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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, plastid

Predictor Summary:
  • plastid 4
  • mitochondrion 4
  • endoplasmic reticulum 1
  • cytosol 1
  • golgi 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc10g083930.1.1 Tomato nucleus 93.91 93.91
PGSC0003DMT400009946 Potato mitochondrion 80.87 78.81
KRH34786 Soybean endoplasmic reticulum 60.43 59.91
KRH49483 Soybean mitochondrion 57.39 58.67
KRG89165 Soybean endoplasmic reticulum 56.96 56.96
CDY05284 Canola endoplasmic reticulum, mitochondrion, plastid 55.22 54.27
GSMUA_Achr10P... Banana endoplasmic reticulum 55.22 54.27
GSMUA_Achr5P15930_001 Banana mitochondrion 55.22 54.27
CDY24675 Canola endoplasmic reticulum, mitochondrion, plastid 54.35 53.42
AT3G66654.3 Thale cress plastid 53.91 52.54
Bra029595.1-P Field mustard mitochondrion, plastid 53.48 52.12
Zm00001d021332_P002 Maize mitochondrion 52.17 51.5
KXG36207 Sorghum mitochondrion 52.17 51.5
VIT_05s0077g01040.t01 Wine grape cytosol, endoplasmic reticulum, nucleus 62.17 50.53
Os07t0476500-01 Rice mitochondrion 50.87 49.79
TraesCS2B01G255000.1 Wheat mitochondrion 47.83 47.21
TraesCS2D01G237600.1 Wheat mitochondrion 47.83 47.21
KRG91995 Soybean endoplasmic reticulum, mitochondrion, plastid 59.57 46.92
HORVU2Hr1G054470.1 Barley plastid 39.57 35.69
PGSC0003DMT400038471 Potato cytosol 19.57 28.12
PGSC0003DMT400022853 Potato cytosol 19.57 27.44
PGSC0003DMT400019171 Potato cytosol 30.0 11.11
PGSC0003DMT400056014 Potato cytosol 8.26 10.56
PGSC0003DMT400055240 Potato cytosol 23.04 8.89
PGSC0003DMT400011164 Potato cytosol 5.65 7.03
PGSC0003DMT400069100 Potato cytosol 8.7 5.83
PGSC0003DMT400011166 Potato nucleus 7.39 5.82
PGSC0003DMT400043897 Potato cytoskeleton, cytosol, nucleus 2.17 2.59
Protein Annotations
EntrezGene:102588402MapMan:18.12.1Gene3D:2.40.100.10InterPro:Cyclophilin-like_dom_sfInterPro:Cyclophilin-type_PPIaseInterPro:Cyclophilin-type_PPIase_dom
GO:GO:0000413GO:GO:0003674GO:GO:0003755GO:GO:0003824GO:GO:0005575GO:GO:0006464
GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0016853
GO:GO:0019538InterPro:IPR002130InterPro:IPR029000UniProt:M1CQS8PFAM:PF00160EnsemblPlantsGene:PGSC0003DMG400028285
PGSC:PGSC0003DMG400028285EnsemblPlants:PGSC0003DMT400072698PIRSF:PIRSF001467PRINTS:PR00153PFscan:PS50072PANTHER:PTHR11071
PANTHER:PTHR11071:SF200SUPFAM:SSF50891TMHMM:TMhelixUniParc:UPI000294FE04RefSeq:XP_006339089.1SEG:seg
Description
Peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein [Source:PGSC_GENE;Acc:PGSC0003DMG400028285]
Coordinates
chr10:+:55189691..55194031
Molecular Weight (calculated)
26152.4 Da
IEP (calculated)
9.884
GRAVY (calculated)
-0.408
Length
230 amino acids
Sequence
(BLAST)
001: MARIKPQALL LQSKKKKAPS GVSVPTIIVY FLIVAVMVFS LFSTYKYWAR RSIVQTRDSI SNRKFIERKK SDIPNYALIS TSKGQITVEL YKDGSPDIVN
101: EFIDFSQNGH FKGMHFTRVI KNFVIQGSKI ENPEATEDWT SRGKHYSQLD TSLKHEAFML GTSKAKHEGG GFDLFITTAP IPDLNDKINV FGRVIKGEDA
201: VQEIEEVDTD DHYRPKTPVQ INEVTLRHKT
Best Arabidopsis Sequence Match ( AT3G66654.4 )
(BLAST)
001: MAKIKPQALL NQSKKKKGPS RISISTIIVC NLVVAVVILS LVTTYRHWSQ RSRNTIEHET RSQRFEDTNT ASGQKTYDLP GFADINTSKG LITVELFKEG
101: SPEVVDKFLD LCQKDHFKGM PFQRVIKNYL VQAGHSPSSI PVEEWTAKGK LRGRLHIGPK HEAFMLGTPK NKGNNKDFEL LITTAPIPDL NDQLIVFGRV
201: LKGEDVVQEI EEVDTDEHFQ PKSPIGITGV VLKLET
Arabidopsis Description
CYP21-4Peptidyl-prolyl cis-trans isomerase CYP21-4 [Source:UniProtKB/Swiss-Prot;Acc:Q9C835]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.