Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 4
- endoplasmic reticulum 1
- cytosol 1
- golgi 1
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Solyc10g083930.1.1 | Tomato | nucleus | 93.91 | 93.91 |
PGSC0003DMT400009946 | Potato | mitochondrion | 80.87 | 78.81 |
KRH34786 | Soybean | endoplasmic reticulum | 60.43 | 59.91 |
KRH49483 | Soybean | mitochondrion | 57.39 | 58.67 |
KRG89165 | Soybean | endoplasmic reticulum | 56.96 | 56.96 |
CDY05284 | Canola | endoplasmic reticulum, mitochondrion, plastid | 55.22 | 54.27 |
GSMUA_Achr10P... | Banana | endoplasmic reticulum | 55.22 | 54.27 |
GSMUA_Achr5P15930_001 | Banana | mitochondrion | 55.22 | 54.27 |
CDY24675 | Canola | endoplasmic reticulum, mitochondrion, plastid | 54.35 | 53.42 |
AT3G66654.3 | Thale cress | plastid | 53.91 | 52.54 |
Bra029595.1-P | Field mustard | mitochondrion, plastid | 53.48 | 52.12 |
Zm00001d021332_P002 | Maize | mitochondrion | 52.17 | 51.5 |
KXG36207 | Sorghum | mitochondrion | 52.17 | 51.5 |
VIT_05s0077g01040.t01 | Wine grape | cytosol, endoplasmic reticulum, nucleus | 62.17 | 50.53 |
Os07t0476500-01 | Rice | mitochondrion | 50.87 | 49.79 |
TraesCS2B01G255000.1 | Wheat | mitochondrion | 47.83 | 47.21 |
TraesCS2D01G237600.1 | Wheat | mitochondrion | 47.83 | 47.21 |
KRG91995 | Soybean | endoplasmic reticulum, mitochondrion, plastid | 59.57 | 46.92 |
HORVU2Hr1G054470.1 | Barley | plastid | 39.57 | 35.69 |
PGSC0003DMT400038471 | Potato | cytosol | 19.57 | 28.12 |
PGSC0003DMT400022853 | Potato | cytosol | 19.57 | 27.44 |
PGSC0003DMT400019171 | Potato | cytosol | 30.0 | 11.11 |
PGSC0003DMT400056014 | Potato | cytosol | 8.26 | 10.56 |
PGSC0003DMT400055240 | Potato | cytosol | 23.04 | 8.89 |
PGSC0003DMT400011164 | Potato | cytosol | 5.65 | 7.03 |
PGSC0003DMT400069100 | Potato | cytosol | 8.7 | 5.83 |
PGSC0003DMT400011166 | Potato | nucleus | 7.39 | 5.82 |
PGSC0003DMT400043897 | Potato | cytoskeleton, cytosol, nucleus | 2.17 | 2.59 |
Protein Annotations
EntrezGene:102588402 | MapMan:18.12.1 | Gene3D:2.40.100.10 | InterPro:Cyclophilin-like_dom_sf | InterPro:Cyclophilin-type_PPIase | InterPro:Cyclophilin-type_PPIase_dom |
GO:GO:0000413 | GO:GO:0003674 | GO:GO:0003755 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0006464 |
GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016853 |
GO:GO:0019538 | InterPro:IPR002130 | InterPro:IPR029000 | UniProt:M1CQS8 | PFAM:PF00160 | EnsemblPlantsGene:PGSC0003DMG400028285 |
PGSC:PGSC0003DMG400028285 | EnsemblPlants:PGSC0003DMT400072698 | PIRSF:PIRSF001467 | PRINTS:PR00153 | PFscan:PS50072 | PANTHER:PTHR11071 |
PANTHER:PTHR11071:SF200 | SUPFAM:SSF50891 | TMHMM:TMhelix | UniParc:UPI000294FE04 | RefSeq:XP_006339089.1 | SEG:seg |
Description
Peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein [Source:PGSC_GENE;Acc:PGSC0003DMG400028285]
Coordinates
chr10:+:55189691..55194031
Molecular Weight (calculated)
26152.4 Da
IEP (calculated)
9.884
GRAVY (calculated)
-0.408
Length
230 amino acids
Sequence
(BLAST)
(BLAST)
001: MARIKPQALL LQSKKKKAPS GVSVPTIIVY FLIVAVMVFS LFSTYKYWAR RSIVQTRDSI SNRKFIERKK SDIPNYALIS TSKGQITVEL YKDGSPDIVN
101: EFIDFSQNGH FKGMHFTRVI KNFVIQGSKI ENPEATEDWT SRGKHYSQLD TSLKHEAFML GTSKAKHEGG GFDLFITTAP IPDLNDKINV FGRVIKGEDA
201: VQEIEEVDTD DHYRPKTPVQ INEVTLRHKT
101: EFIDFSQNGH FKGMHFTRVI KNFVIQGSKI ENPEATEDWT SRGKHYSQLD TSLKHEAFML GTSKAKHEGG GFDLFITTAP IPDLNDKINV FGRVIKGEDA
201: VQEIEEVDTD DHYRPKTPVQ INEVTLRHKT
001: MAKIKPQALL NQSKKKKGPS RISISTIIVC NLVVAVVILS LVTTYRHWSQ RSRNTIEHET RSQRFEDTNT ASGQKTYDLP GFADINTSKG LITVELFKEG
101: SPEVVDKFLD LCQKDHFKGM PFQRVIKNYL VQAGHSPSSI PVEEWTAKGK LRGRLHIGPK HEAFMLGTPK NKGNNKDFEL LITTAPIPDL NDQLIVFGRV
201: LKGEDVVQEI EEVDTDEHFQ PKSPIGITGV VLKLET
101: SPEVVDKFLD LCQKDHFKGM PFQRVIKNYL VQAGHSPSSI PVEEWTAKGK LRGRLHIGPK HEAFMLGTPK NKGNNKDFEL LITTAPIPDL NDQLIVFGRV
201: LKGEDVVQEI EEVDTDEHFQ PKSPIGITGV VLKLET
Arabidopsis Description
CYP21-4Peptidyl-prolyl cis-trans isomerase CYP21-4 [Source:UniProtKB/Swiss-Prot;Acc:Q9C835]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.