLKKAES VAKADAEVKP KKKAVKQLNV LSFGDEVEEE ENEAATSVQA KIKSIHDVLD DPRFLKGEPE DVQLSKEQEE MKKVTVQTVR
301: DALISKKVES REQDNAPLSD DFPEDENEED FDNRMRAQIL KKRRELGDVC PHETSKADKP HHKDKELSDR RSNIEHRRDT EDDDQEHELQ KAKKLSLKKK
401: GAGSEASAER MSKADANLQL LNPAEQERHL QKQKKRRLQG REDETLAKLQ KFKSSFLSKN LATNHVEEKN PSTDKAEKED EEEDDYKGWH TNLLSFLPSS
501: SKDGMTRKDD PDDYVVVDPL LEKGKEKFNK MQAKLKRRER EWAGRSLT

Best Arabidopsis Sequence Match ( AT4G33060.1 )
(BLAST)

001: MSTVYVLEPP TKGKVIVNTT HGPIDVELWP KEAPKSVRNF VQLCLEGYFD NTIFHRVIPG FLVQGGDPTG SGTGGDSIYG GVFADEFHSR LRFSHRGIVA
101: MANASSPNSN GSQFFFTLDK CDWLDKKHTI FGKVTGDSIY NLLRLGEVDT SKDDRPLDPA PKILSVEVLW NPFEDIVPRV LAKTSEESAA EIKEPPTKPV
201: KKLNLLSFGE EAEEEEKELA VVKQKIKSSH DVLNDPRLLK AEASDKERNA SESKEVLSVR EALNAKKEAA QKDKSFSVSD TVGNSDDDDD GEDETKFDAK
301: MRNQVLSRRK EIGDTPSKPT QKKKSSSLKG REESTQRSDA VSSEDEKPRM EKLSLKKKGI GSEAKAEHME KGDTDLQLYN ASERARQLHK LKKRRLQGNE
401: DSVLAKLEKF KQSISAKPFT SSNEPVVLTS SSEPVDNKEE DLSDWKNVKL KFAPERGKDK MSRRDDPDAY MVVDPLLEKG KEKFNRMQAK QKRREREWSG
501: KSLA

Arabidopsis Description

CYP57Peptidyl-prolyl cis-trans isomerase CYP57 [Source:UniProtKB/Swiss-Prot;Acc:Q6Q152]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.