Factsheet for TraesCS3A01G209000.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G239300.1	Wheat	nucleus	98.38	97.4
TraesCS3D01G211900.1	Wheat	nucleus	98.18	97.39
HORVU3Hr1G050400.5	Barley	cytosol, nucleus	67.27	85.17
Os01t0582400-01	Rice	extracellular	84.24	83.57
EES03161	Sorghum	nucleus	80.2	77.39
Zm00001d044297_P002	Maize	nucleus	79.6	71.9
VIT_04s0008g01370.t01	Wine grape	cytosol	62.22	61.85
KRH05304	Soybean	nucleus	60.4	60.65
Solyc08g062700.2.1	Tomato	nucleus	60.2	60.57
CDX68936	Canola	nucleus	56.77	60.17
GSMUA_Achr8P05680_001	Banana	endoplasmic reticulum	67.88	59.47
CDX75321	Canola	nucleus	58.18	58.54
Bra011410.1-P	Field mustard	nucleus	58.38	58.5
AT4G33060.1	Thale cress	nucleus	57.37	56.35
TraesCS7A01G279300.1	Wheat	cytosol, nucleus	15.76	47.56
TraesCS4A01G423000.1	Wheat	cytosol	14.55	45.0
TraesCS7A01G066500.1	Wheat	cytosol	14.55	45.0
TraesCS3A01G064900.1	Wheat	cytosol	18.99	23.21
TraesCS4A01G064400.1	Wheat	nucleus	20.4	21.13
TraesCS7A01G469800.1	Wheat	nucleus	21.62	19.14
TraesCS4A01G045200.1	Wheat	cytosol	19.39	16.27
TraesCS7A01G277700.1	Wheat	cytosol	15.15	11.57

Protein Annotations

MapMan:18.12.1	Gene3D:2.40.100.10	InterPro:Cyclophilin-like_dom_sf	InterPro:Cyclophilin-type_PPIase	InterPro:Cyclophilin-type_PPIase_CS	InterPro:Cyclophilin-type_PPIase_dom
GO:GO:0000413	GO:GO:0003674	GO:GO:0003755	GO:GO:0003824	GO:GO:0005575	GO:GO:0006457
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009506	GO:GO:0009987	GO:GO:0019538
InterPro:IPR002130	InterPro:IPR029000	PFAM:PF00160	PRINTS:PR00153	ScanProsite:PS00170	PFscan:PS50072
PANTHER:PTHR11071	PANTHER:PTHR11071:SF152	SUPFAM:SSF50891	EnsemblPlantsGene:TraesCS3A01G209000	EnsemblPlants:TraesCS3A01G209000.1	TIGR:cd01925
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr3A:-:370243189..370250744

Molecular Weight (calculated)

56475.2 Da

IEP (calculated)

6.328

GRAVY (calculated)

-1.018

Length

495 amino acids

Sequence
(BLAST)

001: MSSVYVLEPP TKGKVVVQTT AGPIDIELWA KEAPKATRNF VQLCLEGYYD GTLFHRVIKS FLIQGGDPTG SGTGGESIYG APFADEFHSR LRFNHRGLLA
101: CANAGTPHSN GSQFFITLDR CDWLDKKNTI FGKVTGDSIF NLLALADIET DKDDRPVYPQ KILSVEVLWN PFDDIVPRQL KKIQPAPKAD AERKPEKKAV
201: KQLNVLSFGD EVEEEENEAA SFVKDKIKSI HDVLDDPRFL KVEPQVEQLS KEEEEKKNET VLSIREALIS KKAESREPEH DPENDDSPED ENEEDFDNRM
301: RSRILKKRRE LGDIRQSQSS KKDKTHQKDK ELPAHRSDDD DDDDDHQSSK SRKLSLKKKG IGSEANTERM SRGDVNLQLL NPAEQEKHLK KQRKRSLQGR
401: EEETLAKLQK FKASLMSNKP ANMETKAEDS EDYKEWHANR LTFAPESSKD GMTRKDDPND YVVVDPLLEK GKQKFNKMQA KLKKRDREWA GRSLT

Best Arabidopsis Sequence Match ( AT4G33060.1 )
(BLAST)

001: MSTVYVLEPP TKGKVIVNTT HGPIDVELWP KEAPKSVRNF VQLCLEGYFD NTIFHRVIPG FLVQGGDPTG SGTGGDSIYG GVFADEFHSR LRFSHRGIVA
101: MANASSPNSN GSQFFFTLDK CDWLDKKHTI FGKVTGDSIY NLLRLGEVDT SKDDRPLDPA PKILSVEVLW NPFEDIVPRV LAKTSEESAA EIKEPPTKPV
201: KKLNLLSFGE EAEEEEKELA VVKQKIKSSH DVLNDPRLLK AEASDKERNA SESKEVLSVR EALNAKKEAA QKDKSFSVSD TVGNSDDDDD GEDETKFDAK
301: MRNQVLSRRK EIGDTPSKPT QKKKSSSLKG REESTQRSDA VSSEDEKPRM EKLSLKKKGI GSEAKAEHME KGDTDLQLYN ASERARQLHK LKKRRLQGNE
401: DSVLAKLEKF KQSISAKPFT SSNEPVVLTS SSEPVDNKEE DLSDWKNVKL KFAPERGKDK MSRRDDPDAY MVVDPLLEKG KEKFNRMQAK QKRREREWSG
501: KSLA

Arabidopsis Description

CYP57Peptidyl-prolyl cis-trans isomerase CYP57 [Source:UniProtKB/Swiss-Prot;Acc:Q6Q152]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.