Factsheet for GSMUA_Achr5P15930_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 4
endoplasmic reticulum 1
cytosol 1
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	endoplasmic reticulum	80.34	80.34
CDY05284	Canola	endoplasmic reticulum, mitochondrion, plastid	61.54	61.54
CDY24675	Canola	endoplasmic reticulum, mitochondrion, plastid	60.68	60.68
Os07t0476500-01	Rice	mitochondrion	60.68	60.43
KXG36207	Sorghum	mitochondrion	59.4	59.66
Bra029595.1-P	Field mustard	mitochondrion, plastid	59.83	59.32
Solyc09g008410.2.1	Tomato	plastid	59.83	59.32
Zm00001d021332_P002	Maize	mitochondrion	58.97	59.23
AT3G66654.3	Thale cress	plastid	59.4	58.9
PGSC0003DMT400009946	Potato	mitochondrion	59.4	58.9
KRH34786	Soybean	endoplasmic reticulum	57.27	57.76
TraesCS2B01G255000.1	Wheat	mitochondrion	57.27	57.51
KRH49483	Soybean	mitochondrion	55.13	57.33
TraesCS2D01G237600.1	Wheat	mitochondrion	56.84	57.08
VIT_05s0077g01040.t01	Wine grape	cytosol, endoplasmic reticulum, nucleus	68.8	56.89
Solyc10g083930.1.1	Tomato	nucleus	55.56	56.52
KRG89165	Soybean	endoplasmic reticulum	54.7	55.65
PGSC0003DMT400072698	Potato	mitochondrion, plastid	54.27	55.22
KRG91995	Soybean	endoplasmic reticulum, mitochondrion, plastid	56.84	45.55
HORVU2Hr1G054470.1	Barley	plastid	45.3	41.57
GSMUA_Achr8P32900_001	Banana	cytosol	17.52	25.0
GSMUA_Achr1P17040_001	Banana	cytosol	27.78	10.38
GSMUA_Achr1P22460_001	Banana	cytosol	21.79	8.57
GSMUA_Achr8P05680_001	Banana	endoplasmic reticulum	16.67	6.9
GSMUA_Achr10P...	Banana	cytosol	15.38	6.5

Protein Annotations

MapMan:18.12.1	Gene3D:2.40.100.10	ncoils:Coil	InterPro:Cyclophilin-like_dom_sf	InterPro:Cyclophilin-type_PPIase	InterPro:Cyclophilin-type_PPIase_dom
GO:GO:0000413	GO:GO:0003674	GO:GO:0003755	GO:GO:0003824	GO:GO:0005575	GO:GO:0006464
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016853
GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr5G15930_001	EnsemblPlants:GSMUA_Achr5P15930_001	EnsemblPlants:GSMUA_Achr5T15930_001	InterPro:IPR002130	InterPro:IPR029000
UniProt:M0SYX2	PFAM:PF00160	PIRSF:PIRSF001467	PRINTS:PR00153	PFscan:PS50072	PANTHER:PTHR11071
PANTHER:PTHR11071:SF200	SUPFAM:SSF50891	TMHMM:TMhelix	UniParc:UPI000295802C	:	:

Description

Peptidyl-prolyl cis-trans isomerase CYP21-3, mitochondrial [Source:GMGC_GENE;Acc:GSMUA_Achr5G15930_001]

Coordinates

chr5:+:12462545..12485652

Molecular Weight (calculated)

26339.8 Da

IEP (calculated)

9.026

GRAVY (calculated)

-0.246

Length

234 amino acids

Sequence
(BLAST)

001: MAKIKPQALL LQSKKKKGPT RISLSTIVSC NVIVILIVLS LYATFRHWYH RSNDQLGTGL ETFEHSEIFG ESTRSDLPSY AIFSTAKGLI TIELNKDSSR
101: DVVDKFVDLC RKGYFKGMLF DHVIKNFVIQ GAHSQRSGVA EDWIPKGKAH SRLGISPKHE AFVLGTRKPN KDSKEFELFI TTAPIPDLNE KLMVFGRVIK
201: GEDVVQEIEE VDTDEHYRPK SPVGIIDIAL KQEA

Best Arabidopsis Sequence Match ( AT3G66654.4 )
(BLAST)

001: MAKIKPQALL NQSKKKKGPS RISISTIIVC NLVVAVVILS LVTTYRHWSQ RSRNTIEHET RSQRFEDTNT ASGQKTYDLP GFADINTSKG LITVELFKEG
101: SPEVVDKFLD LCQKDHFKGM PFQRVIKNYL VQAGHSPSSI PVEEWTAKGK LRGRLHIGPK HEAFMLGTPK NKGNNKDFEL LITTAPIPDL NDQLIVFGRV
201: LKGEDVVQEI EEVDTDEHFQ PKSPIGITGV VLKLET

Arabidopsis Description

CYP21-4Peptidyl-prolyl cis-trans isomerase CYP21-4 [Source:UniProtKB/Swiss-Prot;Acc:Q9C835]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.