Factsheet for Bra011410.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX75321	Canola	nucleus	99.6	100.0
CDX68936	Canola	nucleus	91.7	97.0
AT4G33060.1	Thale cress	nucleus	88.06	86.31
KRH05304	Soybean	nucleus	67.61	67.75
VIT_04s0008g01370.t01	Wine grape	cytosol	65.38	64.86
Solyc08g062700.2.1	Tomato	nucleus	64.57	64.84
Os01t0582400-01	Rice	extracellular	59.51	58.92
TraesCS3B01G239300.1	Wheat	nucleus	59.11	58.4
TraesCS3A01G209000.1	Wheat	nucleus	58.5	58.38
EES03161	Sorghum	nucleus	60.12	57.89
TraesCS3D01G211900.1	Wheat	nucleus	58.1	57.52
Zm00001d044297_P002	Maize	nucleus	59.92	54.01
HORVU3Hr1G050400.5	Barley	cytosol, nucleus	42.31	53.45
GSMUA_Achr8P05680_001	Banana	endoplasmic reticulum	60.73	53.1
Bra032657.1-P	Field mustard	cytosol	15.59	48.12
Bra005297.1-P	Field mustard	cytosol	15.18	45.73
Bra030819.1-P	Field mustard	cytosol	20.45	18.57
Bra029595.1-P	Field mustard	mitochondrion, plastid	7.29	15.25
Bra024442.1-P	Field mustard	cytosol	18.22	15.08
Bra019430.1-P	Field mustard	cytosol	16.19	12.86

Protein Annotations

MapMan:18.12.1	Gene3D:2.40.100.10	EnsemblPlantsGene:Bra011410	EnsemblPlants:Bra011410.1	EnsemblPlants:Bra011410.1-P	ncoils:Coil
InterPro:Cyclophilin-like_dom_sf	InterPro:Cyclophilin-type_PPIase	InterPro:Cyclophilin-type_PPIase_CS	InterPro:Cyclophilin-type_PPIase_dom	GO:GO:0000413	GO:GO:0003674
GO:GO:0003755	GO:GO:0003824	GO:GO:0005575	GO:GO:0006457	GO:GO:0006464	GO:GO:0008150
GO:GO:0008152	GO:GO:0009506	GO:GO:0009987	GO:GO:0016853	GO:GO:0019538	InterPro:IPR002130
InterPro:IPR029000	UniProt:M4D4K6	PFAM:PF00160	PRINTS:PR00153	ScanProsite:PS00170	PFscan:PS50072
PANTHER:PTHR11071	PANTHER:PTHR11071:SF152	SUPFAM:SSF50891	UniParc:UPI0002545EA4	SEG:seg	:

Description

AT4G33060 (E=2e-165) | peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein

Coordinates

chrA01:-:2288173..2291086

Molecular Weight (calculated)

55529.7 Da

IEP (calculated)

8.212

GRAVY (calculated)

-0.870

Length

494 amino acids

Sequence
(BLAST)

001: MSTIYVLEPP TKGKVIVNTT HGPIDIELWP KEAPKSVRNF VQLCLEGYFD DTIFHRVIPG FLVQGGDPTG SGTGGESIYG GVFADEFHSR LRFNHRGIVA
101: MANESSPNTN GSQFFFTLDK CDWLDKKHTI FGKVTGDSIF NLLRLGEIDT GKDDRPLDPA PKILSVEVLW NPFEDIVPRV LAKASHAPVD EVKEPPRKPV
201: KKLNLLSFGE EAEEEEKELA AVKQKIKSSH DVLNDPRLLK AESTNKERNA SDSKEVLSVR EALGSKKENA QKEKSWPVSD PVGHSDDDDD DGDETKFDAK
301: MRNQVLSRRK EMGDIPPKPT QKKKSSSVKA PEESIKRSDV SSSEDEKPKM EKLSLKKKGI GSEAKAERLE NGDADLQLYN ASERARQLHK LKKRRMQGNE
401: DAVLAKLEKF KQSISAKPFG SSSEPVDNME EDVSDWKKVK LKFAPEHGKD KMRKEDPDAY VVVDPLLEKG KEKFNRIQAK QKRREREWSG KSLA

Best Arabidopsis Sequence Match ( AT4G33060.1 )
(BLAST)

001: MSTVYVLEPP TKGKVIVNTT HGPIDVELWP KEAPKSVRNF VQLCLEGYFD NTIFHRVIPG FLVQGGDPTG SGTGGDSIYG GVFADEFHSR LRFSHRGIVA
101: MANASSPNSN GSQFFFTLDK CDWLDKKHTI FGKVTGDSIY NLLRLGEVDT SKDDRPLDPA PKILSVEVLW NPFEDIVPRV LAKTSEESAA EIKEPPTKPV
201: KKLNLLSFGE EAEEEEKELA VVKQKIKSSH DVLNDPRLLK AEASDKERNA SESKEVLSVR EALNAKKEAA QKDKSFSVSD TVGNSDDDDD GEDETKFDAK
301: MRNQVLSRRK EIGDTPSKPT QKKKSSSLKG REESTQRSDA VSSEDEKPRM EKLSLKKKGI GSEAKAEHME KGDTDLQLYN ASERARQLHK LKKRRLQGNE
401: DSVLAKLEKF KQSISAKPFT SSNEPVVLTS SSEPVDNKEE DLSDWKNVKL KFAPERGKDK MSRRDDPDAY MVVDPLLEKG KEKFNRMQAK QKRREREWSG
501: KSLA

Arabidopsis Description

CYP57Peptidyl-prolyl cis-trans isomerase CYP57 [Source:UniProtKB/Swiss-Prot;Acc:Q6Q152]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.