Factsheet for Bra029595.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 3
mitochondrion 4
endoplasmic reticulum 1
cytosol 1
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY24675	Canola	endoplasmic reticulum, mitochondrion, plastid	93.22	94.02
AT3G66654.3	Thale cress	plastid	83.47	83.47
GSMUA_Achr5P15930_001	Banana	mitochondrion	59.32	59.83
KRH49483	Soybean	mitochondrion	54.66	57.33
KRG89165	Soybean	endoplasmic reticulum	55.51	56.96
GSMUA_Achr10P...	Banana	endoplasmic reticulum	56.36	56.84
Zm00001d021332_P002	Maize	mitochondrion	55.93	56.65
KXG36207	Sorghum	mitochondrion	55.93	56.65
KRH34786	Soybean	endoplasmic reticulum	54.66	55.6
VIT_05s0077g01040.t01	Wine grape	cytosol, endoplasmic reticulum, nucleus	66.53	55.48
Solyc09g008410.2.1	Tomato	plastid	54.24	54.24
Solyc10g083930.1.1	Tomato	nucleus	52.54	53.91
TraesCS2B01G255000.1	Wheat	mitochondrion	52.97	53.65
Os07t0476500-01	Rice	mitochondrion	53.39	53.62
PGSC0003DMT400072698	Potato	mitochondrion, plastid	52.12	53.48
PGSC0003DMT400009946	Potato	mitochondrion	53.39	53.39
TraesCS2D01G237600.1	Wheat	mitochondrion	51.27	51.93
KRG91995	Soybean	endoplasmic reticulum, mitochondrion, plastid	55.08	44.52
HORVU2Hr1G054470.1	Barley	plastid	41.53	38.43
Bra032657.1-P	Field mustard	cytosol	18.22	26.88
Bra005297.1-P	Field mustard	cytosol	17.37	25.0
Bra019430.1-P	Field mustard	cytosol	25.42	9.65
Bra024442.1-P	Field mustard	cytosol	21.19	8.38
Bra011410.1-P	Field mustard	nucleus	15.25	7.29
Bra030819.1-P	Field mustard	cytosol	16.1	6.99

Protein Annotations

MapMan:18.12.1	Gene3D:2.40.100.10	EnsemblPlantsGene:Bra029595	EnsemblPlants:Bra029595.1	EnsemblPlants:Bra029595.1-P	InterPro:Cyclophilin-like_dom_sf
InterPro:Cyclophilin-type_PPIase	InterPro:Cyclophilin-type_PPIase_dom	GO:GO:0000413	GO:GO:0003674	GO:GO:0003755	GO:GO:0003824
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005768	GO:GO:0005794
GO:GO:0005802	GO:GO:0005886	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016853	GO:GO:0019538	InterPro:IPR002130	InterPro:IPR029000
UniProt:M4ELC7	PFAM:PF00160	PIRSF:PIRSF001467	PRINTS:PR00153	PFscan:PS50072	PANTHER:PTHR11071
PANTHER:PTHR11071:SF200	SUPFAM:SSF50891	TMHMM:TMhelix	UniParc:UPI00025480AD	SEG:seg	:

Description

AT3G66654 (E=6e-101) | peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein

Coordinates

chrA05:-:23084411..23085841

Molecular Weight (calculated)

26460.2 Da

IEP (calculated)

9.354

GRAVY (calculated)

-0.158

Length

236 amino acids

Sequence
(BLAST)

001: MARIKPQALL NQSKKKKGPS RISISTIVVC NLVVAVVVLS LVTTYRHWSQ SDRVLILMNL LCVAFQDTNA VSQQKNYDLP GYADISTSKG LITVELFKDA
101: SPEAVDKFLD LCKKDHFKGM PFHRVIKNYL VQAGHSSSSI PIEEWTAKGK LRGRLDTSPK HEAFMLGTPK NKGNNKDFEL LITTAPIPDL NYQLIVFGRV
201: LKGEDVVQEI EEVDTDEHFQ PKSQIGIISI VLKREL

Best Arabidopsis Sequence Match ( AT3G66654.4 )
(BLAST)

001: MAKIKPQALL NQSKKKKGPS RISISTIIVC NLVVAVVILS LVTTYRHWSQ RSRNTIEHET RSQRFEDTNT ASGQKTYDLP GFADINTSKG LITVELFKEG
101: SPEVVDKFLD LCQKDHFKGM PFQRVIKNYL VQAGHSPSSI PVEEWTAKGK LRGRLHIGPK HEAFMLGTPK NKGNNKDFEL LITTAPIPDL NDQLIVFGRV
201: LKGEDVVQEI EEVDTDEHFQ PKSPIGITGV VLKLET

Arabidopsis Description

CYP21-4Peptidyl-prolyl cis-trans isomerase CYP21-4 [Source:UniProtKB/Swiss-Prot;Acc:Q9C835]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.