Factsheet for Os01t0582400-01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

nucleus 5
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

extracellular: 25047395

msms PMID: 25047395 doi

JY Kim, J Wu, SJ Kwon, H Oh, SE Lee, SG Kim, Y Wang, GK Agrawal, R Rakwal, KY Kang, IP Ahn, BG Kim, ST Kim

Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang, South Korea.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G209000.1	Wheat	nucleus	83.57	84.24
TraesCS3B01G239300.1	Wheat	nucleus	84.37	84.2
TraesCS3D01G211900.1	Wheat	nucleus	83.97	83.97
EES03161	Sorghum	nucleus	83.37	81.09
HORVU3Hr1G050400.5	Barley	cytosol, nucleus	58.92	75.19
Zm00001d044297_P002	Maize	nucleus	82.36	75.0
VIT_04s0008g01370.t01	Wine grape	cytosol	64.53	64.66
KRH05304	Soybean	nucleus	60.52	61.26
CDX68936	Canola	nucleus	56.71	60.6
GSMUA_Achr8P05680_001	Banana	endoplasmic reticulum	68.54	60.53
CDX75321	Canola	nucleus	58.72	59.55
Bra011410.1-P	Field mustard	nucleus	58.92	59.51
Solyc08g062700.2.1	Tomato	nucleus	58.32	59.15
AT4G33060.1	Thale cress	nucleus	58.72	58.13
Os08t0559400-01	Rice	cytosol, nucleus	15.63	47.56
Os06t0130500-01	Rice	cytosol	13.83	43.12
Os06t0670400-00	Rice	cytosol	19.04	20.26
Os06t0670500-01	Rice	cytosol	21.64	19.15
Os07t0476500-01	Rice	mitochondrion	8.22	17.45
Os03t0201100-01	Rice	cytosol	1.0	3.36
Os08t0557500-01	Rice	cytosol	1.2	1.19

Protein Annotations

MapMan:18.12.1	Gene3D:2.40.100.10	EntrezGene:4324199	ProteinID:BAF05327.1	ProteinID:BAS72872.1	ncoils:Coil
InterPro:Cyclophilin-like_dom_sf	InterPro:Cyclophilin-type_PPIase	InterPro:Cyclophilin-type_PPIase_CS	InterPro:Cyclophilin-type_PPIase_dom	ProteinID:EAZ12463.1	GO:GO:0000413
GO:GO:0003674	GO:GO:0003755	GO:GO:0003824	GO:GO:0005575	GO:GO:0006457	GO:GO:0006464
GO:GO:0008150	GO:GO:0008152	GO:GO:0009506	GO:GO:0009987	GO:GO:0016853	GO:GO:0019538
InterPro:IPR002130	InterPro:IPR029000	EnsemblPlantsGene:Os01g0582400	EnsemblPlants:Os01t0582400-01	PFAM:PF00160	PRINTS:PR00153
ScanProsite:PS00170	PFscan:PS50072	PANTHER:PTHR11071	PANTHER:PTHR11071:SF152	UniProt:Q0JLQ1	SUPFAM:SSF50891
UniParc:UPI000009CCB9	RefSeq:XP_015635328.1	RefSeq:XP_015635388.1	SEG:seg	:	:

Description

CYCLOPHILIN 57Similar to Multidomain cyclophilin type peptidyl-prolyl cis-trans isomerase. (Os01t0582400-01)

Coordinates

chr1:-:22591434..22596164

Molecular Weight (calculated)

56851.4 Da

IEP (calculated)

6.188

GRAVY (calculated)

-1.042

Length

499 amino acids

Sequence
(BLAST)

001: MSSVYVLEPP TKGKVVVQTT AGPLDIELWP KEAPKAVRNF VQLCLEGYYD GTLFHRVIKS FLVQGGDPTG SGTGGESIYG APFADEFHTR LRFNHRGLVA
101: CANAGTPHSN GSQFFISLDR CDWLDKKNTI FGKVTGDSIF NLLALADIET DKDDRPVYPQ KILSVEVLWN PFDDIVPRQL KKTEPTAKGD IEGKSKKKAV
201: KQLNVLSFGD EVEEEENEAA SSVKDKIKSI HDVLDDPRFL KGEAPDEQLT KEQEDKKKET VQSVREALVS KKSDFRELEH DSETDDYPDD ENEEDFDNRM
301: RSQILRKRRE LGDIRSSETS KKTDKAHRKD KELPVHRSDD DNDDDNEDHQ LTKSRKFSMK KKGIGSEASA ERMSKGDANL QLLNPAEQEK HLQKQKRRRL
401: QGREDETLAK LQKFKASFLS KNPATGNTEK KTDEEDYTGW HSNRLTFEPD SSKDGMTRKD DPDDYVVVDP LLEKGKQKFN KMQAKLKRRE REWAGRSLT

Best Arabidopsis Sequence Match ( AT4G33060.1 )
(BLAST)

001: MSTVYVLEPP TKGKVIVNTT HGPIDVELWP KEAPKSVRNF VQLCLEGYFD NTIFHRVIPG FLVQGGDPTG SGTGGDSIYG GVFADEFHSR LRFSHRGIVA
101: MANASSPNSN GSQFFFTLDK CDWLDKKHTI FGKVTGDSIY NLLRLGEVDT SKDDRPLDPA PKILSVEVLW NPFEDIVPRV LAKTSEESAA EIKEPPTKPV
201: KKLNLLSFGE EAEEEEKELA VVKQKIKSSH DVLNDPRLLK AEASDKERNA SESKEVLSVR EALNAKKEAA QKDKSFSVSD TVGNSDDDDD GEDETKFDAK
301: MRNQVLSRRK EIGDTPSKPT QKKKSSSLKG REESTQRSDA VSSEDEKPRM EKLSLKKKGI GSEAKAEHME KGDTDLQLYN ASERARQLHK LKKRRLQGNE
401: DSVLAKLEKF KQSISAKPFT SSNEPVVLTS SSEPVDNKEE DLSDWKNVKL KFAPERGKDK MSRRDDPDAY MVVDPLLEKG KEKFNRMQAK QKRREREWSG
501: KSLA

Arabidopsis Description

CYP57Peptidyl-prolyl cis-trans isomerase CYP57 [Source:UniProtKB/Swiss-Prot;Acc:Q6Q152]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.