Factsheet for TraesCS3D01G211900.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G209000.1	Wheat	nucleus	97.39	98.18
TraesCS3B01G239300.1	Wheat	nucleus	97.8	97.6
HORVU3Hr1G050400.5	Barley	cytosol, nucleus	66.53	84.91
Os01t0582400-01	Rice	extracellular	83.97	83.97
EES03161	Sorghum	nucleus	79.16	77.0
Zm00001d044297_P002	Maize	nucleus	78.56	71.53
VIT_04s0008g01370.t01	Wine grape	cytosol	61.52	61.65
Solyc08g062700.2.1	Tomato	nucleus	59.72	60.57
KRH05304	Soybean	nucleus	59.12	59.84
CDX68936	Canola	nucleus	55.91	59.74
GSMUA_Achr8P05680_001	Banana	endoplasmic reticulum	66.73	58.94
CDX75321	Canola	nucleus	57.31	58.13
Bra011410.1-P	Field mustard	nucleus	57.52	58.1
AT4G33060.1	Thale cress	nucleus	56.51	55.95
TraesCS7D01G279100.1	Wheat	cytosol	15.43	46.95
TraesCS7D01G060700.1	Wheat	cytosol	14.23	44.38
TraesCS3D01G065600.1	Wheat	cytosol	16.43	24.55
TraesCS4D01G241400.1	Wheat	nucleus	19.24	19.96
TraesCS7D01G457200.1	Wheat	nucleus	21.24	18.96
TraesCS2D01G237600.1	Wheat	mitochondrion	8.22	17.6
TraesCS4D01G259800.1	Wheat	cytosol	18.64	15.74
TraesCS7D01G277600.1	Wheat	nucleus	14.83	11.42

Protein Annotations

MapMan:18.12.1	Gene3D:2.40.100.10	InterPro:Cyclophilin-like_dom_sf	InterPro:Cyclophilin-type_PPIase	InterPro:Cyclophilin-type_PPIase_CS	InterPro:Cyclophilin-type_PPIase_dom
GO:GO:0000413	GO:GO:0003674	GO:GO:0003755	GO:GO:0003824	GO:GO:0005575	GO:GO:0006457
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009506	GO:GO:0009987	GO:GO:0019538
InterPro:IPR002130	InterPro:IPR029000	PFAM:PF00160	PRINTS:PR00153	ScanProsite:PS00170	PFscan:PS50072
PANTHER:PTHR11071	PANTHER:PTHR11071:SF152	SUPFAM:SSF50891	EnsemblPlantsGene:TraesCS3D01G211900	EnsemblPlants:TraesCS3D01G211900.1	TIGR:cd01925
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr3D:-:283318713..283328049

Molecular Weight (calculated)

56978.6 Da

IEP (calculated)

5.761

GRAVY (calculated)

-1.044

Length

499 amino acids

Sequence
(BLAST)

001: MSSVYVLEPP TKGKVVVQTT AGPIDIELWA KEAPKATRNF VQLCLEGYYD GTLFHRVIKS FLIQGGDPTG SGTRGESIYG APFADEFHSR LRFNHRGLLA
101: CANAGTPHSN GSQFFITLDR CDWLDKKNTI FGKVTGDSIF NLLALADIET DKDDRPVYPQ KILSVEVLWN PFDDIVPRQL KKIQPAPKAD AERKPEKKAV
201: KQLNVLSFGD EVEEEENEAA SFVNDKIKSI HDVLDDSRFL KVEPQVEQLS KEEEEKKNET VLSIREALIS KKADSREPEH DPENDDSPED ENEEDFDNRM
301: RSRILKKRRE LGDIRQSQSS KKDKSHQKDK ELPAHRSDDD DDDDDDDDDH QLSKSRKLSL KKKGIGSEAN TERMSRGDVN LQLLNPAEQE KHLKKQRKRS
401: LQGREEETLA KLQKFKASLM SNKPANTETK AEDGEDYKEW HANRLTFTPE SSKDGMTRKD DPNDYVVVDP LLEKGKQKFN KMQAKLKKRD REWAGRSLT

Best Arabidopsis Sequence Match ( AT4G33060.1 )
(BLAST)

001: MSTVYVLEPP TKGKVIVNTT HGPIDVELWP KEAPKSVRNF VQLCLEGYFD NTIFHRVIPG FLVQGGDPTG SGTGGDSIYG GVFADEFHSR LRFSHRGIVA
101: MANASSPNSN GSQFFFTLDK CDWLDKKHTI FGKVTGDSIY NLLRLGEVDT SKDDRPLDPA PKILSVEVLW NPFEDIVPRV LAKTSEESAA EIKEPPTKPV
201: KKLNLLSFGE EAEEEEKELA VVKQKIKSSH DVLNDPRLLK AEASDKERNA SESKEVLSVR EALNAKKEAA QKDKSFSVSD TVGNSDDDDD GEDETKFDAK
301: MRNQVLSRRK EIGDTPSKPT QKKKSSSLKG REESTQRSDA VSSEDEKPRM EKLSLKKKGI GSEAKAEHME KGDTDLQLYN ASERARQLHK LKKRRLQGNE
401: DSVLAKLEKF KQSISAKPFT SSNEPVVLTS SSEPVDNKEE DLSDWKNVKL KFAPERGKDK MSRRDDPDAY MVVDPLLEKG KEKFNRMQAK QKRREREWSG
501: KSLA

Arabidopsis Description

CYP57Peptidyl-prolyl cis-trans isomerase CYP57 [Source:UniProtKB/Swiss-Prot;Acc:Q6Q152]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.